RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 HRASLSQ9HDD0 168 aa11.95□□□□□ -0.5
CAPN1-213ENST00000527897 RBMXL2O75526 392 aaKnown RBP11.94□□□□□ -0.5
CAPN1-213ENST00000527897 APOA1P02647 267 aa11.94□□□□□ -0.5
CAPN1-213ENST00000527897 RPA2P15927 270 aa11.94□□□□□ -0.5
CAPN1-213ENST00000527897 ELK1P19419 428 aa11.94□□□□□ -0.5
CAPN1-213ENST00000527897 HRH1P35367 487 aa11.94□□□□□ -0.5
CAPN1-213ENST00000527897 TAS2R46P59540 309 aa11.94□□□□□ -0.5
CAPN1-213ENST00000527897 RHOGP84095 191 aa11.94□□□□□ -0.5
CAPN1-213ENST00000527897 DYRK1AQ13627 763 aa11.94□□□□□ -0.5
CAPN1-213ENST00000527897 MSMO1Q15800 293 aa11.94□□□□□ -0.5
CAPN1-213ENST00000527897 C11orf87Q6NUJ2 197 aa11.94□□□□□ -0.5
CAPN1-213ENST00000527897 PUSL1Q8N0Z8 303 aaKnown RBP11.94□□□□□ -0.5
CAPN1-213ENST00000527897 TMEM167AQ8TBQ9 72 aa11.94□□□□□ -0.5
CAPN1-213ENST00000527897 USMG5Q96IX5 58 aa11.94□□□□□ -0.5
CAPN1-213ENST00000527897 B9D2Q9BPU9 175 aa11.94□□□□□ -0.5
CAPN1-213ENST00000527897 ELOVL1Q9BW60 279 aa11.94□□□□□ -0.5
CAPN1-213ENST00000527897 PEF1Q9UBV8 284 aaKnown RBP11.94□□□□□ -0.5
CAPN1-213ENST00000527897 SORL1Q92673 2214 aa11.94□□□□□ -0.5
CAPN1-213ENST00000527897 DNAH9Q9NYC9 4486 aa11.94□□□□□ -0.5
CAPN1-213ENST00000527897 TRBV12-3P01733 135 aa11.93□□□□□ -0.5
CAPN1-213ENST00000527897 RLN1P04808 185 aa11.93□□□□□ -0.5
CAPN1-213ENST00000527897 MYOD1P15172 320 aa11.93□□□□□ -0.5
CAPN1-213ENST00000527897 SPNP16150 400 aa11.93□□□□□ -0.5
CAPN1-213ENST00000527897 TSPAN5P62079 268 aa11.93□□□□□ -0.5
CAPN1-213ENST00000527897 ATP5G2Q06055 141 aa11.93□□□□□ -0.5
CAPN1-213ENST00000527897 OR4A47Q6IF82 309 aa11.93□□□□□ -0.5
CAPN1-213ENST00000527897 MZT2AQ6P582 158 aa11.93□□□□□ -0.5
CAPN1-213ENST00000527897 C19orf35Q6ZS72 473 aa11.93□□□□□ -0.5
CAPN1-213ENST00000527897 SLC25A42Q86VD7 318 aa11.93□□□□□ -0.5
CAPN1-213ENST00000527897 ANKRD13BQ86YJ7 626 aa11.93□□□□□ -0.5
CAPN1-213ENST00000527897 DMBX1Q8NFW5 382 aa11.93□□□□□ -0.5
CAPN1-213ENST00000527897 OR6Q1Q8NGQ2 317 aa11.93□□□□□ -0.5
CAPN1-213ENST00000527897 MRPS26Q9BYN8 205 aaKnown RBP11.93□□□□□ -0.5
CAPN1-213ENST00000527897 AKIP1Q9NQ31 210 aa11.93□□□□□ -0.5
CAPN1-213ENST00000527897 ANAPC10Q9UM13 185 aa11.93□□□□□ -0.5
CAPN1-213ENST00000527897 TEX22C9J3V5 150 aa11.92□□□□□ -0.5
CAPN1-213ENST00000527897 OR2J3O76001 311 aa11.92□□□□□ -0.5
CAPN1-213ENST00000527897 GABARAPO95166 117 aa11.92□□□□□ -0.5
CAPN1-213ENST00000527897 REG1AP05451 166 aa11.92□□□□□ -0.5
CAPN1-213ENST00000527897 IL6RP08887 468 aaPredicted RBP11.92□□□□□ -0.5
CAPN1-213ENST00000527897 GNRHRP30968 328 aa11.92□□□□□ -0.5
CAPN1-213ENST00000527897 SYNJ2BPP57105 145 aa11.92□□□□□ -0.5
CAPN1-213ENST00000527897 RPL8P62917 257 aaKnown RBP11.92□□□□□ -0.5
CAPN1-213ENST00000527897 ZNF45Q02386 682 aa11.92□□□□□ -0.5
CAPN1-213ENST00000527897 EXOSC2Q13868 293 aaKnown RBP11.92□□□□□ -0.5
CAPN1-213ENST00000527897 CTF1Q16619 201 aa11.92□□□□□ -0.5
CAPN1-213ENST00000527897 RPEL1Q2QD12 228 aa11.92□□□□□ -0.5
CAPN1-213ENST00000527897 ZNF343Q6P1L6 599 aa11.92□□□□□ -0.5
CAPN1-213ENST00000527897 GPR141Q7Z602 305 aa11.92□□□□□ -0.5
CAPN1-213ENST00000527897 TTC9CQ8N5M4 171 aa11.92□□□□□ -0.5
CAPN1-213ENST00000527897 OR6F1Q8NGZ6 308 aa11.92□□□□□ -0.5
CAPN1-213ENST00000527897 BORCS5Q969J3 196 aa11.92□□□□□ -0.5
CAPN1-213ENST00000527897 MOB3AQ96BX8 217 aa11.92□□□□□ -0.5
CAPN1-213ENST00000527897 AIFM2Q9BRQ8 373 aa11.92□□□□□ -0.5
CAPN1-213ENST00000527897 ADAM30Q9UKF2 790 aa11.92□□□□□ -0.5
CAPN1-213ENST00000527897 FAM223BA6NKX1 122 aa11.91□□□□□ -0.5
CAPN1-213ENST00000527897 E7EUB6 86 aa11.91□□□□□ -0.5
CAPN1-213ENST00000527897 S1PR2O95136 353 aa11.91□□□□□ -0.5
CAPN1-213ENST00000527897 BRI3O95415 125 aa11.91□□□□□ -0.5
CAPN1-213ENST00000527897 HPRT1P00492 218 aa11.91□□□□□ -0.5
CAPN1-213ENST00000527897 NQO2P16083 231 aa11.91□□□□□ -0.5
CAPN1-213ENST00000527897 HLA-GP17693 338 aa11.91□□□□□ -0.5
CAPN1-213ENST00000527897 NAT1P18440 290 aa11.91□□□□□ -0.5
CAPN1-213ENST00000527897 MAS1LP35410 378 aa11.91□□□□□ -0.5
CAPN1-213ENST00000527897 TAS2R31P59538 309 aa11.91□□□□□ -0.5
CAPN1-213ENST00000527897 DHRS11Q6UWP2 260 aa11.91□□□□□ -0.5
CAPN1-213ENST00000527897 LYSMD2Q8IV50 215 aa11.91□□□□□ -0.5
CAPN1-213ENST00000527897 FAM223AQ8IWN6 122 aa11.91□□□□□ -0.5
CAPN1-213ENST00000527897 GPX8Q8TED1 209 aa11.91□□□□□ -0.5
CAPN1-213ENST00000527897 AP3S1Q92572 193 aa11.91□□□□□ -0.5
CAPN1-213ENST00000527897 CMTM3Q96MX0 182 aa11.91□□□□□ -0.5
CAPN1-213ENST00000527897 ASCL2Q99929 193 aa11.91□□□□□ -0.5
CAPN1-213ENST00000527897 FXYD6Q9H0Q3 95 aa11.91□□□□□ -0.5
CAPN1-213ENST00000527897 LSM4Q9Y4Z0 139 aaKnown RBP11.91□□□□□ -0.5
CAPN1-213ENST00000527897 TRAV3A0A0B4J244 114 aa11.9□□□□□ -0.5
CAPN1-213ENST00000527897 RBFOX2O43251 390 aaKnown RBP eCLIP11.9□□□□□ -0.5
CAPN1-213ENST00000527897 GP9P14770 177 aa11.9□□□□□ -0.5
CAPN1-213ENST00000527897 AREGP15514 252 aa11.9□□□□□ -0.5
CAPN1-213ENST00000527897 ZNF182P17025 639 aaPredicted RBP11.9□□□□□ -0.5
CAPN1-213ENST00000527897 ERVK-16P61578 105 aa11.9□□□□□ -0.5
CAPN1-213ENST00000527897 C15orf32Q32M92 178 aa11.9□□□□□ -0.5
CAPN1-213ENST00000527897 PHLDA2Q53GA4 152 aa11.9□□□□□ -0.5
CAPN1-213ENST00000527897 CMTM1Q8IZ96 169 aa11.9□□□□□ -0.5
CAPN1-213ENST00000527897 NECAP1Q8NC96 275 aa11.9□□□□□ -0.5
CAPN1-213ENST00000527897 OR4A5Q8NH83 315 aa11.9□□□□□ -0.5
CAPN1-213ENST00000527897 SCPEP1Q9HB40 452 aa11.9□□□□□ -0.5
CAPN1-213ENST00000527897 TMEM140Q9NV12 185 aa11.9□□□□□ -0.5
CAPN1-213ENST00000527897 BET1LQ9NYM9 111 aa11.9□□□□□ -0.5
CAPN1-213ENST00000527897 FBXL7Q9UJT9 491 aa11.9□□□□□ -0.5
CAPN1-213ENST00000527897 ZNF257Q9Y2Q1 563 aa11.9□□□□□ -0.5
CAPN1-213ENST00000527897 TRBV9A0A0B4J1U6 114 aa11.89□□□□□ -0.51
CAPN1-213ENST00000527897 A0A1B0GW64 132 aa11.89□□□□□ -0.51
CAPN1-213ENST00000527897 GPR31O00270 319 aa11.89□□□□□ -0.51
CAPN1-213ENST00000527897 PGLYRP1O75594 196 aaPredicted RBP11.89□□□□□ -0.51
CAPN1-213ENST00000527897 IGHV3-23P01764 117 aa11.89□□□□□ -0.51
CAPN1-213ENST00000527897 ZNF735P0CB33 412 aa11.89□□□□□ -0.51
CAPN1-213ENST00000527897 DEFA4P12838 97 aa11.89□□□□□ -0.51
CAPN1-213ENST00000527897 RCVRNP35243 200 aa11.89□□□□□ -0.51
CAPN1-213ENST00000527897 KLF5Q13887 457 aaPredicted RBP11.89□□□□□ -0.51
CAPN1-213ENST00000527897 TATDN3Q17R31 274 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms