RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 NR2C2APQ86WQ0 139 aa13.82□□□□□ -0.2
SSSCA1-206ENST00000531405 TMEM61Q8N0U2 210 aa13.82□□□□□ -0.2
SSSCA1-206ENST00000531405 MLXQ9UH92 298 aa13.82□□□□□ -0.2
SSSCA1-206ENST00000531405 MRPS7Q9Y2R9 242 aaKnown RBP13.82□□□□□ -0.2
SSSCA1-206ENST00000531405 OR2W1Q9Y3N9 320 aa13.82□□□□□ -0.2
SSSCA1-206ENST00000531405 TMEM213A2RRL7 107 aa13.81□□□□□ -0.2
SSSCA1-206ENST00000531405 DPPA5A6NC42 116 aa13.81□□□□□ -0.2
SSSCA1-206ENST00000531405 NPIPB5A8MRT5 1133 aa13.81□□□□□ -0.2
SSSCA1-206ENST00000531405 HLA-DQB1P01920 261 aa13.81□□□□□ -0.2
SSSCA1-206ENST00000531405 MYOD1P15172 320 aa13.81□□□□□ -0.2
SSSCA1-206ENST00000531405 AREGP15514 252 aa13.81□□□□□ -0.2
SSSCA1-206ENST00000531405 CD36P16671 472 aa13.81□□□□□ -0.2
SSSCA1-206ENST00000531405 RAB3BP20337 219 aa13.81□□□□□ -0.2
SSSCA1-206ENST00000531405 DTYMKP23919 212 aa13.81□□□□□ -0.2
SSSCA1-206ENST00000531405 MYL9P24844 172 aa13.81□□□□□ -0.2
SSSCA1-206ENST00000531405 RPL27AP46776 148 aaKnown RBP13.81□□□□□ -0.2
SSSCA1-206ENST00000531405 CDNFQ49AH0 187 aa13.81□□□□□ -0.2
SSSCA1-206ENST00000531405 SLC16A13Q7RTY0 426 aa13.81□□□□□ -0.2
SSSCA1-206ENST00000531405 TCTEX1D2Q8WW35 142 aa13.81□□□□□ -0.2
SSSCA1-206ENST00000531405 FANCD2OSQ96PS1 177 aa13.81□□□□□ -0.2
SSSCA1-206ENST00000531405 OR2A7Q96R45 310 aa13.81□□□□□ -0.2
SSSCA1-206ENST00000531405 GPHA2Q96T91 129 aa13.81□□□□□ -0.2
SSSCA1-206ENST00000531405 CENPOQ9BU64 300 aa13.81□□□□□ -0.2
SSSCA1-206ENST00000531405 SPATA2Q9UM82 520 aa13.81□□□□□ -0.2
SSSCA1-206ENST00000531405 ZNF320A2RRD8 509 aa13.8□□□□□ -0.2
SSSCA1-206ENST00000531405 SCAF4O95104 1147 aaKnown RBP13.8□□□□□ -0.2
SSSCA1-206ENST00000531405 REG1AP05451 166 aa13.8□□□□□ -0.2
SSSCA1-206ENST00000531405 BRWD1-AS2P59051 145 aa13.8□□□□□ -0.2
SSSCA1-206ENST00000531405 FAM209BQ5JX69 171 aa13.8□□□□□ -0.2
SSSCA1-206ENST00000531405 ZNF57Q68EA5 555 aaPredicted RBP13.8□□□□□ -0.2
SSSCA1-206ENST00000531405 GPHB5Q86YW7 130 aa13.8□□□□□ -0.2
SSSCA1-206ENST00000531405 PUSL1Q8N0Z8 303 aaKnown RBP13.8□□□□□ -0.2
SSSCA1-206ENST00000531405 OR4S2Q8NH73 311 aa13.8□□□□□ -0.2
SSSCA1-206ENST00000531405 TMEM167AQ8TBQ9 72 aa13.8□□□□□ -0.2
SSSCA1-206ENST00000531405 NUDCD2Q8WVJ2 157 aa13.8□□□□□ -0.2
SSSCA1-206ENST00000531405 SLC2A9Q9NRM0 540 aa13.8□□□□□ -0.2
SSSCA1-206ENST00000531405 ZNF735P0CB33 412 aa13.79□□□□□ -0.2
SSSCA1-206ENST00000531405 EIF4EBP1Q13541 118 aaPredicted RBP13.79□□□□□ -0.2
SSSCA1-206ENST00000531405 TBCEQ15813 527 aaPredicted RBP13.79□□□□□ -0.2
SSSCA1-206ENST00000531405 HACD4Q5VWC8 232 aa13.79□□□□□ -0.2
SSSCA1-206ENST00000531405 SSX9Q7RTT3 188 aa13.79□□□□□ -0.2
SSSCA1-206ENST00000531405 ZNF367Q7RTV3 350 aa13.79□□□□□ -0.2
SSSCA1-206ENST00000531405 UXS1Q8NBZ7 420 aa13.79□□□□□ -0.2
SSSCA1-206ENST00000531405 OR52B4Q8NGK2 314 aa13.79□□□□□ -0.2
SSSCA1-206ENST00000531405 OVOL2Q9BRP0 275 aa13.79□□□□□ -0.2
SSSCA1-206ENST00000531405 NDUFB11Q9NX14 153 aa13.79□□□□□ -0.2
SSSCA1-206ENST00000531405 TAS2R8Q9NYW2 309 aa13.79□□□□□ -0.2
SSSCA1-206ENST00000531405 TMEM235A6NFC5 223 aa13.78□□□□□ -0.2
SSSCA1-206ENST00000531405 CTXN2P0C2S0 81 aa13.78□□□□□ -0.2
SSSCA1-206ENST00000531405 PSMB6P28072 239 aa13.78□□□□□ -0.2
SSSCA1-206ENST00000531405 C22orf42Q6IC83 251 aa13.78□□□□□ -0.2
SSSCA1-206ENST00000531405 BTNL8Q6UX41 500 aa13.78□□□□□ -0.2
SSSCA1-206ENST00000531405 VSTM2AQ8TAG5 236 aa13.78□□□□□ -0.2
SSSCA1-206ENST00000531405 EEF1AKMT3Q96AZ1 226 aa13.78□□□□□ -0.2
SSSCA1-206ENST00000531405 HSD17B10Q99714 261 aaKnown RBP13.78□□□□□ -0.2
SSSCA1-206ENST00000531405 GGTLC1Q9BX51 225 aa13.78□□□□□ -0.2
SSSCA1-206ENST00000531405 KMT2AQ03164 3969 aa13.78□□□□□ -0.2
SSSCA1-206ENST00000531405 TRDV1A0A1B0GX56 115 aa13.77□□□□□ -0.21
SSSCA1-206ENST00000531405 MFSD2BA6NFX1 497 aa13.77□□□□□ -0.21
SSSCA1-206ENST00000531405 ERICH4A6NGS2 130 aa13.77□□□□□ -0.21
SSSCA1-206ENST00000531405 A8MWP6 167 aa13.77□□□□□ -0.21
SSSCA1-206ENST00000531405 SLC22A5O76082 557 aa13.77□□□□□ -0.21
SSSCA1-206ENST00000531405 CRYGCP07315 174 aa13.77□□□□□ -0.21
SSSCA1-206ENST00000531405 CTRB1P17538 263 aa13.77□□□□□ -0.21
SSSCA1-206ENST00000531405 MAS1LP35410 378 aa13.77□□□□□ -0.21
SSSCA1-206ENST00000531405 ARL6IP1Q15041 203 aa13.77□□□□□ -0.21
SSSCA1-206ENST00000531405 FAM106AQ4KMX7 169 aa13.77□□□□□ -0.21
SSSCA1-206ENST00000531405 TM4SF20Q53R12 229 aa13.77□□□□□ -0.21
SSSCA1-206ENST00000531405 CTRB2Q6GPI1 263 aa13.77□□□□□ -0.21
SSSCA1-206ENST00000531405 CNIH2Q6PI25 160 aa13.77□□□□□ -0.21
SSSCA1-206ENST00000531405 UNQ9165/PRO28630Q6UXU0 137 aa13.77□□□□□ -0.21
SSSCA1-206ENST00000531405 MFSD4AQ8N468 514 aa13.77□□□□□ -0.21
SSSCA1-206ENST00000531405 LINC00476Q8WZB0 136 aa13.77□□□□□ -0.21
SSSCA1-206ENST00000531405 LOC102724200A0A096LPH7 203 aaPredicted RBP13.76□□□□□ -0.21
SSSCA1-206ENST00000531405 CGB1A6NKQ9 187 aa13.76□□□□□ -0.21
SSSCA1-206ENST00000531405 TNFSF12O43508 249 aa13.76□□□□□ -0.21
SSSCA1-206ENST00000531405 SSX5O60225 188 aa13.76□□□□□ -0.21
SSSCA1-206ENST00000531405 PMS2P11Q13670 270 aa13.76□□□□□ -0.21
SSSCA1-206ENST00000531405 DCSTAMPQ9H295 470 aa13.76□□□□□ -0.21
SSSCA1-206ENST00000531405 IGLV11-55A0A075B6I3 123 aa13.75□□□□□ -0.21
SSSCA1-206ENST00000531405 IGHV3-35A0A0C4DH35 117 aa13.75□□□□□ -0.21
SSSCA1-206ENST00000531405 DHFRP00374 187 aa13.75□□□□□ -0.21
SSSCA1-206ENST00000531405 CLEC3BP05452 202 aa13.75□□□□□ -0.21
SSSCA1-206ENST00000531405 PTHLHP12272 177 aa13.75□□□□□ -0.21
SSSCA1-206ENST00000531405 DEFA4P12838 97 aa13.75□□□□□ -0.21
SSSCA1-206ENST00000531405 GNG2P59768 71 aa13.75□□□□□ -0.21
SSSCA1-206ENST00000531405 RPL8P62917 257 aaKnown RBP13.75□□□□□ -0.21
SSSCA1-206ENST00000531405 EWSR1Q01844 656 aaKnown RBP eCLIP13.75□□□□□ -0.21
SSSCA1-206ENST00000531405 ANXA10Q9UJ72 324 aa13.75□□□□□ -0.21
SSSCA1-206ENST00000531405 CXorf65A6NEN9 183 aa13.74□□□□□ -0.21
SSSCA1-206ENST00000531405 LY6G6CO95867 125 aa13.74□□□□□ -0.21
SSSCA1-206ENST00000531405 HRASP01112 189 aa13.74□□□□□ -0.21
SSSCA1-206ENST00000531405 HIST1H1BP16401 226 aaKnown RBP13.74□□□□□ -0.21
SSSCA1-206ENST00000531405 HLA-GP17693 338 aa13.74□□□□□ -0.21
SSSCA1-206ENST00000531405 KLK9Q2XQG4 91 aa13.74□□□□□ -0.21
SSSCA1-206ENST00000531405 OR4A47Q6IF82 309 aa13.74□□□□□ -0.21
SSSCA1-206ENST00000531405 CNBD2Q96M20 576 aa13.74□□□□□ -0.21
SSSCA1-206ENST00000531405 CCL28Q9NRJ3 127 aa13.74□□□□□ -0.21
SSSCA1-206ENST00000531405 KLK9Q9UKQ9 250 aa13.74□□□□□ -0.21
SSSCA1-206ENST00000531405 TRBV7-1A0A0A6YYK4 115 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 175.2 ms