RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 RAB1CQ92928 201 aa12.08□□□□□ -0.48
ECHDC1-220ENST00000528402 RSG1Q9BU20 258 aa12.08□□□□□ -0.48
ECHDC1-220ENST00000528402 ASPMQ8IZT6 3477 aa12.08□□□□□ -0.48
ECHDC1-220ENST00000528402 DOCK11Q5JSL3 2073 aa12.07□□□□□ -0.48
ECHDC1-220ENST00000528402 UBE2L5PA0A1B0GUS4 154 aa12.07□□□□□ -0.48
ECHDC1-220ENST00000528402 FNDC10F2Z333 226 aa12.07□□□□□ -0.48
ECHDC1-220ENST00000528402 NDUFS6O75380 124 aaKnown RBP12.07□□□□□ -0.48
ECHDC1-220ENST00000528402 FCN3O75636 299 aa12.07□□□□□ -0.48
ECHDC1-220ENST00000528402 HSPB1P04792 205 aaKnown RBP12.07□□□□□ -0.48
ECHDC1-220ENST00000528402 IGHV1-8P0DP01 117 aa12.07□□□□□ -0.48
ECHDC1-220ENST00000528402 HOXA1P49639 335 aaPredicted RBP12.07□□□□□ -0.48
ECHDC1-220ENST00000528402 RAB13P51153 203 aa12.07□□□□□ -0.48
ECHDC1-220ENST00000528402 ZNF506Q5JVG8 444 aa12.07□□□□□ -0.48
ECHDC1-220ENST00000528402 UTF1Q5T230 341 aa12.07□□□□□ -0.48
ECHDC1-220ENST00000528402 ATRAIDQ6UW56 229 aa12.07□□□□□ -0.48
ECHDC1-220ENST00000528402 ETV3LQ6ZN32 361 aa12.07□□□□□ -0.48
ECHDC1-220ENST00000528402 OR5B3Q8NH48 314 aa12.07□□□□□ -0.48
ECHDC1-220ENST00000528402 C8orf46Q8TAG6 207 aa12.07□□□□□ -0.48
ECHDC1-220ENST00000528402 LHX4Q969G2 390 aa12.07□□□□□ -0.48
ECHDC1-220ENST00000528402 NEIL1Q96FI4 390 aaPredicted RBP12.07□□□□□ -0.48
ECHDC1-220ENST00000528402 RPRMQ9NS64 109 aa12.07□□□□□ -0.48
ECHDC1-220ENST00000528402 DNASE2O00115 360 aaPredicted RBP12.06□□□□□ -0.48
ECHDC1-220ENST00000528402 KBTBD11O94819 623 aa12.06□□□□□ -0.48
ECHDC1-220ENST00000528402 IFNA1P01562 189 aa12.06□□□□□ -0.48
ECHDC1-220ENST00000528402 FGF7P21781 194 aa12.06□□□□□ -0.48
ECHDC1-220ENST00000528402 CD1BP29016 333 aa12.06□□□□□ -0.48
ECHDC1-220ENST00000528402 PPT1P50897 306 aa12.06□□□□□ -0.48
ECHDC1-220ENST00000528402 GUCA2BQ16661 112 aa12.06□□□□□ -0.48
ECHDC1-220ENST00000528402 DTX2Q86UW9 622 aa12.06□□□□□ -0.48
ECHDC1-220ENST00000528402 VKORC1L1Q8N0U8 176 aa12.06□□□□□ -0.48
ECHDC1-220ENST00000528402 ABHD12Q8N2K0 398 aa12.06□□□□□ -0.48
ECHDC1-220ENST00000528402 CLRN3Q8NCR9 226 aa12.06□□□□□ -0.48
ECHDC1-220ENST00000528402 OR8B3Q8NGG8 313 aa12.06□□□□□ -0.48
ECHDC1-220ENST00000528402 OR10G4Q8NGN3 311 aa12.06□□□□□ -0.48
ECHDC1-220ENST00000528402 OR4C13Q8NGP0 309 aa12.06□□□□□ -0.48
ECHDC1-220ENST00000528402 ST6GALNAC6Q969X2 333 aa12.06□□□□□ -0.48
ECHDC1-220ENST00000528402 FLYWCH2Q96CP2 140 aaKnown RBP12.06□□□□□ -0.48
ECHDC1-220ENST00000528402 OR8B2Q96RD0 313 aa12.06□□□□□ -0.48
ECHDC1-220ENST00000528402 TMEM133Q9H2Q1 129 aa12.06□□□□□ -0.48
ECHDC1-220ENST00000528402 KCNIP2Q9NS61 270 aa12.06□□□□□ -0.48
ECHDC1-220ENST00000528402 WDR83OSQ9Y284 106 aa12.06□□□□□ -0.48
ECHDC1-220ENST00000528402 TMA7Q9Y2S6 64 aaKnown RBP12.06□□□□□ -0.48
ECHDC1-220ENST00000528402 OR51B2Q9Y5P1 312 aa12.06□□□□□ -0.48
ECHDC1-220ENST00000528402 SPTA1P02549 2419 aa12.06□□□□□ -0.48
ECHDC1-220ENST00000528402 DMXL2Q8TDJ6 3036 aa12.05□□□□□ -0.48
ECHDC1-220ENST00000528402 C9JQL5 133 aa12.05□□□□□ -0.48
ECHDC1-220ENST00000528402 INS-IGF2F8WCM5 200 aa12.05□□□□□ -0.48
ECHDC1-220ENST00000528402 H0YJW9 148 aa12.05□□□□□ -0.48
ECHDC1-220ENST00000528402 H7C2Y5 167 aa12.05□□□□□ -0.48
ECHDC1-220ENST00000528402 CDSNQ15517 529 aa12.05□□□□□ -0.48
ECHDC1-220ENST00000528402 ACOT6Q3I5F7 207 aaPredicted RBP12.05□□□□□ -0.48
ECHDC1-220ENST00000528402 C11orf71Q6IPW1 123 aa12.05□□□□□ -0.48
ECHDC1-220ENST00000528402 RBMS3Q6XE24 437 aaKnown RBP12.05□□□□□ -0.48
ECHDC1-220ENST00000528402 ZNF841Q6ZN19 808 aa12.05□□□□□ -0.48
ECHDC1-220ENST00000528402 SLC39A9Q9NUM3 307 aa12.05□□□□□ -0.48
ECHDC1-220ENST00000528402 RFNGQ9Y644 331 aa12.05□□□□□ -0.48
ECHDC1-220ENST00000528402 ROS1P08922 2347 aa12.05□□□□□ -0.48
ECHDC1-220ENST00000528402 IGF2RP11717 2491 aa12.04□□□□□ -0.48
ECHDC1-220ENST00000528402 TRAV3A0A0B4J244 114 aa12.04□□□□□ -0.48
ECHDC1-220ENST00000528402 CYB5BO43169 146 aa12.04□□□□□ -0.48
ECHDC1-220ENST00000528402 USF1P22415 310 aaPredicted RBP12.04□□□□□ -0.48
ECHDC1-220ENST00000528402 LGALS7P47929 136 aa12.04□□□□□ -0.48
ECHDC1-220ENST00000528402 PRCDQ00LT1 54 aa12.04□□□□□ -0.48
ECHDC1-220ENST00000528402 SOHLH1Q5JUK2 328 aa12.04□□□□□ -0.48
ECHDC1-220ENST00000528402 ZNF787Q6DD87 383 aa12.04□□□□□ -0.48
ECHDC1-220ENST00000528402 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.04□□□□□ -0.48
ECHDC1-220ENST00000528402 CLDND2Q8NHS1 167 aa12.04□□□□□ -0.48
ECHDC1-220ENST00000528402 P2RX4Q99571 388 aa12.04□□□□□ -0.48
ECHDC1-220ENST00000528402 NABP2Q9BQ15 211 aa12.04□□□□□ -0.48
ECHDC1-220ENST00000528402 NPCDR1Q9BY65 106 aa12.04□□□□□ -0.48
ECHDC1-220ENST00000528402 MRPL20Q9BYC9 149 aaKnown RBP12.04□□□□□ -0.48
ECHDC1-220ENST00000528402 ACTR3CQ9C0K3 210 aaPredicted RBP12.04□□□□□ -0.48
ECHDC1-220ENST00000528402 PLEKHA3Q9HB20 300 aa12.04□□□□□ -0.48
ECHDC1-220ENST00000528402 NPVFQ9HCQ7 196 aa12.04□□□□□ -0.48
ECHDC1-220ENST00000528402 WASHC3Q9Y3C0 194 aa12.04□□□□□ -0.48
ECHDC1-220ENST00000528402 BSNQ9UPA5 3926 aa12.04□□□□□ -0.48
ECHDC1-220ENST00000528402 CTXND1A0A1B0GTU2 59 aa12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 IFNA4P05014 189 aa12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 NPY1RP25929 384 aa12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 CCL20P78556 96 aa12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 RAB31Q13636 194 aa12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 TGIF2LXQ8IUE1 241 aa12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 C11orf42Q8N5U0 333 aa12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 BEND2Q8NDZ0 799 aa12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 SLC24A4Q8NFF2 622 aa12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 RCC1LQ96I51 464 aaKnown RBP12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 AMMECR1Q9Y4X0 333 aaPredicted RBP12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 SPTBN4Q9H254 2564 aa12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 PPIAL4CA0A0B4J2A2 164 aa12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 A0A1W2PN81 502 aa12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 PRSS46E5RG02 174 aa12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 TSPAN4O14817 238 aa12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 GOSR1O95249 250 aa12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 PPIAL4GP0DN37 164 aa12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 CHRNA7P36544 502 aa12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 OPRK1P41145 380 aa12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 TMEM249Q2WGJ8 235 aa12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 SPINK9Q5DT21 86 aa12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 WDR25Q64LD2 544 aaPredicted RBP12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 LY6G5BQ8NDX9 201 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms