RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 SHOXO15266 292 aa12.54□□□□□ -0.4
CCDC90B-213ENST00000529611 SAA1P0DJI8 122 aaPredicted RBP12.54□□□□□ -0.4
CCDC90B-213ENST00000529611 EFNA4P52798 201 aa12.54□□□□□ -0.4
CCDC90B-213ENST00000529611 ZNF616Q08AN1 781 aa12.54□□□□□ -0.4
CCDC90B-213ENST00000529611 TUSC1Q2TAM9 212 aa12.54□□□□□ -0.4
CCDC90B-213ENST00000529611 LRRC75BQ2VPJ9 315 aa12.54□□□□□ -0.4
CCDC90B-213ENST00000529611 HLA-DRB5Q30154 266 aa12.54□□□□□ -0.4
CCDC90B-213ENST00000529611 TMEM177Q53S58 311 aa12.54□□□□□ -0.4
CCDC90B-213ENST00000529611 TGIF2LXQ8IUE1 241 aa12.54□□□□□ -0.4
CCDC90B-213ENST00000529611 BPIFCQ8NFQ6 507 aa12.54□□□□□ -0.4
CCDC90B-213ENST00000529611 SSBP3Q9BWW4 388 aaPredicted RBP12.54□□□□□ -0.4
CCDC90B-213ENST00000529611 CLEC7AQ9BXN2 247 aa12.54□□□□□ -0.4
CCDC90B-213ENST00000529611 PARD6GQ9BYG4 376 aaPredicted RBP12.54□□□□□ -0.4
CCDC90B-213ENST00000529611 TACC2O95359 2948 aa12.53□□□□□ -0.4
CCDC90B-213ENST00000529611 HSPE1P61604 102 aaKnown RBP12.53□□□□□ -0.4
CCDC90B-213ENST00000529611 RPS16P62249 146 aaKnown RBP12.53□□□□□ -0.4
CCDC90B-213ENST00000529611 SRSF3P84103 164 aaKnown RBP12.53□□□□□ -0.4
CCDC90B-213ENST00000529611 OR10P1Q8NGE3 313 aa12.53□□□□□ -0.4
CCDC90B-213ENST00000529611 FAM213BQ8TBF2 198 aa12.53□□□□□ -0.4
CCDC90B-213ENST00000529611 HARBI1Q96MB7 349 aa12.53□□□□□ -0.4
CCDC90B-213ENST00000529611 PCGF1Q9BSM1 259 aa12.53□□□□□ -0.4
CCDC90B-213ENST00000529611 RSG1Q9BU20 258 aa12.53□□□□□ -0.4
CCDC90B-213ENST00000529611 WDR61Q9GZS3 305 aaKnown RBP12.53□□□□□ -0.4
CCDC90B-213ENST00000529611 BET1LQ9NYM9 111 aa12.53□□□□□ -0.4
CCDC90B-213ENST00000529611 ONECUT1Q9UBC0 465 aa12.53□□□□□ -0.4
CCDC90B-213ENST00000529611 OVOL3O00110 214 aa12.52□□□□□ -0.4
CCDC90B-213ENST00000529611 UPK2O00526 184 aa12.52□□□□□ -0.4
CCDC90B-213ENST00000529611 MYOD1P15172 320 aa12.52□□□□□ -0.4
CCDC90B-213ENST00000529611 IL3RAP26951 378 aa12.52□□□□□ -0.4
CCDC90B-213ENST00000529611 AKR1C1Q04828 323 aa12.52□□□□□ -0.4
CCDC90B-213ENST00000529611 PDPNQ86YL7 162 aa12.52□□□□□ -0.4
CCDC90B-213ENST00000529611 PUSL1Q8N0Z8 303 aaKnown RBP12.52□□□□□ -0.4
CCDC90B-213ENST00000529611 Q8N7P7 452 aa12.52□□□□□ -0.4
CCDC90B-213ENST00000529611 SCGB1C1Q8TD33 95 aa12.52□□□□□ -0.4
CCDC90B-213ENST00000529611 LHX4Q969G2 390 aa12.52□□□□□ -0.4
CCDC90B-213ENST00000529611 PINX1Q96BK5 328 aaKnown RBP12.52□□□□□ -0.4
CCDC90B-213ENST00000529611 FLYWCH2Q96CP2 140 aaKnown RBP12.52□□□□□ -0.4
CCDC90B-213ENST00000529611 CLCC1Q96S66 551 aa12.52□□□□□ -0.4
CCDC90B-213ENST00000529611 AIFM2Q9BRQ8 373 aa12.52□□□□□ -0.4
CCDC90B-213ENST00000529611 HEYLQ9NQ87 328 aaPredicted RBP12.52□□□□□ -0.4
CCDC90B-213ENST00000529611 PRNDQ9UKY0 176 aa12.52□□□□□ -0.4
CCDC90B-213ENST00000529611 UBE2L5PA0A1B0GUS4 154 aa12.52□□□□□ -0.41
CCDC90B-213ENST00000529611 hCG_1809904A0A1W2PP81 198 aa12.52□□□□□ -0.41
CCDC90B-213ENST00000529611 A0A1W2PPE2 198 aa12.52□□□□□ -0.41
CCDC90B-213ENST00000529611 A0A1W2PR64 198 aa12.52□□□□□ -0.41
CCDC90B-213ENST00000529611 A0A1W2PRV1 198 aa12.52□□□□□ -0.41
CCDC90B-213ENST00000529611 OR8U8P0C7N1 319 aa12.52□□□□□ -0.41
CCDC90B-213ENST00000529611 HOXA1P49639 335 aaPredicted RBP12.52□□□□□ -0.41
CCDC90B-213ENST00000529611 PRRX1P54821 245 aa12.52□□□□□ -0.41
CCDC90B-213ENST00000529611 ATP6V1FQ16864 119 aa12.52□□□□□ -0.41
CCDC90B-213ENST00000529611 BEND2Q8NDZ0 799 aa12.52□□□□□ -0.41
CCDC90B-213ENST00000529611 OR4C13Q8NGP0 309 aa12.52□□□□□ -0.41
CCDC90B-213ENST00000529611 TMEM147Q9BVK8 224 aa12.52□□□□□ -0.41
CCDC90B-213ENST00000529611 HIPK2Q9H2X6 1198 aa12.52□□□□□ -0.41
CCDC90B-213ENST00000529611 WASHC3Q9Y3C0 194 aa12.52□□□□□ -0.41
CCDC90B-213ENST00000529611 FBXO7Q9Y3I1 522 aa12.52□□□□□ -0.41
CCDC90B-213ENST00000529611 OR51B2Q9Y5P1 312 aa12.52□□□□□ -0.41
CCDC90B-213ENST00000529611 LOC105371242A0A075B767 164 aa12.51□□□□□ -0.41
CCDC90B-213ENST00000529611 AGPAT2O15120 278 aa12.51□□□□□ -0.41
CCDC90B-213ENST00000529611 GOSR1O95249 250 aa12.51□□□□□ -0.41
CCDC90B-213ENST00000529611 TSPAN15O95858 294 aa12.51□□□□□ -0.41
CCDC90B-213ENST00000529611 IFNA10P01566 189 aa12.51□□□□□ -0.41
CCDC90B-213ENST00000529611 COX7A1P24310 79 aa12.51□□□□□ -0.41
CCDC90B-213ENST00000529611 ZNF843Q8N446 348 aa12.51□□□□□ -0.41
CCDC90B-213ENST00000529611 TAF15Q92804 592 aaKnown RBP eCLIP12.51□□□□□ -0.41
CCDC90B-213ENST00000529611 NARS2Q96I59 477 aaKnown RBP12.51□□□□□ -0.41
CCDC90B-213ENST00000529611 PSMG3Q9BT73 122 aaPredicted RBP12.51□□□□□ -0.41
CCDC90B-213ENST00000529611 BUB1B-PAK6H3BSN5 160 aa12.5□□□□□ -0.41
CCDC90B-213ENST00000529611 KBTBD11O94819 623 aa12.5□□□□□ -0.41
CCDC90B-213ENST00000529611 RAB13P51153 203 aa12.5□□□□□ -0.41
CCDC90B-213ENST00000529611 ARF6P62330 175 aa12.5□□□□□ -0.41
CCDC90B-213ENST00000529611 VWC2Q2TAL6 325 aa12.5□□□□□ -0.41
CCDC90B-213ENST00000529611 AKR1C8PQ5T2L2 129 aa12.5□□□□□ -0.41
CCDC90B-213ENST00000529611 OR4P4Q8NGL7 312 aa12.5□□□□□ -0.41
CCDC90B-213ENST00000529611 TMEM170AQ8WVE7 144 aa12.5□□□□□ -0.41
CCDC90B-213ENST00000529611 TMEM231Q9H6L2 316 aa12.5□□□□□ -0.41
CCDC90B-213ENST00000529611 UQCC1Q9NVA1 299 aa12.5□□□□□ -0.41
CCDC90B-213ENST00000529611 ZNF257Q9Y2Q1 563 aa12.5□□□□□ -0.41
CCDC90B-213ENST00000529611 RRHO14718 337 aa12.5□□□□□ -0.41
CCDC90B-213ENST00000529611 MC5RP33032 325 aa12.5□□□□□ -0.41
CCDC90B-213ENST00000529611 RPP30P78346 268 aaKnown RBP12.5□□□□□ -0.41
CCDC90B-213ENST00000529611 PNKDQ8N490 385 aa12.5□□□□□ -0.41
CCDC90B-213ENST00000529611 IGFBPL1Q8WX77 278 aa12.5□□□□□ -0.41
CCDC90B-213ENST00000529611 FAM96BQ9Y3D0 163 aa12.5□□□□□ -0.41
CCDC90B-213ENST00000529611 TMEM218A2RU14 115 aa12.49□□□□□ -0.41
CCDC90B-213ENST00000529611 M0R1W7 72 aa12.49□□□□□ -0.41
CCDC90B-213ENST00000529611 SCAF4O95104 1147 aaKnown RBP12.49□□□□□ -0.41
CCDC90B-213ENST00000529611 IGLV2-23P01705 113 aa12.49□□□□□ -0.41
CCDC90B-213ENST00000529611 SNCAP37840 140 aa12.49□□□□□ -0.41
CCDC90B-213ENST00000529611 PRCDQ00LT1 54 aa12.49□□□□□ -0.41
CCDC90B-213ENST00000529611 MS4A7Q9GZW8 240 aaPredicted RBP12.49□□□□□ -0.41
CCDC90B-213ENST00000529611 ASH1LQ9NR48 2969 aaKnown RBP12.49□□□□□ -0.41
CCDC90B-213ENST00000529611 IGHV3-72A0A0B4J1Y9 119 aa12.49□□□□□ -0.41
CCDC90B-213ENST00000529611 PRSS46E5RG02 174 aa12.49□□□□□ -0.41
CCDC90B-213ENST00000529611 IGHV2-5P01817 119 aa12.49□□□□□ -0.41
CCDC90B-213ENST00000529611 TLE4Q04727 773 aa12.49□□□□□ -0.41
CCDC90B-213ENST00000529611 COMMD1Q8N668 190 aa12.49□□□□□ -0.41
CCDC90B-213ENST00000529611 HINT2Q9BX68 163 aa12.49□□□□□ -0.41
CCDC90B-213ENST00000529611 SIRT7Q9NRC8 400 aa12.49□□□□□ -0.41
CCDC90B-213ENST00000529611 FKBP11Q9NYL4 201 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms