RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 POU2AF1Q16633 256 aa9.86□□□□□ -0.83
CCDC90B-216ENST00000529856 PHLDA2Q53GA4 152 aa9.86□□□□□ -0.83
CCDC90B-216ENST00000529856 ASPHD1Q5U4P2 390 aa9.86□□□□□ -0.83
CCDC90B-216ENST00000529856 MRPL41Q8IXM3 137 aaKnown RBP9.86□□□□□ -0.83
CCDC90B-216ENST00000529856 LINC00482Q8N8I6 264 aa9.86□□□□□ -0.83
CCDC90B-216ENST00000529856 OR5T1Q8NG75 326 aa9.86□□□□□ -0.83
CCDC90B-216ENST00000529856 OR4D10Q8NGI6 311 aa9.86□□□□□ -0.83
CCDC90B-216ENST00000529856 TERB2Q8NHR7 220 aa9.86□□□□□ -0.83
CCDC90B-216ENST00000529856 C4orf3Q8WVX3 66 aa9.86□□□□□ -0.83
CCDC90B-216ENST00000529856 SRSF12Q8WXF0 261 aaKnown RBP9.86□□□□□ -0.83
CCDC90B-216ENST00000529856 RAX2Q96IS3 184 aa9.86□□□□□ -0.83
CCDC90B-216ENST00000529856 P2RX4Q99571 388 aa9.86□□□□□ -0.83
CCDC90B-216ENST00000529856 PLEKHA2Q9HB19 425 aa9.86□□□□□ -0.83
CCDC90B-216ENST00000529856 NDUFA13Q9P0J0 144 aa9.86□□□□□ -0.83
CCDC90B-216ENST00000529856 VSIG4Q9Y279 399 aa9.86□□□□□ -0.83
CCDC90B-216ENST00000529856 G3V4G9 280 aa9.85□□□□□ -0.83
CCDC90B-216ENST00000529856 CCL24O00175 119 aa9.85□□□□□ -0.83
CCDC90B-216ENST00000529856 BRI3O95415 125 aa9.85□□□□□ -0.83
CCDC90B-216ENST00000529856 IL6RP08887 468 aaPredicted RBP9.85□□□□□ -0.83
CCDC90B-216ENST00000529856 ZNF735P0CB33 412 aa9.85□□□□□ -0.83
CCDC90B-216ENST00000529856 NQO2P16083 231 aa9.85□□□□□ -0.83
CCDC90B-216ENST00000529856 S100GP29377 79 aa9.85□□□□□ -0.83
CCDC90B-216ENST00000529856 CD40LGP29965 261 aa9.85□□□□□ -0.83
CCDC90B-216ENST00000529856 S100A5P33763 92 aa9.85□□□□□ -0.83
CCDC90B-216ENST00000529856 MAS1LP35410 378 aa9.85□□□□□ -0.83
CCDC90B-216ENST00000529856 RUNX1Q01196 453 aa9.85□□□□□ -0.83
CCDC90B-216ENST00000529856 MEF2DQ14814 521 aa9.85□□□□□ -0.83
CCDC90B-216ENST00000529856 ZNF585BQ52M93 769 aa9.85□□□□□ -0.83
CCDC90B-216ENST00000529856 SAMD5Q5TGI4 173 aa9.85□□□□□ -0.83
CCDC90B-216ENST00000529856 OR4A47Q6IF82 309 aa9.85□□□□□ -0.83
CCDC90B-216ENST00000529856 SSX9Q7RTT3 188 aa9.85□□□□□ -0.83
CCDC90B-216ENST00000529856 OR4A5Q8NH83 315 aa9.85□□□□□ -0.83
CCDC90B-216ENST00000529856 CASTOR1Q8WTX7 329 aa9.85□□□□□ -0.83
CCDC90B-216ENST00000529856 MS4A10Q96PG2 267 aa9.85□□□□□ -0.83
CCDC90B-216ENST00000529856 DUX3Q96PT4 197 aa9.85□□□□□ -0.83
CCDC90B-216ENST00000529856 PHB2Q99623 299 aa9.85□□□□□ -0.83
CCDC90B-216ENST00000529856 SLA2Q9H6Q3 261 aa9.85□□□□□ -0.83
CCDC90B-216ENST00000529856 GNB4Q9HAV0 340 aa9.85□□□□□ -0.83
CCDC90B-216ENST00000529856 BET1LQ9NYM9 111 aa9.85□□□□□ -0.83
CCDC90B-216ENST00000529856 COMMD9Q9P000 198 aa9.85□□□□□ -0.83
CCDC90B-216ENST00000529856 ANKRD20A5PA0PJZ0 165 aa9.84□□□□□ -0.83
CCDC90B-216ENST00000529856 DPPA5A6NC42 116 aa9.84□□□□□ -0.83
CCDC90B-216ENST00000529856 H3BUA1 57 aa9.84□□□□□ -0.83
CCDC90B-216ENST00000529856 I3L521 148 aa9.84□□□□□ -0.83
CCDC90B-216ENST00000529856 S1PR2O95136 353 aa9.84□□□□□ -0.83
CCDC90B-216ENST00000529856 LPAR6P43657 344 aa9.84□□□□□ -0.83
CCDC90B-216ENST00000529856 RND3P61587 244 aa9.84□□□□□ -0.83
CCDC90B-216ENST00000529856 DEFB136Q30KP8 78 aa9.84□□□□□ -0.83
CCDC90B-216ENST00000529856 OXLD1Q5BKU9 147 aa9.84□□□□□ -0.83
CCDC90B-216ENST00000529856 TBC1D26Q86UD7 250 aa9.84□□□□□ -0.83
CCDC90B-216ENST00000529856 C1QL4Q86Z23 238 aa9.84□□□□□ -0.83
CCDC90B-216ENST00000529856 ZNF486Q96H40 463 aaPredicted RBP9.84□□□□□ -0.83
CCDC90B-216ENST00000529856 SPIN2AQ99865 258 aa9.84□□□□□ -0.83
CCDC90B-216ENST00000529856 SPIN2BQ9BPZ2 258 aa9.84□□□□□ -0.83
CCDC90B-216ENST00000529856 SLC2A9Q9NRM0 540 aa9.84□□□□□ -0.83
CCDC90B-216ENST00000529856 FAM212BQ9NTI7 297 aaPredicted RBP9.84□□□□□ -0.83
CCDC90B-216ENST00000529856 DISC1C4P0D8 188 aa9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 UPK2O00526 184 aa9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 MPPED1O15442 326 aa9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 TRGV3P03979 118 aa9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 OR9G9P0C7N8 305 aa9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 AKAIN1P0CW23 69 aa9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 APELAP0DMC3 54 aa9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 PGAM2P15259 253 aa9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 IGLL1P15814 213 aa9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 HLA-GP17693 338 aa9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 PTBP1P26599 531 aaKnown RBP eCLIP9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 TPPP2P59282 170 aa9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 RPL8P62917 257 aaKnown RBP9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 SCGB2B2Q4G0G5 96 aa9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 C10orf55Q5SWW7 151 aa9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 FOXB2Q5VYV0 432 aa9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 FAAP20Q6NZ36 180 aa9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 CCDC190Q86UF4 302 aa9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 CADM3Q8N126 398 aa9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 ADAD2Q8NCV1 583 aaKnown RBP9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 DMBX1Q8NFW5 382 aa9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 OR11H1Q8NG94 326 aa9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 OR4C16Q8NGL9 310 aa9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 OR5B12Q96R08 314 aa9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 THAP7Q9BT49 309 aaPredicted RBP9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 HRASLSQ9HDD0 168 aa9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 ZNF355PQ9NSJ1 428 aa9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 TMEM140Q9NV12 185 aa9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 V9GYH0 126 aa9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 NOTCH3Q9UM47 2321 aa9.83□□□□□ -0.84
CCDC90B-216ENST00000529856 MEGF8Q7Z7M0 2845 aa9.82□□□□□ -0.84
CCDC90B-216ENST00000529856 TRAV3A0A0B4J244 114 aa9.82□□□□□ -0.84
CCDC90B-216ENST00000529856 TEX22C9J3V5 150 aa9.82□□□□□ -0.84
CCDC90B-216ENST00000529856 E7EUB6 86 aa9.82□□□□□ -0.84
CCDC90B-216ENST00000529856 FGF2P09038 288 aa9.82□□□□□ -0.84
CCDC90B-216ENST00000529856 RPA2P15927 270 aa9.82□□□□□ -0.84
CCDC90B-216ENST00000529856 PI3P19957 117 aa9.82□□□□□ -0.84
CCDC90B-216ENST00000529856 RPL27AP46776 148 aaKnown RBP9.82□□□□□ -0.84
CCDC90B-216ENST00000529856 PPP5CP53041 499 aa9.82□□□□□ -0.84
CCDC90B-216ENST00000529856 PIGPP57054 158 aa9.82□□□□□ -0.84
CCDC90B-216ENST00000529856 ERVK-16P61578 105 aa9.82□□□□□ -0.84
CCDC90B-216ENST00000529856 DEFA6Q01524 100 aa9.82□□□□□ -0.84
CCDC90B-216ENST00000529856 FHL3Q13643 280 aa9.82□□□□□ -0.84
CCDC90B-216ENST00000529856 BEAN1Q3B7T3 259 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms