RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 C15orf61A6NNL5 157 aa5.9□□□□□ -1.46
CD44-232ENST00000531118 NPIPB5A8MRT5 1133 aa5.9□□□□□ -1.46
CD44-232ENST00000531118 TEX22C9J3V5 150 aa5.9□□□□□ -1.46
CD44-232ENST00000531118 CRTAPO75718 401 aaPredicted RBP5.9□□□□□ -1.46
CD44-232ENST00000531118 IFNA21P01568 189 aa5.9□□□□□ -1.46
CD44-232ENST00000531118 IFNA17P01571 189 aa5.9□□□□□ -1.46
CD44-232ENST00000531118 CTSDP07339 412 aaPredicted RBP5.9□□□□□ -1.46
CD44-232ENST00000531118 GSTT2P0CG29 244 aa5.9□□□□□ -1.46
CD44-232ENST00000531118 GSTT2BP0CG30 244 aa5.9□□□□□ -1.46
CD44-232ENST00000531118 SAA1P0DJI8 122 aaPredicted RBP5.9□□□□□ -1.46
CD44-232ENST00000531118 PSMB6P28072 239 aa5.9□□□□□ -1.46
CD44-232ENST00000531118 GPR183P32249 361 aa5.9□□□□□ -1.46
CD44-232ENST00000531118 C12orf74Q32Q52 190 aa5.9□□□□□ -1.46
CD44-232ENST00000531118 Q5VSD8 79 aa5.9□□□□□ -1.46
CD44-232ENST00000531118 KDM4DQ6B0I6 523 aa5.9□□□□□ -1.46
CD44-232ENST00000531118 ZNF880Q6PDB4 577 aa5.9□□□□□ -1.46
CD44-232ENST00000531118 ZNF367Q7RTV3 350 aa5.9□□□□□ -1.46
CD44-232ENST00000531118 CEACAM19Q7Z692 300 aa5.9□□□□□ -1.46
CD44-232ENST00000531118 AMIGO2Q86SJ2 522 aa5.9□□□□□ -1.46
CD44-232ENST00000531118 ACBD7Q8N6N7 88 aa5.9□□□□□ -1.46
CD44-232ENST00000531118 TEX45Q8NA69 505 aa5.9□□□□□ -1.46
CD44-232ENST00000531118 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.9□□□□□ -1.46
CD44-232ENST00000531118 SETD6Q8TBK2 473 aa5.9□□□□□ -1.46
CD44-232ENST00000531118 GPR148Q8TDV2 347 aa5.9□□□□□ -1.46
CD44-232ENST00000531118 PTX4Q96A99 478 aa5.9□□□□□ -1.46
CD44-232ENST00000531118 MRPL48Q96GC5 212 aaKnown RBP5.9□□□□□ -1.46
CD44-232ENST00000531118 C5orf30Q96GV9 206 aa5.9□□□□□ -1.46
CD44-232ENST00000531118 ZNF436Q9C0F3 470 aaPredicted RBP5.9□□□□□ -1.46
CD44-232ENST00000531118 DAZ1Q9NQZ3 744 aaKnown RBP5.9□□□□□ -1.46
CD44-232ENST00000531118 RNF213Q63HN8 5207 aa5.89□□□□□ -1.47
CD44-232ENST00000531118 CREBL2O60519 120 aaPredicted RBP5.89□□□□□ -1.47
CD44-232ENST00000531118 ACTL6BO94805 426 aa5.89□□□□□ -1.47
CD44-232ENST00000531118 NAPSAO96009 420 aa5.89□□□□□ -1.47
CD44-232ENST00000531118 IGFBP3P17936 291 aaPredicted RBP5.89□□□□□ -1.47
CD44-232ENST00000531118 CEACAM6P40199 344 aa5.89□□□□□ -1.47
CD44-232ENST00000531118 MRPL28Q13084 256 aaKnown RBP5.89□□□□□ -1.47
CD44-232ENST00000531118 RTL8BQ17RB0 113 aa5.89□□□□□ -1.47
CD44-232ENST00000531118 JAGN1Q8N5M9 183 aa5.89□□□□□ -1.47
CD44-232ENST00000531118 C20orf173Q96LM9 149 aa5.89□□□□□ -1.47
CD44-232ENST00000531118 GABARAPL1Q9H0R8 117 aa5.89□□□□□ -1.47
CD44-232ENST00000531118 CHMP1AQ9HD42 196 aaPredicted RBP5.89□□□□□ -1.47
CD44-232ENST00000531118 DPPA5A6NC42 116 aa5.88□□□□□ -1.47
CD44-232ENST00000531118 SNTNA6NMZ2 147 aa5.88□□□□□ -1.47
CD44-232ENST00000531118 ZNF705EA8MWA4 302 aaPredicted RBP5.88□□□□□ -1.47
CD44-232ENST00000531118 CRYZL1O95825 349 aa5.88□□□□□ -1.47
CD44-232ENST00000531118 ZBTB25P24278 435 aa5.88□□□□□ -1.47
CD44-232ENST00000531118 RPS27AP62979 156 aaKnown RBP5.88□□□□□ -1.47
CD44-232ENST00000531118 CDK10Q15131 360 aa5.88□□□□□ -1.47
CD44-232ENST00000531118 RNF212Q495C1 297 aa5.88□□□□□ -1.47
CD44-232ENST00000531118 MMD2Q8IY49 270 aa5.88□□□□□ -1.47
CD44-232ENST00000531118 C6orf223Q8N319 242 aa5.88□□□□□ -1.47
CD44-232ENST00000531118 ZNF502Q8TBZ5 544 aa5.88□□□□□ -1.47
CD44-232ENST00000531118 PYDC1Q8WXC3 89 aa5.88□□□□□ -1.47
CD44-232ENST00000531118 NEDD4LQ96PU5 975 aa5.88□□□□□ -1.47
CD44-232ENST00000531118 FYTTD1Q96QD9 318 aaKnown RBP5.88□□□□□ -1.47
CD44-232ENST00000531118 MYCBPQ99417 103 aaPredicted RBP5.88□□□□□ -1.47
CD44-232ENST00000531118 CIB1Q99828 191 aa5.88□□□□□ -1.47
CD44-232ENST00000531118 GABARAPL3Q9BY60 117 aa5.88□□□□□ -1.47
CD44-232ENST00000531118 OR2D2Q9H210 308 aa5.88□□□□□ -1.47
CD44-232ENST00000531118 SDHAF2Q9NX18 166 aa5.88□□□□□ -1.47
CD44-232ENST00000531118 IMPAD1Q9NX62 359 aa5.88□□□□□ -1.47
CD44-232ENST00000531118 OAZ3Q9UMX2 235 aa5.88□□□□□ -1.47
CD44-232ENST00000531118 IGLV11-55A0A075B6I3 123 aa5.87□□□□□ -1.47
CD44-232ENST00000531118 TRAV8-7A0A075B6U6 113 aa5.87□□□□□ -1.47
CD44-232ENST00000531118 TRBV7-1A0A0A6YYK4 115 aa5.87□□□□□ -1.47
CD44-232ENST00000531118 A0A1B0GW64 132 aa5.87□□□□□ -1.47
CD44-232ENST00000531118 SAC3D1A6NKF1 404 aa5.87□□□□□ -1.47
CD44-232ENST00000531118 MRPS14O60783 128 aaKnown RBP5.87□□□□□ -1.47
CD44-232ENST00000531118 CLEC3BP05452 202 aa5.87□□□□□ -1.47
CD44-232ENST00000531118 GIG44P09565 113 aaPredicted RBP5.87□□□□□ -1.47
CD44-232ENST00000531118 RRASP10301 218 aa5.87□□□□□ -1.47
CD44-232ENST00000531118 AREGP15514 252 aa5.87□□□□□ -1.47
CD44-232ENST00000531118 RPA2P15927 270 aa5.87□□□□□ -1.47
CD44-232ENST00000531118 C4BPBP20851 252 aa5.87□□□□□ -1.47
CD44-232ENST00000531118 POLR2IP36954 125 aaKnown RBP5.87□□□□□ -1.47
CD44-232ENST00000531118 TFPI2P48307 235 aa5.87□□□□□ -1.47
CD44-232ENST00000531118 GTF2A1P52655 376 aaPredicted RBP5.87□□□□□ -1.47
CD44-232ENST00000531118 GBX2P52951 348 aaPredicted RBP5.87□□□□□ -1.47
CD44-232ENST00000531118 KLK9Q2XQG4 91 aa5.87□□□□□ -1.47
CD44-232ENST00000531118 XAF1Q6GPH4 301 aa5.87□□□□□ -1.47
CD44-232ENST00000531118 C6orf201Q7Z4U5 140 aa5.87□□□□□ -1.47
CD44-232ENST00000531118 LHFPL3Q86UP9 236 aa5.87□□□□□ -1.47
CD44-232ENST00000531118 TRUB1Q8WWH5 349 aaKnown RBP5.87□□□□□ -1.47
CD44-232ENST00000531118 LGALS12Q96DT0 336 aa5.87□□□□□ -1.47
CD44-232ENST00000531118 CXorf58Q96LI9 332 aa5.87□□□□□ -1.47
CD44-232ENST00000531118 HDHD3Q9BSH5 251 aaPredicted RBP5.87□□□□□ -1.47
CD44-232ENST00000531118 FAAP24Q9BTP7 215 aa5.87□□□□□ -1.47
CD44-232ENST00000531118 C9orf16Q9BUW7 83 aa5.87□□□□□ -1.47
CD44-232ENST00000531118 RDH8Q9NYR8 311 aa5.87□□□□□ -1.47
CD44-232ENST00000531118 KLK9Q9UKQ9 250 aa5.87□□□□□ -1.47
CD44-232ENST00000531118 EXOGQ9Y2C4 368 aaKnown RBP5.87□□□□□ -1.47
CD44-232ENST00000531118 TRBV6-6A0A0A6YYG2 114 aa5.86□□□□□ -1.47
CD44-232ENST00000531118 IGKV1-6A0A0C4DH72 117 aa5.86□□□□□ -1.47
CD44-232ENST00000531118 TGOLN2O43493 480 aa5.86□□□□□ -1.47
CD44-232ENST00000531118 ZNF207O43670 478 aaKnown RBP5.86□□□□□ -1.47
CD44-232ENST00000531118 DHFRP00374 187 aa5.86□□□□□ -1.47
CD44-232ENST00000531118 CRYGCP07315 174 aa5.86□□□□□ -1.47
CD44-232ENST00000531118 IL6RP08887 468 aaPredicted RBP5.86□□□□□ -1.47
CD44-232ENST00000531118 HIST1H1BP16401 226 aaKnown RBP5.86□□□□□ -1.47
CD44-232ENST00000531118 RPL27AP46776 148 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms