RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 CACNA1EQ15878 2313 aa12.55□□□□□ -0.4
PCDHA9-202ENST00000532602 IGHV3-48P01763 117 aa12.55□□□□□ -0.4
PCDHA9-202ENST00000532602 CD200R1LQ6Q8B3 271 aa12.55□□□□□ -0.4
PCDHA9-202ENST00000532602 RSG1Q9BU20 258 aa12.55□□□□□ -0.4
PCDHA9-202ENST00000532602 ZFP30Q9Y2G7 519 aa12.55□□□□□ -0.4
PCDHA9-202ENST00000532602 ZNF324O75467 553 aaPredicted RBP12.55□□□□□ -0.4
PCDHA9-202ENST00000532602 WDR25Q64LD2 544 aaPredicted RBP12.55□□□□□ -0.4
PCDHA9-202ENST00000532602 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.55□□□□□ -0.4
PCDHA9-202ENST00000532602 TUBA4BQ9H853 241 aa12.55□□□□□ -0.4
PCDHA9-202ENST00000532602 EFEMP2O95967 443 aa12.55□□□□□ -0.4
PCDHA9-202ENST00000532602 TGFAP01135 160 aa12.55□□□□□ -0.4
PCDHA9-202ENST00000532602 IGHV3-23P01764 117 aa12.55□□□□□ -0.4
PCDHA9-202ENST00000532602 MRPL32Q9BYC8 188 aaKnown RBP12.55□□□□□ -0.4
PCDHA9-202ENST00000532602 A0A0B4J293 547 aa12.54□□□□□ -0.4
PCDHA9-202ENST00000532602 CKS2P33552 79 aa12.54□□□□□ -0.4
PCDHA9-202ENST00000532602 FAM3BP58499 235 aaPredicted RBP12.54□□□□□ -0.4
PCDHA9-202ENST00000532602 ZFP36L1Q07352 338 aaKnown RBP12.54□□□□□ -0.4
PCDHA9-202ENST00000532602 ACP7Q6ZNF0 438 aa12.54□□□□□ -0.4
PCDHA9-202ENST00000532602 FAM90A1Q86YD7 464 aa12.54□□□□□ -0.4
PCDHA9-202ENST00000532602 OR5AC2Q9NZP5 309 aa12.54□□□□□ -0.4
PCDHA9-202ENST00000532602 SPRR3Q9UBC9 169 aa12.54□□□□□ -0.4
PCDHA9-202ENST00000532602 RTN4RQ9BZR6 473 aa12.54□□□□□ -0.4
PCDHA9-202ENST00000532602 C7orf69Q9H7B7 122 aa12.54□□□□□ -0.4
PCDHA9-202ENST00000532602 IGHV2OR16-5A0A0B4J2B6 119 aa12.54□□□□□ -0.4
PCDHA9-202ENST00000532602 PTBP3O95758 552 aaKnown RBP12.54□□□□□ -0.4
PCDHA9-202ENST00000532602 TRGC1P0CF51 173 aa12.54□□□□□ -0.4
PCDHA9-202ENST00000532602 ANOS1P23352 680 aa12.54□□□□□ -0.4
PCDHA9-202ENST00000532602 ISOC2Q96AB3 205 aa12.54□□□□□ -0.4
PCDHA9-202ENST00000532602 OR51M1Q9H341 326 aa12.54□□□□□ -0.4
PCDHA9-202ENST00000532602 FNDC1Q4ZHG4 1894 aaPredicted RBP12.54□□□□□ -0.4
PCDHA9-202ENST00000532602 IGLV3-12A0A075B6K2 115 aa12.54□□□□□ -0.4
PCDHA9-202ENST00000532602 IGKV3D-15A0A087WSY6 115 aa12.54□□□□□ -0.4
PCDHA9-202ENST00000532602 A6NDN8 102 aa12.54□□□□□ -0.4
PCDHA9-202ENST00000532602 TMEM14DPA8MWL7 114 aa12.54□□□□□ -0.4
PCDHA9-202ENST00000532602 NDUFB4O95168 129 aa12.54□□□□□ -0.4
PCDHA9-202ENST00000532602 IGKV3-15P01624 115 aa12.54□□□□□ -0.4
PCDHA9-202ENST00000532602 CD99P14209 185 aa12.54□□□□□ -0.4
PCDHA9-202ENST00000532602 EIF3GO75821 320 aaKnown RBP eCLIP12.54□□□□□ -0.4
PCDHA9-202ENST00000532602 GATAD1Q8WUU5 269 aa12.54□□□□□ -0.4
PCDHA9-202ENST00000532602 YAE1D1Q9NRH1 226 aa12.53□□□□□ -0.4
PCDHA9-202ENST00000532602 LHX2P50458 406 aa12.53□□□□□ -0.4
PCDHA9-202ENST00000532602 DRAM1Q8N682 238 aa12.53□□□□□ -0.4
PCDHA9-202ENST00000532602 SLC25A38Q96DW6 304 aa12.53□□□□□ -0.4
PCDHA9-202ENST00000532602 RTTNQ86VV8 2226 aa12.53□□□□□ -0.4
PCDHA9-202ENST00000532602 INTS1Q8N201 2190 aaKnown RBP12.53□□□□□ -0.4
PCDHA9-202ENST00000532602 TFF1P04155 84 aa12.53□□□□□ -0.4
PCDHA9-202ENST00000532602 C1QL2Q7Z5L3 287 aa12.53□□□□□ -0.4
PCDHA9-202ENST00000532602 ZNF502Q8TBZ5 544 aa12.53□□□□□ -0.4
PCDHA9-202ENST00000532602 ZG16O60844 167 aa12.53□□□□□ -0.4
PCDHA9-202ENST00000532602 GCGP01275 180 aa12.53□□□□□ -0.4
PCDHA9-202ENST00000532602 SMIM8Q96KF7 97 aa12.53□□□□□ -0.4
PCDHA9-202ENST00000532602 HKR1P10072 659 aa12.52□□□□□ -0.4
PCDHA9-202ENST00000532602 HERPUD1Q15011 391 aa12.52□□□□□ -0.4
PCDHA9-202ENST00000532602 POC1AQ8NBT0 407 aa12.52□□□□□ -0.4
PCDHA9-202ENST00000532602 VWA8A3KMH1 1905 aa12.52□□□□□ -0.4
PCDHA9-202ENST00000532602 RLFQ13129 1914 aa12.52□□□□□ -0.4
PCDHA9-202ENST00000532602 LOC102723996A0A087X1L8 192 aa12.52□□□□□ -0.4
PCDHA9-202ENST00000532602 C17orf100A8MU93 164 aa12.52□□□□□ -0.4
PCDHA9-202ENST00000532602 RPL39P5Q59GN2 51 aa12.52□□□□□ -0.4
PCDHA9-202ENST00000532602 PAPPA-AS1Q5QFB9 102 aa12.52□□□□□ -0.41
PCDHA9-202ENST00000532602 ZCCHC24Q8N2G6 241 aaKnown RBP12.52□□□□□ -0.41
PCDHA9-202ENST00000532602 DOCK4Q8N1I0 1966 aa12.52□□□□□ -0.41
PCDHA9-202ENST00000532602 HSPB1P04792 205 aaKnown RBP12.52□□□□□ -0.41
PCDHA9-202ENST00000532602 IL4P05112 153 aa12.52□□□□□ -0.41
PCDHA9-202ENST00000532602 RPS11P62280 158 aaKnown RBP eCLIP12.52□□□□□ -0.41
PCDHA9-202ENST00000532602 PEAR1Q5VY43 1037 aaPredicted RBP12.52□□□□□ -0.41
PCDHA9-202ENST00000532602 NPIPB3Q92617 1050 aa12.52□□□□□ -0.41
PCDHA9-202ENST00000532602 SPTBN2O15020 2390 aa12.52□□□□□ -0.41
PCDHA9-202ENST00000532602 IGHV3-35A0A0C4DH35 117 aa12.52□□□□□ -0.41
PCDHA9-202ENST00000532602 HLA-DQA1P01909 254 aa12.52□□□□□ -0.41
PCDHA9-202ENST00000532602 FAM159AQ6UWV7 190 aa12.52□□□□□ -0.41
PCDHA9-202ENST00000532602 S4R3C0 116 aa12.52□□□□□ -0.41
PCDHA9-202ENST00000532602 IFITM10A6NMD0 228 aa12.51□□□□□ -0.41
PCDHA9-202ENST00000532602 BTF3P20290 206 aaKnown RBP12.51□□□□□ -0.41
PCDHA9-202ENST00000532602 SAPCD1Q5SSQ6 148 aa12.51□□□□□ -0.41
PCDHA9-202ENST00000532602 ZNF818PQ6ZRF7 136 aa12.51□□□□□ -0.41
PCDHA9-202ENST00000532602 NPIPB9F8W1W9 429 aa12.51□□□□□ -0.41
PCDHA9-202ENST00000532602 C2orf83Q53S99 150 aa12.51□□□□□ -0.41
PCDHA9-202ENST00000532602 TBX15Q96SF7 602 aa12.51□□□□□ -0.41
PCDHA9-202ENST00000532602 NPFFR1Q9GZQ6 430 aa12.51□□□□□ -0.41
PCDHA9-202ENST00000532602 NPDC1Q9NQX5 325 aaPredicted RBP12.51□□□□□ -0.41
PCDHA9-202ENST00000532602 E9PLN8 166 aa12.51□□□□□ -0.41
PCDHA9-202ENST00000532602 NTN3O00634 580 aaPredicted RBP12.51□□□□□ -0.41
PCDHA9-202ENST00000532602 ZNF207O43670 478 aaKnown RBP12.51□□□□□ -0.41
PCDHA9-202ENST00000532602 DLX6P56179 175 aa12.51□□□□□ -0.41
PCDHA9-202ENST00000532602 CYB561D1Q8N8Q1 229 aa12.51□□□□□ -0.41
PCDHA9-202ENST00000532602 VKORC1Q9BQB6 163 aa12.51□□□□□ -0.41
PCDHA9-202ENST00000532602 TBR1Q16650 682 aa12.51□□□□□ -0.41
PCDHA9-202ENST00000532602 ASPHD2Q6ICH7 369 aa12.51□□□□□ -0.41
PCDHA9-202ENST00000532602 LOC389332A0A1B0GUA5 103 aa12.5□□□□□ -0.41
PCDHA9-202ENST00000532602 ZIC4Q8N9L1 334 aa12.5□□□□□ -0.41
PCDHA9-202ENST00000532602 COPS9Q8WXC6 57 aa12.5□□□□□ -0.41
PCDHA9-202ENST00000532602 ATG101Q9BSB4 218 aa12.5□□□□□ -0.41
PCDHA9-202ENST00000532602 SIP14410 1827 aa12.5□□□□□ -0.41
PCDHA9-202ENST00000532602 CA7P43166 264 aa12.5□□□□□ -0.41
PCDHA9-202ENST00000532602 PLAURQ03405 335 aa12.5□□□□□ -0.41
PCDHA9-202ENST00000532602 TMEM177Q53S58 311 aa12.5□□□□□ -0.41
PCDHA9-202ENST00000532602 FAM216BQ8N7L0 139 aa12.5□□□□□ -0.41
PCDHA9-202ENST00000532602 SPSB4Q96A44 273 aa12.5□□□□□ -0.41
PCDHA9-202ENST00000532602 DPH3Q96FX2 82 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms