RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 TMEM231Q9H6L2 316 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 DYNLRB1Q9NP97 96 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 ENY2Q9NPA8 101 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 MANBALQ9NQG1 85 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 SIRT7Q9NRC8 400 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 TMEM14BQ9NUH8 114 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 CISD1Q9NZ45 108 aaKnown RBP4.57□□□□□ -1.68
PCF11-205ENST00000530906 SLC25A10Q9UBX3 287 aaPredicted RBP4.57□□□□□ -1.68
PCF11-205ENST00000530906 WDR83OSQ9Y284 106 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 PPIAL4AQ9Y536 164 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 MUC3AQ02505 3323 aa4.57□□□□□ -1.68
PCF11-205ENST00000530906 ACACAQ13085 2346 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 CACNA1DQ01668 2161 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 ZFHX2Q9C0A1 2572 aaPredicted RBP4.56□□□□□ -1.68
PCF11-205ENST00000530906 A0A087X0M5 115 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 SAA2-SAA4A0A096LPE2 208 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 IGHV3-43A0A0B4J1X8 118 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 UBE2L5PA0A1B0GUS4 154 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 LOC102723971A0A1B0GUV8 181 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 A0A1B0GX30 115 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 SMCO3A2RU48 225 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 C7orf77A4D0Y5 90 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 MAP1LC3B2A6NCE7 125 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 C15orf62A8K5M9 175 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 PMS2P5A8MQ11 134 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 DEFB108AA8MXU0 73 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 SHISA9B4DS77 424 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 SEC14L6B5MCN3 397 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 TNFRSF13BO14836 293 aaPredicted RBP4.56□□□□□ -1.68
PCF11-205ENST00000530906 CYB5BO43169 146 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 TGOLN2O43493 480 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 NDUFB3O43676 98 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 PROP1O75360 226 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 C1QL1O75973 258 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 CYB5R3P00387 301 aaPredicted RBP4.56□□□□□ -1.68
PCF11-205ENST00000530906 IFNA17P01571 189 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 SRP19P09132 144 aaKnown RBP4.56□□□□□ -1.68
PCF11-205ENST00000530906 SAA2P0DJI9 122 aaPredicted RBP4.56□□□□□ -1.68
PCF11-205ENST00000530906 IGHV3-43DP0DP04 118 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 IL3RAP26951 378 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 CD1BP29016 333 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 MAS1LP35410 378 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 OPRK1P41145 380 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 VDAC2P45880 294 aaPredicted RBP4.56□□□□□ -1.68
PCF11-205ENST00000530906 NPBWR1P48145 328 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 PSMB3P49720 205 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 FHITP49789 147 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 PPOXP50336 477 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 RAB13P51153 203 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 ZNF137PP52743 207 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 HSPE1P61604 102 aaKnown RBP4.56□□□□□ -1.68
PCF11-205ENST00000530906 RPL31P62899 125 aaKnown RBP4.56□□□□□ -1.68
PCF11-205ENST00000530906 RUNX1Q01196 453 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 ARL16Q0P5N6 197 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 RAB31Q13636 194 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 IZUMO4Q1ZYL8 232 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 ACOT6Q3I5F7 207 aaPredicted RBP4.56□□□□□ -1.68
PCF11-205ENST00000530906 AWAT1Q58HT5 328 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 OR2B11Q5JQS5 317 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 AVPI1Q5T686 147 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 OR8G2PQ6IF36 304 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 BTNL3Q6UXE8 466 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 ZNF833PQ6ZTB9 187 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 OR5B3Q8NH48 314 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 TMEM186Q96B77 213 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 MALSU1Q96EH3 234 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 ZNF714Q96N38 554 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 C8orf49Q96NF6 230 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 WFIKKN1Q96NZ8 548 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 CCL13Q99616 98 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 DCTN5Q9BTE1 182 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 RSG1Q9BU20 258 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 ACTR3CQ9C0K3 210 aaPredicted RBP4.56□□□□□ -1.68
PCF11-205ENST00000530906 MAP1LC3BQ9GZQ8 125 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 HEYLQ9NQ87 328 aaPredicted RBP4.56□□□□□ -1.68
PCF11-205ENST00000530906 RPRMQ9NS64 109 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 TMEM106BQ9NUM4 274 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 TMEM140Q9NV12 185 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 TMEM242Q9NWH2 141 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 BET1LQ9NYM9 111 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 MLXQ9UH92 298 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 VAX2Q9UIW0 290 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 DYSFO75923 2080 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 DSCAMO60469 2012 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 WDFY3Q8IZQ1 3526 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 APC2O95996 2303 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 PLCE1Q9P212 2302 aa4.56□□□□□ -1.68
PCF11-205ENST00000530906 ZGRF1Q86YA3 2104 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 CFAP54Q96N23 3096 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 IGHV1-69-2A0A0G2JMI3 117 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 C9JQL5 133 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 M0R036 132 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 NXPH3O95157 252 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 IFNA10P01566 189 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 GYPAP02724 150 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 IL6RP08887 468 aaPredicted RBP4.55□□□□□ -1.68
PCF11-205ENST00000530906 CTRB1P17538 263 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 NDUFB7P17568 137 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 FGF7P21781 194 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 MC5RP33032 325 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms