RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 SRSF4Q08170 494 aaKnown RBP12.03□□□□□ -0.48
CCS-206ENST00000530961 PJVKQ0ZLH3 352 aa12.03□□□□□ -0.48
CCS-206ENST00000530961 ZNF846Q147U1 533 aa12.03□□□□□ -0.48
CCS-206ENST00000530961 VKORC1L1Q8N0U8 176 aa12.03□□□□□ -0.48
CCS-206ENST00000530961 DMBX1Q8NFW5 382 aa12.03□□□□□ -0.48
CCS-206ENST00000530961 TMEM167AQ8TBQ9 72 aa12.03□□□□□ -0.48
CCS-206ENST00000530961 ARPC1AQ92747 370 aa12.03□□□□□ -0.48
CCS-206ENST00000530961 TMEM68Q96MH6 324 aa12.03□□□□□ -0.48
CCS-206ENST00000530961 LINC00527Q9UJ94 153 aa12.03□□□□□ -0.48
CCS-206ENST00000530961 TRAV41A0A0B4J266 112 aa12.02□□□□□ -0.49
CCS-206ENST00000530961 KBTBD11O94819 623 aa12.02□□□□□ -0.49
CCS-206ENST00000530961 FGF2P09038 288 aa12.02□□□□□ -0.49
CCS-206ENST00000530961 MAS1LP35410 378 aa12.02□□□□□ -0.49
CCS-206ENST00000530961 NDPQ00604 133 aa12.02□□□□□ -0.49
CCS-206ENST00000530961 AKIRIN2Q53H80 203 aa12.02□□□□□ -0.49
CCS-206ENST00000530961 OR4A47Q6IF82 309 aa12.02□□□□□ -0.49
CCS-206ENST00000530961 TEX38Q6PEX7 206 aa12.02□□□□□ -0.49
CCS-206ENST00000530961 SSX9Q7RTT3 188 aa12.02□□□□□ -0.49
CCS-206ENST00000530961 ZNF329Q86UD4 541 aa12.02□□□□□ -0.49
CCS-206ENST00000530961 R3HDM4Q96D70 268 aa12.02□□□□□ -0.49
CCS-206ENST00000530961 ZNF430Q9H8G1 570 aaPredicted RBP12.02□□□□□ -0.49
CCS-206ENST00000530961 KCNIP3Q9Y2W7 256 aa12.02□□□□□ -0.49
CCS-206ENST00000530961 NUBP2Q9Y5Y2 271 aa12.02□□□□□ -0.49
CCS-206ENST00000530961 KMT2CQ8NEZ4 4911 aaKnown RBP12.02□□□□□ -0.49
CCS-206ENST00000530961 TEX13DA0A0J9YY54 714 aaPredicted RBP12.01□□□□□ -0.49
CCS-206ENST00000530961 LINC00854A0A1B0GVQ3 168 aa12.01□□□□□ -0.49
CCS-206ENST00000530961 MARCH11A6NNE9 402 aa12.01□□□□□ -0.49
CCS-206ENST00000530961 ARPC1BO15143 372 aaKnown RBP12.01□□□□□ -0.49
CCS-206ENST00000530961 ATG12O94817 140 aa12.01□□□□□ -0.49
CCS-206ENST00000530961 KRASP01116 189 aa12.01□□□□□ -0.49
CCS-206ENST00000530961 OPN1MWP04001 364 aa12.01□□□□□ -0.49
CCS-206ENST00000530961 IL6RP08887 468 aaPredicted RBP12.01□□□□□ -0.49
CCS-206ENST00000530961 OPN1MW2P0DN77 364 aa12.01□□□□□ -0.49
CCS-206ENST00000530961 OPN1MW3P0DN78 364 aa12.01□□□□□ -0.49
CCS-206ENST00000530961 CD28P10747 220 aa12.01□□□□□ -0.49
CCS-206ENST00000530961 EGR2P11161 476 aaPredicted RBP12.01□□□□□ -0.49
CCS-206ENST00000530961 GNB1P62873 340 aa12.01□□□□□ -0.49
CCS-206ENST00000530961 CD83Q01151 205 aa12.01□□□□□ -0.49
CCS-206ENST00000530961 CFHR3Q02985 330 aa12.01□□□□□ -0.49
CCS-206ENST00000530961 RBMS2Q15434 407 aaKnown RBP12.01□□□□□ -0.49
CCS-206ENST00000530961 MRGPRG-AS1Q2M3A8 158 aa12.01□□□□□ -0.49
CCS-206ENST00000530961 PRR31Q5SQ13 230 aa12.01□□□□□ -0.49
CCS-206ENST00000530961 SGPP2Q8IWX5 399 aa12.01□□□□□ -0.49
CCS-206ENST00000530961 MINDY2Q8NBR6 621 aa12.01□□□□□ -0.49
CCS-206ENST00000530961 ABHD5Q8WTS1 349 aa12.01□□□□□ -0.49
CCS-206ENST00000530961 NAA60Q9H7X0 242 aa12.01□□□□□ -0.49
CCS-206ENST00000530961 VSIG4Q9Y279 399 aa12.01□□□□□ -0.49
CCS-206ENST00000530961 WSB1Q9Y6I7 421 aa12.01□□□□□ -0.49
CCS-206ENST00000530961 CRYM-AS1A6NIL9 109 aa12□□□□□ -0.49
CCS-206ENST00000530961 G3V318 75 aa12□□□□□ -0.49
CCS-206ENST00000530961 UPK2O00526 184 aa12□□□□□ -0.49
CCS-206ENST00000530961 IGHG4P01861 327 aa12□□□□□ -0.49
CCS-206ENST00000530961 ELANEP08246 267 aa12□□□□□ -0.49
CCS-206ENST00000530961 UCP1P25874 307 aa12□□□□□ -0.49
CCS-206ENST00000530961 PPIFP30405 207 aaKnown RBP12□□□□□ -0.49
CCS-206ENST00000530961 RPL8P62917 257 aaKnown RBP12□□□□□ -0.49
CCS-206ENST00000530961 SSBP2P81877 361 aaPredicted RBP12□□□□□ -0.49
CCS-206ENST00000530961 DHODHQ02127 395 aa12□□□□□ -0.49
CCS-206ENST00000530961 FOXE3Q13461 319 aa12□□□□□ -0.49
CCS-206ENST00000530961 TNXAQ16473 311 aa12□□□□□ -0.49
CCS-206ENST00000530961 C11orf44Q8N8P7 122 aa12□□□□□ -0.49
CCS-206ENST00000530961 GRPEL2Q8TAA5 225 aa12□□□□□ -0.49
CCS-206ENST00000530961 GALNT14Q96FL9 552 aa12□□□□□ -0.49
CCS-206ENST00000530961 TP53RKQ96S44 253 aa12□□□□□ -0.49
CCS-206ENST00000530961 SPIN2AQ99865 258 aa12□□□□□ -0.49
CCS-206ENST00000530961 SPIN2BQ9BPZ2 258 aa12□□□□□ -0.49
CCS-206ENST00000530961 TMEM140Q9NV12 185 aa12□□□□□ -0.49
CCS-206ENST00000530961 FBXO7Q9Y3I1 522 aa12□□□□□ -0.49
CCS-206ENST00000530961 TCRBV4S1A1TA0A5B7 111 aa11.99□□□□□ -0.49
CCS-206ENST00000530961 PLA2G10O15496 165 aa11.99□□□□□ -0.49
CCS-206ENST00000530961 HLA-GP17693 338 aa11.99□□□□□ -0.49
CCS-206ENST00000530961 G6PCP35575 357 aa11.99□□□□□ -0.49
CCS-206ENST00000530961 ECSCRQ19T08 205 aa11.99□□□□□ -0.49
CCS-206ENST00000530961 TRIM16LQ309B1 348 aa11.99□□□□□ -0.49
CCS-206ENST00000530961 SP6Q3SY56 376 aa11.99□□□□□ -0.49
CCS-206ENST00000530961 C19orf54Q5BKX5 351 aa11.99□□□□□ -0.49
CCS-206ENST00000530961 TCTEX1D4Q5JR98 221 aa11.99□□□□□ -0.49
CCS-206ENST00000530961 UNQ5815/PRO19632Q6UWF5 114 aa11.99□□□□□ -0.49
CCS-206ENST00000530961 C10orf99Q6UWK7 81 aa11.99□□□□□ -0.49
CCS-206ENST00000530961 NDUFA11Q86Y39 141 aa11.99□□□□□ -0.49
CCS-206ENST00000530961 RNF152Q8N8N0 203 aa11.99□□□□□ -0.49
CCS-206ENST00000530961 ADAD2Q8NCV1 583 aaKnown RBP11.99□□□□□ -0.49
CCS-206ENST00000530961 LFNGQ8NES3 379 aa11.99□□□□□ -0.49
CCS-206ENST00000530961 OR5M8Q8NGP6 311 aa11.99□□□□□ -0.49
CCS-206ENST00000530961 SRSF12Q8WXF0 261 aaKnown RBP11.99□□□□□ -0.49
CCS-206ENST00000530961 SEC22AQ96IW7 307 aa11.99□□□□□ -0.49
CCS-206ENST00000530961 TSC22D3Q99576 134 aa11.99□□□□□ -0.49
CCS-206ENST00000530961 CITED2Q99967 270 aaPredicted RBP11.99□□□□□ -0.49
CCS-206ENST00000530961 FAM103A1Q9BTL3 118 aaKnown RBP11.99□□□□□ -0.49
CCS-206ENST00000530961 TMEM222Q9H0R3 208 aa11.99□□□□□ -0.49
CCS-206ENST00000530961 ZFP57Q9NU63 452 aa11.99□□□□□ -0.49
CCS-206ENST00000530961 FOXA2Q9Y261 457 aaPredicted RBP11.99□□□□□ -0.49
CCS-206ENST00000530961 RYR3Q15413 4870 aa11.98□□□□□ -0.49
CCS-206ENST00000530961 PIGBOS1A0A0B4J2F0 54 aa11.98□□□□□ -0.49
CCS-206ENST00000530961 MSGN1A6NI15 193 aa11.98□□□□□ -0.49
CCS-206ENST00000530961 M0QZ24 198 aa11.98□□□□□ -0.49
CCS-206ENST00000530961 LYRM1O43325 122 aa11.98□□□□□ -0.49
CCS-206ENST00000530961 SNAPC5O75971 98 aa11.98□□□□□ -0.49
CCS-206ENST00000530961 NDUFB6O95139 128 aa11.98□□□□□ -0.49
CCS-206ENST00000530961 CDS2O95674 445 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms