RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 LRTM2Q8N967 370 aa11.38□□□□□ -0.59
UBXN1-209ENST00000528907 SEC22AQ96IW7 307 aa11.38□□□□□ -0.59
UBXN1-209ENST00000528907 WNT10AQ9GZT5 417 aa11.38□□□□□ -0.59
UBXN1-209ENST00000528907 C20orf85Q9H1P6 137 aa11.38□□□□□ -0.59
UBXN1-209ENST00000528907 NUBP2Q9Y5Y2 271 aa11.38□□□□□ -0.59
UBXN1-209ENST00000528907 ARPC1BO15143 372 aaKnown RBP11.37□□□□□ -0.59
UBXN1-209ENST00000528907 SFT2D2O95562 160 aa11.37□□□□□ -0.59
UBXN1-209ENST00000528907 P0C879 139 aa11.37□□□□□ -0.59
UBXN1-209ENST00000528907 PROK1P58294 105 aa11.37□□□□□ -0.59
UBXN1-209ENST00000528907 ERVK-16P61578 105 aa11.37□□□□□ -0.59
UBXN1-209ENST00000528907 CX3CL1P78423 397 aa11.37□□□□□ -0.59
UBXN1-209ENST00000528907 SSBP2P81877 361 aaPredicted RBP11.37□□□□□ -0.59
UBXN1-209ENST00000528907 PLGLAQ15195 96 aa11.37□□□□□ -0.59
UBXN1-209ENST00000528907 SP6Q3SY56 376 aa11.37□□□□□ -0.59
UBXN1-209ENST00000528907 SLC35E3Q7Z769 313 aa11.37□□□□□ -0.59
UBXN1-209ENST00000528907 ENKURQ8TC29 256 aa11.37□□□□□ -0.59
UBXN1-209ENST00000528907 WIPF2Q8TF74 440 aaPredicted RBP11.37□□□□□ -0.59
UBXN1-209ENST00000528907 HSPB9Q9BQS6 159 aa11.37□□□□□ -0.59
UBXN1-209ENST00000528907 OR51J1Q9H342 316 aa11.37□□□□□ -0.59
UBXN1-209ENST00000528907 TPSG1Q9NRR2 321 aa11.37□□□□□ -0.59
UBXN1-209ENST00000528907 TMEM140Q9NV12 185 aa11.37□□□□□ -0.59
UBXN1-209ENST00000528907 FLVCR2Q9UPI3 526 aa11.37□□□□□ -0.59
UBXN1-209ENST00000528907 DUXBA0A1W2PPF3 345 aa11.36□□□□□ -0.59
UBXN1-209ENST00000528907 SH2D7A6NKC9 451 aaPredicted RBP11.36□□□□□ -0.59
UBXN1-209ENST00000528907 HAX1O00165 279 aa11.36□□□□□ -0.59
UBXN1-209ENST00000528907 AP4M1O00189 453 aa11.36□□□□□ -0.59
UBXN1-209ENST00000528907 UPK2O00526 184 aa11.36□□□□□ -0.59
UBXN1-209ENST00000528907 FCN1O00602 326 aa11.36□□□□□ -0.59
UBXN1-209ENST00000528907 CA2P00918 260 aa11.36□□□□□ -0.59
UBXN1-209ENST00000528907 OR4E1P0C645 316 aa11.36□□□□□ -0.59
UBXN1-209ENST00000528907 VDAC2P45880 294 aaPredicted RBP11.36□□□□□ -0.59
UBXN1-209ENST00000528907 PPP1R1AQ13522 171 aa11.36□□□□□ -0.59
UBXN1-209ENST00000528907 DCTN2Q13561 401 aaKnown RBP11.36□□□□□ -0.59
UBXN1-209ENST00000528907 NRARPQ7Z6K4 114 aa11.36□□□□□ -0.59
UBXN1-209ENST00000528907 FAM219AQ8IW50 185 aa11.36□□□□□ -0.59
UBXN1-209ENST00000528907 FOXRED2Q8IWF2 684 aa11.36□□□□□ -0.59
UBXN1-209ENST00000528907 SELENOHQ8IZQ5 122 aaKnown RBP11.36□□□□□ -0.59
UBXN1-209ENST00000528907 VKORC1L1Q8N0U8 176 aa11.36□□□□□ -0.59
UBXN1-209ENST00000528907 DMBX1Q8NFW5 382 aa11.36□□□□□ -0.59
UBXN1-209ENST00000528907 RBPMSQ93062 196 aaKnown RBP11.36□□□□□ -0.59
UBXN1-209ENST00000528907 ZNF430Q9H8G1 570 aaPredicted RBP11.36□□□□□ -0.59
UBXN1-209ENST00000528907 C9orf170A2RU37 121 aa11.35□□□□□ -0.59
UBXN1-209ENST00000528907 PTTG1O95997 202 aa11.35□□□□□ -0.59
UBXN1-209ENST00000528907 KRASP01116 189 aa11.35□□□□□ -0.59
UBXN1-209ENST00000528907 IGKV1-5P01602 117 aa11.35□□□□□ -0.59
UBXN1-209ENST00000528907 H2AFB2P0C5Z0 115 aa11.35□□□□□ -0.59
UBXN1-209ENST00000528907 MDKP21741 143 aaPredicted RBP11.35□□□□□ -0.59
UBXN1-209ENST00000528907 G6PCP35575 357 aa11.35□□□□□ -0.59
UBXN1-209ENST00000528907 TRIM16LQ309B1 348 aa11.35□□□□□ -0.59
UBXN1-209ENST00000528907 AWAT1Q58HT5 328 aa11.35□□□□□ -0.59
UBXN1-209ENST00000528907 LYG2Q86SG7 212 aa11.35□□□□□ -0.59
UBXN1-209ENST00000528907 LGI3Q8N145 548 aa11.35□□□□□ -0.59
UBXN1-209ENST00000528907 SGMS2Q8NHU3 365 aa11.35□□□□□ -0.59
UBXN1-209ENST00000528907 LHFPL5Q8TAF8 219 aa11.35□□□□□ -0.59
UBXN1-209ENST00000528907 CHPT1Q8WUD6 406 aa11.35□□□□□ -0.59
UBXN1-209ENST00000528907 TAF15Q92804 592 aaKnown RBP eCLIP11.35□□□□□ -0.59
UBXN1-209ENST00000528907 LSM10Q969L4 123 aaKnown RBP11.35□□□□□ -0.59
UBXN1-209ENST00000528907 TMEM68Q96MH6 324 aa11.35□□□□□ -0.59
UBXN1-209ENST00000528907 GON7Q9BXV9 100 aa11.35□□□□□ -0.59
UBXN1-209ENST00000528907 NUDT15Q9NV35 164 aa11.35□□□□□ -0.59
UBXN1-209ENST00000528907 RNF114Q9Y508 228 aa11.35□□□□□ -0.59
UBXN1-209ENST00000528907 A0A0B4J2A0 478 aa11.34□□□□□ -0.59
UBXN1-209ENST00000528907 LINC01548A6NM66 108 aa11.34□□□□□ -0.59
UBXN1-209ENST00000528907 DUS4LO95620 317 aaKnown RBP11.34□□□□□ -0.59
UBXN1-209ENST00000528907 IL5P05113 134 aa11.34□□□□□ -0.59
UBXN1-209ENST00000528907 EGR2P11161 476 aaPredicted RBP11.34□□□□□ -0.59
UBXN1-209ENST00000528907 ANXA7P20073 488 aaKnown RBP11.34□□□□□ -0.59
UBXN1-209ENST00000528907 RPL8P62917 257 aaKnown RBP11.34□□□□□ -0.59
UBXN1-209ENST00000528907 NDPQ00604 133 aa11.34□□□□□ -0.59
UBXN1-209ENST00000528907 PJVKQ0ZLH3 352 aa11.34□□□□□ -0.59
UBXN1-209ENST00000528907 DHRS2Q13268 280 aa11.34□□□□□ -0.59
UBXN1-209ENST00000528907 FXYD3Q14802 87 aa11.34□□□□□ -0.59
UBXN1-209ENST00000528907 AARDQ4LEZ3 155 aa11.34□□□□□ -0.59
UBXN1-209ENST00000528907 C19orf54Q5BKX5 351 aa11.34□□□□□ -0.59
UBXN1-209ENST00000528907 C9orf152Q5JTZ5 239 aa11.34□□□□□ -0.59
UBXN1-209ENST00000528907 SSX9Q7RTT3 188 aa11.34□□□□□ -0.59
UBXN1-209ENST00000528907 H2BFWTQ7Z2G1 175 aa11.34□□□□□ -0.59
UBXN1-209ENST00000528907 ZNF695Q8IW36 515 aa11.34□□□□□ -0.59
UBXN1-209ENST00000528907 STPG2Q8N412 459 aa11.34□□□□□ -0.59
UBXN1-209ENST00000528907 ARPC1AQ92747 370 aa11.34□□□□□ -0.59
UBXN1-209ENST00000528907 MARVELD1Q9BSK0 173 aa11.34□□□□□ -0.59
UBXN1-209ENST00000528907 SHPKQ9UHJ6 478 aa11.34□□□□□ -0.59
UBXN1-209ENST00000528907 TRAV6A0A075B6T7 132 aa11.33□□□□□ -0.6
UBXN1-209ENST00000528907 ATP6V0E1O15342 81 aa11.33□□□□□ -0.6
UBXN1-209ENST00000528907 WIPF1O43516 503 aa11.33□□□□□ -0.6
UBXN1-209ENST00000528907 HLA-AP01891 365 aaKnown RBP11.33□□□□□ -0.6
UBXN1-209ENST00000528907 HLA-GP17693 338 aa11.33□□□□□ -0.6
UBXN1-209ENST00000528907 VDAC1P21796 283 aa11.33□□□□□ -0.6
UBXN1-209ENST00000528907 VAMP1P23763 118 aa11.33□□□□□ -0.6
UBXN1-209ENST00000528907 CFHR3Q02985 330 aa11.33□□□□□ -0.6
UBXN1-209ENST00000528907 AKIRIN2Q53H80 203 aa11.33□□□□□ -0.6
UBXN1-209ENST00000528907 TMEM268Q5VZI3 342 aa11.33□□□□□ -0.6
UBXN1-209ENST00000528907 THOC7Q6I9Y2 204 aaKnown RBP11.33□□□□□ -0.6
UBXN1-209ENST00000528907 PLET1Q6UQ28 207 aa11.33□□□□□ -0.6
UBXN1-209ENST00000528907 ZNF429Q86V71 674 aa11.33□□□□□ -0.6
UBXN1-209ENST00000528907 CLCC1Q96S66 551 aa11.33□□□□□ -0.6
UBXN1-209ENST00000528907 SRSF8Q9BRL6 282 aaKnown RBP11.33□□□□□ -0.6
UBXN1-209ENST00000528907 FKBP11Q9NYL4 201 aa11.33□□□□□ -0.6
UBXN1-209ENST00000528907 PRNDQ9UKY0 176 aa11.33□□□□□ -0.6
UBXN1-209ENST00000528907 ZNF257Q9Y2Q1 563 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms