RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 B4DXG7 233 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 PDCD5O14737 125 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 DUSP14O95147 198 aaKnown RBP2.41□□□□□ -2.02
PTPRK-220ENST00000531466 APOC3P02656 99 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 REG1AP05451 166 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 CPMP14384 443 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 SPNP16150 400 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 CXCL2P19875 107 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 CXCL3P19876 107 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 NTF3P20783 257 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 PFN2P35080 140 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 CXCL12P48061 93 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 DAD1P61803 113 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 HOXC5Q00444 222 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 MMDQ15546 238 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 TTC32Q5I0X7 151 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 FAM74A1Q5RGS3 127 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 LYRM7Q5U5X0 104 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 ALKAL1Q6UXT8 129 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 TCF23Q7RTU1 214 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 ZNF720Q7Z2F6 126 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 GKN2Q86XP6 184 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 CBLN2Q8IUK8 224 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 PIANPQ8IYJ0 282 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 MMGT1Q8N4V1 131 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 ZNF433Q8N7K0 673 aaPredicted RBP2.41□□□□□ -2.02
PTPRK-220ENST00000531466 FER1L6-AS1Q8NA97 138 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 OR10G6Q8NH81 332 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 RXFP4Q8TDU9 374 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 TMEM54Q969K7 222 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 IP6K3Q96PC2 410 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 HSD17B10Q99714 261 aaKnown RBP2.41□□□□□ -2.02
PTPRK-220ENST00000531466 MIEN1Q9BRT3 115 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 DERL1Q9BUN8 251 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 COMMD5Q9GZQ3 224 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 TMEM191AQ9H0A3 160 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 TMEM222Q9H0R3 208 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 OR51E2Q9H255 320 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 PRO1933Q9H354 126 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 BANF2Q9H503 90 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 KCNIP2Q9NS61 270 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 OR5AC2Q9NZP5 309 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 CCDC167Q9P0B6 97 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 SLC2A6Q9UGQ3 507 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 PCYOX1Q9UHG3 505 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 VAX2Q9UIW0 290 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 WASHC3Q9Y3C0 194 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 YTHDF2Q9Y5A9 579 aaKnown RBP2.41□□□□□ -2.02
PTPRK-220ENST00000531466 BCORL1Q5H9F3 1711 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 MAGI3Q5TCQ9 1506 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 KDM6AO15550 1401 aaPredicted RBP2.41□□□□□ -2.02
PTPRK-220ENST00000531466 RIC1Q4ADV7 1423 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 CTTNBP2Q8WZ74 1663 aa2.41□□□□□ -2.02
PTPRK-220ENST00000531466 MYO5BQ9ULV0 1848 aa2.4□□□□□ -2.02
PTPRK-220ENST00000531466 NEO1Q92859 1461 aa2.4□□□□□ -2.02
PTPRK-220ENST00000531466 MLH3Q9UHC1 1453 aa2.4□□□□□ -2.02
PTPRK-220ENST00000531466 NRXN1Q9ULB1 1477 aa2.4□□□□□ -2.02
PTPRK-220ENST00000531466 SHANK2Q9UPX8 1470 aa2.4□□□□□ -2.02
PTPRK-220ENST00000531466 A0A0B4J2A0 478 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 GGT3PA6NGU5 568 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 FAM183AA6NL82 134 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 TMEM212A6NML5 194 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 GGTLC3B5MD39 225 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 LINC01619G3V211 115 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 K7ENP7 123 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 UPK2O00526 184 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 PIRO00625 290 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 ANGPTL7O43827 346 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 OR2T1O43869 369 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 EDF1O60869 148 aaKnown RBP2.4□□□□□ -2.03
PTPRK-220ENST00000531466 MPC2O95563 127 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 IGHMP01871 453 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 PGA4P0DJD7 388 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 PGA3P0DJD8 388 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 PGA5P0DJD9 388 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 BCL2P10415 239 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 ERGP11308 486 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 CSRP1P21291 193 aaKnown RBP2.4□□□□□ -2.03
PTPRK-220ENST00000531466 PRTN3P24158 256 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 PPICP45877 212 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 INPP1P49441 399 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 NUDT2P50583 147 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 TIMM10P62072 90 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 RPS24P62847 133 aaKnown RBP2.4□□□□□ -2.03
PTPRK-220ENST00000531466 UBA52P62987 128 aaKnown RBP2.4□□□□□ -2.03
PTPRK-220ENST00000531466 DEFA5Q01523 94 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 LAMTOR4Q0VGL1 99 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 ZNF726P1Q15940 193 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 C12orf74Q32Q52 190 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 TMEM52BQ4KMG9 183 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 PAGE3Q5JUK9 113 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 PVRIGQ6DKI7 326 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 FOXI2Q6ZQN5 318 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 ZNF664Q8N3J9 261 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 ANKRD29Q8N6D5 301 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 C5orf17Q8NAS9 161 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 PLPP5Q8NEB5 264 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 OR2T33Q8NG76 320 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 OR10D4PQ8NGN7 298 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 RFESDQ8TAC1 157 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms