RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	ZNF488	Q96MN9	340 aa		12.05	□□□□□ -0.48
NR1H3-231	ENST00000529540	GPHA2	Q96T91	129 aa		12.05	□□□□□ -0.48
NR1H3-231	ENST00000529540	RSG1	Q9BU20	258 aa		12.05	□□□□□ -0.48
NR1H3-231	ENST00000529540	TANC2	Q9HCD6	1990 aa		12.04	□□□□□ -0.48
NR1H3-231	ENST00000529540	NDUFS8	O00217	210 aa		12.04	□□□□□ -0.48
NR1H3-231	ENST00000529540	NXPH3	O95157	252 aa		12.04	□□□□□ -0.48
NR1H3-231	ENST00000529540	ATP5J2	P56134	94 aa		12.04	□□□□□ -0.48
NR1H3-231	ENST00000529540	HBG1	P69891	147 aa		12.04	□□□□□ -0.48
NR1H3-231	ENST00000529540	HBG2	P69892	147 aa		12.04	□□□□□ -0.48
NR1H3-231	ENST00000529540	JOSD1	Q15040	202 aa	Predicted RBP	12.04	□□□□□ -0.48
NR1H3-231	ENST00000529540	HAPLN4	Q86UW8	402 aa		12.04	□□□□□ -0.48
NR1H3-231	ENST00000529540	LRRC75A-AS1	Q8N1F1	130 aa		12.04	□□□□□ -0.48
NR1H3-231	ENST00000529540	PSENEN	Q9NZ42	101 aa		12.04	□□□□□ -0.48
NR1H3-231	ENST00000529540	WIPI2	Q9Y4P8	454 aa		12.04	□□□□□ -0.48
NR1H3-231	ENST00000529540	NKX6-3	A6NJ46	265 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	TNFSF12	O43508	249 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	LY86	O95711	162 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	HAND1	O96004	215 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	IGKV1-39	P01597	117 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	IGKV1D-39	P04432	117 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	PFN1	P07737	140 aa	Known RBP	12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	PSG2	P11465	335 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	COL8A2	P25067	703 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	IL2RG	P31785	369 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	PDLIM4	P50479	330 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	ARL16	Q0P5N6	197 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	LBH	Q53QV2	105 aa	Predicted RBP	12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	PDZD11	Q5EBL8	140 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	LCN15	Q6UWW0	184 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	SSX7	Q7RTT5	188 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	BATF2	Q8N1L9	274 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	OR10V1	Q8NGI7	309 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	OR4X1	Q8NH49	305 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	NEK7	Q8TDX7	302 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	MBD6	Q96DN6	1003 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	RHOV	Q96L33	236 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	WDR61	Q9GZS3	305 aa	Known RBP	12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	VSIR	Q9H7M9	311 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	MAP1LC3B2	A6NCE7	125 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	FAM90A26	D6RGX4	464 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540		H3BP45	60 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	SLC33A1	O00400	549 aa	Predicted RBP	12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	WNT9B	O14905	357 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	IGHV4-39	P01824	125 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	EGR1	P18146	543 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	FGF7	P21781	194 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	CEACAM6	P40199	344 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	TMEM155	Q4W5P6	130 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540		Q6ZRM9	215 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	MOB1B	Q7L9L4	216 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	SSX9	Q7RTT3	188 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	OR10J5	Q8NHC4	309 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	RNASE11	Q8TAA1	199 aa	Known RBP	12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	SSX3	Q99909	188 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	MAP1LC3B	Q9GZQ8	125 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	IL36RN	Q9UBH0	155 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	CACNG5	Q9UF02	275 aa		12.03	□□□□□ -0.48
NR1H3-231	ENST00000529540	GCN1	Q92616	2671 aa	Known RBP	12.02	□□□□□ -0.48
NR1H3-231	ENST00000529540	CACNA1D	Q01668	2161 aa		12.02	□□□□□ -0.49
NR1H3-231	ENST00000529540	HRNR	Q86YZ3	2850 aa	Predicted RBP	12.02	□□□□□ -0.49
NR1H3-231	ENST00000529540	DYSF	O75923	2080 aa		12.02	□□□□□ -0.49
NR1H3-231	ENST00000529540		A0A087X0M5	115 aa		12.02	□□□□□ -0.49
NR1H3-231	ENST00000529540		A0A1B0GX30	115 aa		12.02	□□□□□ -0.49
NR1H3-231	ENST00000529540	CEBPZOS	A8MTT3	80 aa		12.02	□□□□□ -0.49
NR1H3-231	ENST00000529540	C3orf80	F5H4A9	247 aa		12.02	□□□□□ -0.49
NR1H3-231	ENST00000529540	TMEM250	H0YL14	139 aa		12.02	□□□□□ -0.49
NR1H3-231	ENST00000529540	SLC31A2	O15432	143 aa		12.02	□□□□□ -0.49
NR1H3-231	ENST00000529540	KBTBD11	O94819	623 aa		12.02	□□□□□ -0.49
NR1H3-231	ENST00000529540	PRDX2	P32119	198 aa		12.02	□□□□□ -0.49
NR1H3-231	ENST00000529540	NCR3LG1	Q68D85	454 aa		12.02	□□□□□ -0.49
NR1H3-231	ENST00000529540	STUM	Q69YW2	141 aa		12.02	□□□□□ -0.49
NR1H3-231	ENST00000529540	CLEC2A	Q6UVW9	174 aa		12.02	□□□□□ -0.49
NR1H3-231	ENST00000529540	OR1P1	Q8NH06	330 aa		12.02	□□□□□ -0.49
NR1H3-231	ENST00000529540	SNX22	Q96L94	193 aa		12.02	□□□□□ -0.49
NR1H3-231	ENST00000529540	NOL4L	Q96MY1	436 aa	Predicted RBP	12.02	□□□□□ -0.49
NR1H3-231	ENST00000529540	C2orf88	Q9BSF0	95 aa		12.02	□□□□□ -0.49
NR1H3-231	ENST00000529540	ACTR3C	Q9C0K3	210 aa	Predicted RBP	12.02	□□□□□ -0.49
NR1H3-231	ENST00000529540	FAM234A	Q9H0X4	552 aa		12.02	□□□□□ -0.49
NR1H3-231	ENST00000529540	OR2H2	O95918	312 aa		12.01	□□□□□ -0.49
NR1H3-231	ENST00000529540	IGKV1-5	P01602	117 aa		12.01	□□□□□ -0.49
NR1H3-231	ENST00000529540	GPR6	P46095	362 aa	Predicted RBP	12.01	□□□□□ -0.49
NR1H3-231	ENST00000529540	TAS2R60	P59551	318 aa		12.01	□□□□□ -0.49
NR1H3-231	ENST00000529540	TMEM241	Q24JQ0	296 aa		12.01	□□□□□ -0.49
NR1H3-231	ENST00000529540	DEFB113	Q30KQ7	82 aa		12.01	□□□□□ -0.49
NR1H3-231	ENST00000529540	C16orf82	Q7Z2V1	217 aa		12.01	□□□□□ -0.49
NR1H3-231	ENST00000529540	OR51H1	Q8NH63	302 aa		12.01	□□□□□ -0.49
NR1H3-231	ENST00000529540	RAB24	Q969Q5	203 aa		12.01	□□□□□ -0.49
NR1H3-231	ENST00000529540	SDSL	Q96GA7	329 aa		12.01	□□□□□ -0.49
NR1H3-231	ENST00000529540	ACY3	Q96HD9	319 aa		12.01	□□□□□ -0.49
NR1H3-231	ENST00000529540	LIN7C	Q9NUP9	197 aa	Known RBP	12.01	□□□□□ -0.49
NR1H3-231	ENST00000529540	KAAG1	Q9UBP8	84 aa		12.01	□□□□□ -0.49
NR1H3-231	ENST00000529540	CHD3	Q12873	2000 aa	Known RBP	12.01	□□□□□ -0.49
NR1H3-231	ENST00000529540	TRAV24	A0A0B4J272	114 aa		12	□□□□□ -0.49
NR1H3-231	ENST00000529540	ZNF737	O75373	536 aa		12	□□□□□ -0.49
NR1H3-231	ENST00000529540	AMBP	P02760	352 aa		12	□□□□□ -0.49
NR1H3-231	ENST00000529540	METTL15P1	P0C7V9	234 aa		12	□□□□□ -0.49
NR1H3-231	ENST00000529540	IAPP	P10997	89 aa		12	□□□□□ -0.49
NR1H3-231	ENST00000529540	GABRA2	P47869	451 aa		12	□□□□□ -0.49
NR1H3-231	ENST00000529540	FGF8	P55075	233 aa	Predicted RBP	12	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms