RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 BET1LQ9NYM9 111 aa16.78■□□□□ 0.28
CAPN1-220ENST00000530567 ANK2Q01484 3957 aa16.77■□□□□ 0.28
CAPN1-220ENST00000530567 TEX13DA0A0J9YY54 714 aaPredicted RBP16.77■□□□□ 0.27
CAPN1-220ENST00000530567 RPA2P15927 270 aa16.77■□□□□ 0.27
CAPN1-220ENST00000530567 CRIP2P52943 208 aaPredicted RBP16.77■□□□□ 0.27
CAPN1-220ENST00000530567 CFHR3Q02985 330 aa16.77■□□□□ 0.27
CAPN1-220ENST00000530567 C19orf54Q5BKX5 351 aa16.77■□□□□ 0.27
CAPN1-220ENST00000530567 TMED4Q7Z7H5 227 aa16.77■□□□□ 0.27
CAPN1-220ENST00000530567 GLYATL2Q8WU03 294 aa16.77■□□□□ 0.27
CAPN1-220ENST00000530567 AIFM2Q9BRQ8 373 aa16.77■□□□□ 0.27
CAPN1-220ENST00000530567 TMEM140Q9NV12 185 aa16.77■□□□□ 0.27
CAPN1-220ENST00000530567 TRAV3A0A0B4J244 114 aa16.76■□□□□ 0.27
CAPN1-220ENST00000530567 B3GALNT1O75752 331 aa16.76■□□□□ 0.27
CAPN1-220ENST00000530567 KRASP01116 189 aa16.76■□□□□ 0.27
CAPN1-220ENST00000530567 SERPINE2P07093 398 aa16.76■□□□□ 0.27
CAPN1-220ENST00000530567 AKR1C4P17516 323 aa16.76■□□□□ 0.27
CAPN1-220ENST00000530567 SLC6A1P30531 599 aa16.76■□□□□ 0.27
CAPN1-220ENST00000530567 G6PCP35575 357 aa16.76■□□□□ 0.27
CAPN1-220ENST00000530567 GNB1P62873 340 aa16.76■□□□□ 0.27
CAPN1-220ENST00000530567 FXYD3Q14802 87 aa16.76■□□□□ 0.27
CAPN1-220ENST00000530567 CADM3Q8N126 398 aa16.76■□□□□ 0.27
CAPN1-220ENST00000530567 C3orf56Q8N813 242 aa16.76■□□□□ 0.27
CAPN1-220ENST00000530567 SPATA3Q8NHX4 192 aa16.76■□□□□ 0.27
CAPN1-220ENST00000530567 LHFPL5Q8TAF8 219 aa16.76■□□□□ 0.27
CAPN1-220ENST00000530567 CHPT1Q8WUD6 406 aa16.76■□□□□ 0.27
CAPN1-220ENST00000530567 ARPC1AQ92747 370 aa16.76■□□□□ 0.27
CAPN1-220ENST00000530567 GALNT14Q96FL9 552 aa16.76■□□□□ 0.27
CAPN1-220ENST00000530567 SEC22AQ96IW7 307 aa16.76■□□□□ 0.27
CAPN1-220ENST00000530567 TMEM222Q9H0R3 208 aa16.76■□□□□ 0.27
CAPN1-220ENST00000530567 FLVCR2Q9UPI3 526 aa16.76■□□□□ 0.27
CAPN1-220ENST00000530567 C10orf55Q5SWW7 151 aa16.75■□□□□ 0.27
CAPN1-220ENST00000530567 SGPP2Q8IWX5 399 aa16.75■□□□□ 0.27
CAPN1-220ENST00000530567 MMD2Q8IY49 270 aa16.75■□□□□ 0.27
CAPN1-220ENST00000530567 DMBX1Q8NFW5 382 aa16.75■□□□□ 0.27
CAPN1-220ENST00000530567 OR4A5Q8NH83 315 aa16.75■□□□□ 0.27
CAPN1-220ENST00000530567 CITED1Q99966 193 aa16.75■□□□□ 0.27
CAPN1-220ENST00000530567 FAM103A1Q9BTL3 118 aaKnown RBP16.75■□□□□ 0.27
CAPN1-220ENST00000530567 PSMB11A5LHX3 300 aa16.74■□□□□ 0.27
CAPN1-220ENST00000530567 G3V318 75 aa16.74■□□□□ 0.27
CAPN1-220ENST00000530567 UPK2O00526 184 aa16.74■□□□□ 0.27
CAPN1-220ENST00000530567 IGKV1-5P01602 117 aa16.74■□□□□ 0.27
CAPN1-220ENST00000530567 ERVK-16P61578 105 aa16.74■□□□□ 0.27
CAPN1-220ENST00000530567 DHODHQ02127 395 aa16.74■□□□□ 0.27
CAPN1-220ENST00000530567 TNXAQ16473 311 aa16.74■□□□□ 0.27
CAPN1-220ENST00000530567 HIST2H2BDQ6DRA6 164 aa16.74■□□□□ 0.27
CAPN1-220ENST00000530567 ZNF329Q86UD4 541 aa16.74■□□□□ 0.27
CAPN1-220ENST00000530567 CENPSQ8N2Z9 138 aa16.74■□□□□ 0.27
CAPN1-220ENST00000530567 SGMS2Q8NHU3 365 aa16.74■□□□□ 0.27
CAPN1-220ENST00000530567 GRPEL2Q8TAA5 225 aa16.74■□□□□ 0.27
CAPN1-220ENST00000530567 NUBP2Q9Y5Y2 271 aa16.74■□□□□ 0.27
CAPN1-220ENST00000530567 WSB1Q9Y6I7 421 aa16.74■□□□□ 0.27
CAPN1-220ENST00000530567 DNHD1Q96M86 4753 aa16.74■□□□□ 0.27
CAPN1-220ENST00000530567 CREBL2O60519 120 aaPredicted RBP16.73■□□□□ 0.27
CAPN1-220ENST00000530567 CDS2O95674 445 aa16.73■□□□□ 0.27
CAPN1-220ENST00000530567 P0C879 139 aa16.73■□□□□ 0.27
CAPN1-220ENST00000530567 TMEM187Q14656 261 aa16.73■□□□□ 0.27
CAPN1-220ENST00000530567 TRIM16LQ309B1 348 aa16.73■□□□□ 0.27
CAPN1-220ENST00000530567 TCTEX1D4Q5JR98 221 aa16.73■□□□□ 0.27
CAPN1-220ENST00000530567 CENPVQ7Z7K6 275 aaPredicted RBP16.73■□□□□ 0.27
CAPN1-220ENST00000530567 SLC25A42Q86VD7 318 aa16.73■□□□□ 0.27
CAPN1-220ENST00000530567 PRR13Q9NZ81 148 aa16.73■□□□□ 0.27
CAPN1-220ENST00000530567 TRAV41A0A0B4J266 112 aa16.72■□□□□ 0.27
CAPN1-220ENST00000530567 A0A1B0GW64 132 aa16.72■□□□□ 0.27
CAPN1-220ENST00000530567 CNIH1O95406 144 aa16.72■□□□□ 0.27
CAPN1-220ENST00000530567 OR9G9P0C7N8 305 aa16.72■□□□□ 0.27
CAPN1-220ENST00000530567 CD28P10747 220 aa16.72■□□□□ 0.27
CAPN1-220ENST00000530567 MYOD1P15172 320 aa16.72■□□□□ 0.27
CAPN1-220ENST00000530567 VDAC1P21796 283 aa16.72■□□□□ 0.27
CAPN1-220ENST00000530567 PPIFP30405 207 aaKnown RBP16.72■□□□□ 0.27
CAPN1-220ENST00000530567 RPL8P62917 257 aaKnown RBP16.72■□□□□ 0.27
CAPN1-220ENST00000530567 TMEM128Q5BJH2 165 aa16.72■□□□□ 0.27
CAPN1-220ENST00000530567 C11orf44Q8N8P7 122 aa16.72■□□□□ 0.27
CAPN1-220ENST00000530567 OR5AU1Q8NGC0 362 aa16.72■□□□□ 0.27
CAPN1-220ENST00000530567 ABHD5Q8WTS1 349 aa16.72■□□□□ 0.27
CAPN1-220ENST00000530567 SRSF12Q8WXF0 261 aaKnown RBP16.72■□□□□ 0.27
CAPN1-220ENST00000530567 E7EUB6 86 aa16.71■□□□□ 0.27
CAPN1-220ENST00000530567 FGF2P09038 288 aa16.71■□□□□ 0.27
CAPN1-220ENST00000530567 HLA-GP17693 338 aa16.71■□□□□ 0.27
CAPN1-220ENST00000530567 PPP1R1AQ13522 171 aa16.71■□□□□ 0.27
CAPN1-220ENST00000530567 ECSCRQ19T08 205 aa16.71■□□□□ 0.27
CAPN1-220ENST00000530567 ASPHD1Q5U4P2 390 aa16.71■□□□□ 0.27
CAPN1-220ENST00000530567 MINDY2Q8NBR6 621 aa16.71■□□□□ 0.27
CAPN1-220ENST00000530567 TMEM56Q96MV1 263 aa16.71■□□□□ 0.27
CAPN1-220ENST00000530567 C20orf85Q9H1P6 137 aa16.71■□□□□ 0.27
CAPN1-220ENST00000530567 TMEM56-RWDD3S4R434 201 aa16.71■□□□□ 0.27
CAPN1-220ENST00000530567 CGB1A6NKQ9 187 aa16.7■□□□□ 0.26
CAPN1-220ENST00000530567 SOX15O60248 233 aa16.7■□□□□ 0.26
CAPN1-220ENST00000530567 TCRBP04435 133 aa16.7■□□□□ 0.26
CAPN1-220ENST00000530567 MAS1LP35410 378 aa16.7■□□□□ 0.26
CAPN1-220ENST00000530567 IZUMO4Q1ZYL8 232 aa16.7■□□□□ 0.26
CAPN1-220ENST00000530567 MZT2BQ6NZ67 158 aa16.7■□□□□ 0.26
CAPN1-220ENST00000530567 SHISA2Q6UWI4 295 aa16.7■□□□□ 0.26
CAPN1-220ENST00000530567 SELENOHQ8IZQ5 122 aaKnown RBP16.7■□□□□ 0.26
CAPN1-220ENST00000530567 LFNGQ8NES3 379 aa16.7■□□□□ 0.26
CAPN1-220ENST00000530567 KCNIP3Q9Y2W7 256 aa16.7■□□□□ 0.26
CAPN1-220ENST00000530567 NSG2Q9Y328 171 aa16.7■□□□□ 0.26
CAPN1-220ENST00000530567 A0A0G2JRQ6 117 aa16.7■□□□□ 0.26
CAPN1-220ENST00000530567 FBXO24O75426 580 aa16.7■□□□□ 0.26
CAPN1-220ENST00000530567 ACTL6BO94805 426 aa16.7■□□□□ 0.26
CAPN1-220ENST00000530567 IGHG4P01861 327 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms