RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 ZNF580Q9UK33 172 aa17.56■□□□□ 0.4
LRRK1-208ENST00000532029 KCNIP3Q9Y2W7 256 aa17.56■□□□□ 0.4
LRRK1-208ENST00000532029 CRYM-AS1A6NIL9 109 aa17.55■□□□□ 0.4
LRRK1-208ENST00000532029 MARCH11A6NNE9 402 aa17.55■□□□□ 0.4
LRRK1-208ENST00000532029 KRASP01116 189 aa17.55■□□□□ 0.4
LRRK1-208ENST00000532029 KRTAP10-3P60369 221 aa17.55■□□□□ 0.4
LRRK1-208ENST00000532029 TRIM16LQ309B1 348 aa17.55■□□□□ 0.4
LRRK1-208ENST00000532029 SP6Q3SY56 376 aa17.55■□□□□ 0.4
LRRK1-208ENST00000532029 OR5AU1Q8NGC0 362 aa17.55■□□□□ 0.4
LRRK1-208ENST00000532029 GRPEL2Q8TAA5 225 aa17.55■□□□□ 0.4
LRRK1-208ENST00000532029 TMEM230Q96A57 120 aa17.55■□□□□ 0.4
LRRK1-208ENST00000532029 ZNF430Q9H8G1 570 aaPredicted RBP17.55■□□□□ 0.4
LRRK1-208ENST00000532029 TMEM140Q9NV12 185 aa17.55■□□□□ 0.4
LRRK1-208ENST00000532029 FBXO24O75426 580 aa17.54■□□□□ 0.4
LRRK1-208ENST00000532029 ATG12O94817 140 aa17.54■□□□□ 0.4
LRRK1-208ENST00000532029 NDUFB6O95139 128 aa17.54■□□□□ 0.4
LRRK1-208ENST00000532029 OR5AC1P0C628 307 aa17.54■□□□□ 0.4
LRRK1-208ENST00000532029 G6PCP35575 357 aa17.54■□□□□ 0.4
LRRK1-208ENST00000532029 DHODHQ02127 395 aa17.54■□□□□ 0.4
LRRK1-208ENST00000532029 TMEM267Q0VDI3 215 aaPredicted RBP17.54■□□□□ 0.4
LRRK1-208ENST00000532029 MRGPRG-AS1Q2M3A8 158 aa17.54■□□□□ 0.4
LRRK1-208ENST00000532029 WSB1Q9Y6I7 421 aa17.54■□□□□ 0.4
LRRK1-208ENST00000532029 TRAV41A0A0B4J266 112 aa17.53■□□□□ 0.4
LRRK1-208ENST00000532029 ARPC1BO15143 372 aaKnown RBP17.53■□□□□ 0.4
LRRK1-208ENST00000532029 UCP1P25874 307 aa17.53■□□□□ 0.4
LRRK1-208ENST00000532029 BTCP35070 178 aa17.53■□□□□ 0.4
LRRK1-208ENST00000532029 RPL8P62917 257 aaKnown RBP17.53■□□□□ 0.4
LRRK1-208ENST00000532029 SRSF4Q08170 494 aaKnown RBP17.53■□□□□ 0.4
LRRK1-208ENST00000532029 ECSCRQ19T08 205 aa17.53■□□□□ 0.4
LRRK1-208ENST00000532029 MZT2BQ6NZ67 158 aa17.53■□□□□ 0.4
LRRK1-208ENST00000532029 ZNF329Q86UD4 541 aa17.53■□□□□ 0.4
LRRK1-208ENST00000532029 CENPSQ8N2Z9 138 aa17.53■□□□□ 0.4
LRRK1-208ENST00000532029 C11orf44Q8N8P7 122 aa17.53■□□□□ 0.4
LRRK1-208ENST00000532029 OR4X2Q8NGF9 303 aa17.53■□□□□ 0.4
LRRK1-208ENST00000532029 CITED1Q99966 193 aa17.53■□□□□ 0.4
LRRK1-208ENST00000532029 FAM103A1Q9BTL3 118 aaKnown RBP17.53■□□□□ 0.4
LRRK1-208ENST00000532029 FBXO7Q9Y3I1 522 aa17.53■□□□□ 0.4
LRRK1-208ENST00000532029 UPK2O00526 184 aa17.52■□□□□ 0.4
LRRK1-208ENST00000532029 ANXA3P12429 323 aa17.52■□□□□ 0.4
LRRK1-208ENST00000532029 MAS1LP35410 378 aa17.52■□□□□ 0.4
LRRK1-208ENST00000532029 SGMS2Q8NHU3 365 aa17.52■□□□□ 0.4
LRRK1-208ENST00000532029 WIPF2Q8TF74 440 aaPredicted RBP17.52■□□□□ 0.4
LRRK1-208ENST00000532029 PHB2Q99623 299 aa17.52■□□□□ 0.4
LRRK1-208ENST00000532029 TMEM222Q9H0R3 208 aa17.52■□□□□ 0.4
LRRK1-208ENST00000532029 G3V318 75 aa17.51■□□□□ 0.39
LRRK1-208ENST00000532029 SNAPC5O75971 98 aa17.51■□□□□ 0.39
LRRK1-208ENST00000532029 IGKV1-39P01597 117 aa17.51■□□□□ 0.39
LRRK1-208ENST00000532029 IGKV1D-39P04432 117 aa17.51■□□□□ 0.39
LRRK1-208ENST00000532029 EGR2P11161 476 aaPredicted RBP17.51■□□□□ 0.39
LRRK1-208ENST00000532029 HLA-GP17693 338 aa17.51■□□□□ 0.39
LRRK1-208ENST00000532029 CRIP2P52943 208 aaPredicted RBP17.51■□□□□ 0.39
LRRK1-208ENST00000532029 SSBP2P81877 361 aaPredicted RBP17.51■□□□□ 0.39
LRRK1-208ENST00000532029 ASAH1Q13510 395 aa17.51■□□□□ 0.39
LRRK1-208ENST00000532029 TMEM128Q5BJH2 165 aa17.51■□□□□ 0.39
LRRK1-208ENST00000532029 UNQ5815/PRO19632Q6UWF5 114 aa17.51■□□□□ 0.39
LRRK1-208ENST00000532029 C10orf99Q6UWK7 81 aa17.51■□□□□ 0.39
LRRK1-208ENST00000532029 H2BFWTQ7Z2G1 175 aa17.51■□□□□ 0.39
LRRK1-208ENST00000532029 CADM3Q8N126 398 aa17.51■□□□□ 0.39
LRRK1-208ENST00000532029 COMMD1Q8N668 190 aa17.51■□□□□ 0.39
LRRK1-208ENST00000532029 SRSF12Q8WXF0 261 aaKnown RBP17.51■□□□□ 0.39
LRRK1-208ENST00000532029 GALNT14Q96FL9 552 aa17.51■□□□□ 0.39
LRRK1-208ENST00000532029 SEC22AQ96IW7 307 aa17.51■□□□□ 0.39
LRRK1-208ENST00000532029 TSC22D3Q99576 134 aa17.51■□□□□ 0.39
LRRK1-208ENST00000532029 TBC1D24Q9ULP9 559 aa17.51■□□□□ 0.39
LRRK1-208ENST00000532029 IL6RP08887 468 aaPredicted RBP17.5■□□□□ 0.39
LRRK1-208ENST00000532029 CD28P10747 220 aa17.5■□□□□ 0.39
LRRK1-208ENST00000532029 AKR1C2P52895 323 aa17.5■□□□□ 0.39
LRRK1-208ENST00000532029 TEX38Q6PEX7 206 aa17.5■□□□□ 0.39
LRRK1-208ENST00000532029 ZNF695Q8IW36 515 aa17.5■□□□□ 0.39
LRRK1-208ENST00000532029 LFNGQ8NES3 379 aa17.5■□□□□ 0.39
LRRK1-208ENST00000532029 RNASE11Q8TAA1 199 aaKnown RBP17.5■□□□□ 0.39
LRRK1-208ENST00000532029 GLYATL2Q8WU03 294 aa17.5■□□□□ 0.39
LRRK1-208ENST00000532029 NUBP2Q9Y5Y2 271 aa17.5■□□□□ 0.39
LRRK1-208ENST00000532029 TRAV3A0A0B4J244 114 aa17.49■□□□□ 0.39
LRRK1-208ENST00000532029 FAM240BA0A1B0GVZ2 78 aa17.49■□□□□ 0.39
LRRK1-208ENST00000532029 VAMP1P23763 118 aa17.49■□□□□ 0.39
LRRK1-208ENST00000532029 RPL27AP46776 148 aaKnown RBP17.49■□□□□ 0.39
LRRK1-208ENST00000532029 AKIRIN2Q53H80 203 aa17.49■□□□□ 0.39
LRRK1-208ENST00000532029 C10orf55Q5SWW7 151 aa17.49■□□□□ 0.39
LRRK1-208ENST00000532029 SLC25A42Q86VD7 318 aa17.49■□□□□ 0.39
LRRK1-208ENST00000532029 TMEM68Q96MH6 324 aa17.49■□□□□ 0.39
LRRK1-208ENST00000532029 COMMD5Q9GZQ3 224 aa17.49■□□□□ 0.39
LRRK1-208ENST00000532029 FLVCR2Q9UPI3 526 aa17.49■□□□□ 0.39
LRRK1-208ENST00000532029 A0A1W2PN81 502 aa17.48■□□□□ 0.39
LRRK1-208ENST00000532029 MSGN1A6NI15 193 aa17.48■□□□□ 0.39
LRRK1-208ENST00000532029 CDS2O95674 445 aa17.48■□□□□ 0.39
LRRK1-208ENST00000532029 SLC6A1P30531 599 aa17.48■□□□□ 0.39
LRRK1-208ENST00000532029 CHRNA7P36544 502 aa17.48■□□□□ 0.39
LRRK1-208ENST00000532029 UBE2MP61081 183 aaKnown RBP17.48■□□□□ 0.39
LRRK1-208ENST00000532029 SUPT4H1P63272 117 aaKnown RBP17.48■□□□□ 0.39
LRRK1-208ENST00000532029 SRPXP78539 464 aa17.48■□□□□ 0.39
LRRK1-208ENST00000532029 IFITM3Q01628 133 aa17.48■□□□□ 0.39
LRRK1-208ENST00000532029 CFHR3Q02985 330 aa17.48■□□□□ 0.39
LRRK1-208ENST00000532029 TMEM187Q14656 261 aa17.48■□□□□ 0.39
LRRK1-208ENST00000532029 RBPMSQ93062 196 aaKnown RBP17.48■□□□□ 0.39
LRRK1-208ENST00000532029 RRNAD1Q96FB5 475 aaKnown RBP17.48■□□□□ 0.39
LRRK1-208ENST00000532029 SPIN2AQ99865 258 aa17.48■□□□□ 0.39
LRRK1-208ENST00000532029 SPIN2BQ9BPZ2 258 aa17.48■□□□□ 0.39
LRRK1-208ENST00000532029 FOXA2Q9Y261 457 aaPredicted RBP17.48■□□□□ 0.39
LRRK1-208ENST00000532029 STAB1Q9NY15 2570 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms