RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 C10orf55Q5SWW7 151 aa17.91■□□□□ 0.46
SMPD1-209ENST00000533196 VKORC1L1Q8N0U8 176 aa17.91■□□□□ 0.46
SMPD1-209ENST00000533196 SLC5A7Q9GZV3 580 aa17.91■□□□□ 0.46
SMPD1-209ENST00000533196 BET1LQ9NYM9 111 aa17.91■□□□□ 0.46
SMPD1-209ENST00000533196 KMT2CQ8NEZ4 4911 aaKnown RBP17.9■□□□□ 0.46
SMPD1-209ENST00000533196 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.9■□□□□ 0.46
SMPD1-209ENST00000533196 TRIM64CA6NLI5 447 aa17.9■□□□□ 0.46
SMPD1-209ENST00000533196 TRBV12-3P01733 135 aa17.9■□□□□ 0.46
SMPD1-209ENST00000533196 ZNF735P0CB33 412 aa17.9■□□□□ 0.46
SMPD1-209ENST00000533196 EXOSC2Q13868 293 aaKnown RBP17.9■□□□□ 0.46
SMPD1-209ENST00000533196 IL34Q6ZMJ4 242 aa17.9■□□□□ 0.46
SMPD1-209ENST00000533196 SPAG16Q8N0X2 631 aa17.9■□□□□ 0.46
SMPD1-209ENST00000533196 KCTD12Q96CX2 325 aaKnown RBP17.9■□□□□ 0.46
SMPD1-209ENST00000533196 IFT46Q9NQC8 304 aa17.9■□□□□ 0.46
SMPD1-209ENST00000533196 SLC2A9Q9NRM0 540 aa17.9■□□□□ 0.46
SMPD1-209ENST00000533196 PEMTQ9UBM1 199 aa17.9■□□□□ 0.46
SMPD1-209ENST00000533196 DPPA5A6NC42 116 aa17.89■□□□□ 0.45
SMPD1-209ENST00000533196 A8MZ25 164 aa17.89■□□□□ 0.45
SMPD1-209ENST00000533196 TEX22C9J3V5 150 aa17.89■□□□□ 0.45
SMPD1-209ENST00000533196 IL6RP08887 468 aaPredicted RBP17.89■□□□□ 0.45
SMPD1-209ENST00000533196 FRMD6-AS1P0C7T7 363 aa17.89■□□□□ 0.45
SMPD1-209ENST00000533196 PTHLHP12272 177 aa17.89■□□□□ 0.45
SMPD1-209ENST00000533196 TGFBR1P36897 503 aa17.89■□□□□ 0.45
SMPD1-209ENST00000533196 RPL8P62917 257 aaKnown RBP17.89■□□□□ 0.45
SMPD1-209ENST00000533196 ANAPC10Q9UM13 185 aa17.89■□□□□ 0.45
SMPD1-209ENST00000533196 TNFSF12O43508 249 aa17.88■□□□□ 0.45
SMPD1-209ENST00000533196 DHFRP00374 187 aa17.88■□□□□ 0.45
SMPD1-209ENST00000533196 HPRT1P00492 218 aa17.88■□□□□ 0.45
SMPD1-209ENST00000533196 PRH1P02810 166 aa17.88■□□□□ 0.45
SMPD1-209ENST00000533196 CRYGCP07315 174 aa17.88■□□□□ 0.45
SMPD1-209ENST00000533196 TAS2R31P59538 309 aa17.88■□□□□ 0.45
SMPD1-209ENST00000533196 POU2AF1Q16633 256 aa17.88■□□□□ 0.45
SMPD1-209ENST00000533196 KLK9Q2XQG4 91 aa17.88■□□□□ 0.45
SMPD1-209ENST00000533196 TMEM69Q5SWH9 247 aa17.88■□□□□ 0.45
SMPD1-209ENST00000533196 SBSPONQ8IVN8 264 aa17.88■□□□□ 0.45
SMPD1-209ENST00000533196 SAMD12Q8N8I0 201 aa17.88■□□□□ 0.45
SMPD1-209ENST00000533196 CD300LFQ8TDQ1 290 aa17.88■□□□□ 0.45
SMPD1-209ENST00000533196 KLK9Q9UKQ9 250 aa17.88■□□□□ 0.45
SMPD1-209ENST00000533196 HMX3A6NHT5 357 aa17.87■□□□□ 0.45
SMPD1-209ENST00000533196 CSN3P07498 182 aa17.87■□□□□ 0.45
SMPD1-209ENST00000533196 FGF2P09038 288 aa17.87■□□□□ 0.45
SMPD1-209ENST00000533196 FXYD4P59646 89 aa17.87■□□□□ 0.45
SMPD1-209ENST00000533196 HERV-K104P61576 105 aa17.87■□□□□ 0.45
SMPD1-209ENST00000533196 C15orf32Q32M92 178 aa17.87■□□□□ 0.45
SMPD1-209ENST00000533196 DHRS11Q6UWP2 260 aa17.87■□□□□ 0.45
SMPD1-209ENST00000533196 ZNF818PQ6ZRF7 136 aa17.87■□□□□ 0.45
SMPD1-209ENST00000533196 HAPLN4Q86UW8 402 aa17.87■□□□□ 0.45
SMPD1-209ENST00000533196 SGPP2Q8IWX5 399 aa17.87■□□□□ 0.45
SMPD1-209ENST00000533196 Q8N1Y9 231 aa17.87■□□□□ 0.45
SMPD1-209ENST00000533196 Q8N402 240 aa17.87■□□□□ 0.45
SMPD1-209ENST00000533196 OR2K2Q8NGT1 345 aa17.87■□□□□ 0.45
SMPD1-209ENST00000533196 CMTM3Q96MX0 182 aa17.87■□□□□ 0.45
SMPD1-209ENST00000533196 FYTTD1Q96QD9 318 aaKnown RBP17.87■□□□□ 0.45
SMPD1-209ENST00000533196 GPHA2Q96T91 129 aa17.87■□□□□ 0.45
SMPD1-209ENST00000533196 BMPR1BO00238 502 aa17.86■□□□□ 0.45
SMPD1-209ENST00000533196 NQO2P16083 231 aa17.86■□□□□ 0.45
SMPD1-209ENST00000533196 HLA-GP17693 338 aa17.86■□□□□ 0.45
SMPD1-209ENST00000533196 NAT1P18440 290 aa17.86■□□□□ 0.45
SMPD1-209ENST00000533196 TAS2R46P59540 309 aa17.86■□□□□ 0.45
SMPD1-209ENST00000533196 TAS2R20P59543 309 aa17.86■□□□□ 0.45
SMPD1-209ENST00000533196 OR4A47Q6IF82 309 aa17.86■□□□□ 0.45
SMPD1-209ENST00000533196 LCN12Q6JVE5 192 aa17.86■□□□□ 0.45
SMPD1-209ENST00000533196 SSX9Q7RTT3 188 aa17.86■□□□□ 0.45
SMPD1-209ENST00000533196 SLC25A46Q96AG3 418 aa17.86■□□□□ 0.45
SMPD1-209ENST00000533196 PLEKHA2Q9HB19 425 aa17.86■□□□□ 0.45
SMPD1-209ENST00000533196 EHFQ9NZC4 300 aa17.86■□□□□ 0.45
SMPD1-209ENST00000533196 MEIS3P1A6NDR6 274 aa17.85■□□□□ 0.45
SMPD1-209ENST00000533196 SULT1C2O00338 296 aa17.85■□□□□ 0.45
SMPD1-209ENST00000533196 OR2J3O76001 311 aa17.85■□□□□ 0.45
SMPD1-209ENST00000533196 FCER2P06734 321 aa17.85■□□□□ 0.45
SMPD1-209ENST00000533196 HIST1H1BP16401 226 aaKnown RBP17.85■□□□□ 0.45
SMPD1-209ENST00000533196 PSMB6P28072 239 aa17.85■□□□□ 0.45
SMPD1-209ENST00000533196 LSM3P62310 102 aaKnown RBP17.85■□□□□ 0.45
SMPD1-209ENST00000533196 ZMAT4Q9H898 229 aa17.85■□□□□ 0.45
SMPD1-209ENST00000533196 ADAM30Q9UKF2 790 aa17.85■□□□□ 0.45
SMPD1-209ENST00000533196 E7EUB6 86 aa17.84■□□□□ 0.45
SMPD1-209ENST00000533196 CTRB1P17538 263 aa17.84■□□□□ 0.45
SMPD1-209ENST00000533196 MECP2P51608 486 aaKnown RBP17.84■□□□□ 0.45
SMPD1-209ENST00000533196 AADACL3Q5VUY0 350 aa17.84■□□□□ 0.45
SMPD1-209ENST00000533196 CTRB2Q6GPI1 263 aa17.84■□□□□ 0.45
SMPD1-209ENST00000533196 TMEM17Q86X19 198 aa17.84■□□□□ 0.45
SMPD1-209ENST00000533196 MOB3AQ96BX8 217 aa17.84■□□□□ 0.45
SMPD1-209ENST00000533196 RCHY1Q96PM5 261 aa17.84■□□□□ 0.45
SMPD1-209ENST00000533196 SRSF8Q9BRL6 282 aaKnown RBP17.84■□□□□ 0.45
SMPD1-209ENST00000533196 HRASLSQ9HDD0 168 aa17.84■□□□□ 0.45
SMPD1-209ENST00000533196 C19orf73Q9NVV2 129 aa17.84■□□□□ 0.45
SMPD1-209ENST00000533196 COMMD9Q9P000 198 aa17.84■□□□□ 0.45
SMPD1-209ENST00000533196 FBXL7Q9UJT9 491 aa17.84■□□□□ 0.45
SMPD1-209ENST00000533196 A0A1B0GW64 132 aa17.83■□□□□ 0.44
SMPD1-209ENST00000533196 GGCTO75223 188 aaKnown RBP17.83■□□□□ 0.44
SMPD1-209ENST00000533196 IGHV4-30-4P0DP06 118 aa17.83■□□□□ 0.44
SMPD1-209ENST00000533196 GNRHRP30968 328 aa17.83■□□□□ 0.44
SMPD1-209ENST00000533196 PRSS3P35030 304 aa17.83■□□□□ 0.44
SMPD1-209ENST00000533196 OR5H2Q8NGV7 314 aa17.83■□□□□ 0.44
SMPD1-209ENST00000533196 FANCD2OSQ96PS1 177 aa17.83■□□□□ 0.44
SMPD1-209ENST00000533196 C3orf84H3BNL1 204 aa17.82■□□□□ 0.44
SMPD1-209ENST00000533196 UPK2O00526 184 aa17.82■□□□□ 0.44
SMPD1-209ENST00000533196 APOA1P02647 267 aa17.82■□□□□ 0.44
SMPD1-209ENST00000533196 AREGP15514 252 aa17.82■□□□□ 0.44
SMPD1-209ENST00000533196 THOC7Q6I9Y2 204 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms