RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 SLC5A7Q9GZV3 580 aa7.95□□□□□ -1.14
PRPF40B-204ENST00000527253 ANAPC10Q9UM13 185 aa7.95□□□□□ -1.14
PRPF40B-204ENST00000527253 MRPS7Q9Y2R9 242 aaKnown RBP7.95□□□□□ -1.14
PRPF40B-204ENST00000527253 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.94□□□□□ -1.14
PRPF40B-204ENST00000527253 TRAV3A0A0B4J244 114 aa7.94□□□□□ -1.14
PRPF40B-204ENST00000527253 SULT1C2O00338 296 aa7.94□□□□□ -1.14
PRPF40B-204ENST00000527253 OR2J3O76001 311 aa7.94□□□□□ -1.14
PRPF40B-204ENST00000527253 ACTL6BO94805 426 aa7.94□□□□□ -1.14
PRPF40B-204ENST00000527253 NDUFB8O95169 186 aa7.94□□□□□ -1.14
PRPF40B-204ENST00000527253 ZNF735P0CB33 412 aa7.94□□□□□ -1.14
PRPF40B-204ENST00000527253 AREGP15514 252 aa7.94□□□□□ -1.14
PRPF40B-204ENST00000527253 RPL27AP46776 148 aaKnown RBP7.94□□□□□ -1.14
PRPF40B-204ENST00000527253 MECP2P51608 486 aaKnown RBP7.94□□□□□ -1.14
PRPF40B-204ENST00000527253 TAS2R20P59543 309 aa7.94□□□□□ -1.14
PRPF40B-204ENST00000527253 FXYD4P59646 89 aa7.94□□□□□ -1.14
PRPF40B-204ENST00000527253 ATP5G2Q06055 141 aa7.94□□□□□ -1.14
PRPF40B-204ENST00000527253 EXOSC2Q13868 293 aaKnown RBP7.94□□□□□ -1.14
PRPF40B-204ENST00000527253 TIMM50Q3ZCQ8 353 aa7.94□□□□□ -1.14
PRPF40B-204ENST00000527253 UBE2NLQ5JXB2 153 aa7.94□□□□□ -1.14
PRPF40B-204ENST00000527253 LYSMD2Q8IV50 215 aa7.94□□□□□ -1.14
PRPF40B-204ENST00000527253 SAMD12Q8N8I0 201 aa7.94□□□□□ -1.14
PRPF40B-204ENST00000527253 S100A16Q96FQ6 103 aaKnown RBP7.94□□□□□ -1.14
PRPF40B-204ENST00000527253 FANCD2OSQ96PS1 177 aa7.94□□□□□ -1.14
PRPF40B-204ENST00000527253 FYTTD1Q96QD9 318 aaKnown RBP7.94□□□□□ -1.14
PRPF40B-204ENST00000527253 IZUMO1RA6ND01 250 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 FAM223BA6NKX1 122 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 NPIPB5A8MRT5 1133 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 PPP5D1E7EU14 171 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 CREBL2O60519 120 aaPredicted RBP7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 TNFAIP8O95379 198 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 PMP2P02689 132 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 EIF4EP06730 217 aaKnown RBP7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 CRYGCP07315 174 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 NAT1P18440 290 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 EDN2P20800 178 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 GNRHRP30968 328 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 CBX5P45973 191 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 RFX2P48378 723 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 NCS1P62166 190 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 KLK9Q2XQG4 91 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 OR4A47Q6IF82 309 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 DHRS11Q6UWP2 260 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 ANKRD13BQ86YJ7 626 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 CROCCP3Q8IVE0 287 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 FAM223AQ8IWN6 122 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 SPAG16Q8N0X2 631 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 NECAP1Q8NC96 275 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 ZBTB34Q8NCN2 500 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 VSTM2AQ8TAG5 236 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 SLC25A46Q96AG3 418 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 THAP7Q9BT49 309 aaPredicted RBP7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 FUNDC2Q9BWH2 189 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 SLC2A9Q9NRM0 540 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 C19orf73Q9NVV2 129 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 FBXL7Q9UJT9 491 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 KLK9Q9UKQ9 250 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 RYR3Q15413 4870 aa7.93□□□□□ -1.14
PRPF40B-204ENST00000527253 UPK2O00526 184 aa7.92□□□□□ -1.14
PRPF40B-204ENST00000527253 RBFOX2O43251 390 aaKnown RBP eCLIP7.92□□□□□ -1.14
PRPF40B-204ENST00000527253 HRASP01112 189 aa7.92□□□□□ -1.14
PRPF40B-204ENST00000527253 IGHV3-23P01764 117 aa7.92□□□□□ -1.14
PRPF40B-204ENST00000527253 HLA-AP01891 365 aaKnown RBP7.92□□□□□ -1.14
PRPF40B-204ENST00000527253 IGHV4-30-4P0DP06 118 aa7.92□□□□□ -1.14
PRPF40B-204ENST00000527253 CTRB1P17538 263 aa7.92□□□□□ -1.14
PRPF40B-204ENST00000527253 HLA-GP17693 338 aa7.92□□□□□ -1.14
PRPF40B-204ENST00000527253 PSMB6P28072 239 aa7.92□□□□□ -1.14
PRPF40B-204ENST00000527253 MAS1LP35410 378 aa7.92□□□□□ -1.14
PRPF40B-204ENST00000527253 KIR2DS2P43631 304 aa7.92□□□□□ -1.14
PRPF40B-204ENST00000527253 OR2B8PP59922 312 aa7.92□□□□□ -1.14
PRPF40B-204ENST00000527253 VBP1P61758 197 aa7.92□□□□□ -1.14
PRPF40B-204ENST00000527253 RPL8P62917 257 aaKnown RBP7.92□□□□□ -1.14
PRPF40B-204ENST00000527253 RPEL1Q2QD12 228 aa7.92□□□□□ -1.14
PRPF40B-204ENST00000527253 C15orf32Q32M92 178 aa7.92□□□□□ -1.14
PRPF40B-204ENST00000527253 TMEM69Q5SWH9 247 aa7.92□□□□□ -1.14
PRPF40B-204ENST00000527253 CTRB2Q6GPI1 263 aa7.92□□□□□ -1.14
PRPF40B-204ENST00000527253 TMEM17Q86X19 198 aa7.92□□□□□ -1.14
PRPF40B-204ENST00000527253 OR51H1Q8NH63 302 aa7.92□□□□□ -1.14
PRPF40B-204ENST00000527253 ZNF2Q9BSG1 426 aaPredicted RBP7.92□□□□□ -1.14
PRPF40B-204ENST00000527253 BET1LQ9NYM9 111 aa7.92□□□□□ -1.14
PRPF40B-204ENST00000527253 SIGLEC8Q9NYZ4 499 aa7.92□□□□□ -1.14
PRPF40B-204ENST00000527253 EHFQ9NZC4 300 aa7.92□□□□□ -1.14
PRPF40B-204ENST00000527253 ZNF257Q9Y2Q1 563 aa7.92□□□□□ -1.14
PRPF40B-204ENST00000527253 S4R3C0 116 aa7.92□□□□□ -1.14
PRPF40B-204ENST00000527253 PGLYRP1O75594 196 aaPredicted RBP7.91□□□□□ -1.14
PRPF40B-204ENST00000527253 S1PR2O95136 353 aa7.91□□□□□ -1.14
PRPF40B-204ENST00000527253 HPRT1P00492 218 aa7.91□□□□□ -1.14
PRPF40B-204ENST00000527253 REG1AP05451 166 aa7.91□□□□□ -1.14
PRPF40B-204ENST00000527253 SMIM18P0DKX4 95 aa7.91□□□□□ -1.14
PRPF40B-204ENST00000527253 RPA2P15927 270 aa7.91□□□□□ -1.14
PRPF40B-204ENST00000527253 POU2AF1Q16633 256 aa7.91□□□□□ -1.14
PRPF40B-204ENST00000527253 SLC25A42Q86VD7 318 aa7.91□□□□□ -1.14
PRPF40B-204ENST00000527253 OR4A5Q8NH83 315 aa7.91□□□□□ -1.14
PRPF40B-204ENST00000527253 MOB3AQ96BX8 217 aa7.91□□□□□ -1.14
PRPF40B-204ENST00000527253 CCDC140Q96MF4 163 aa7.91□□□□□ -1.14
PRPF40B-204ENST00000527253 RCHY1Q96PM5 261 aa7.91□□□□□ -1.14
PRPF40B-204ENST00000527253 NAA50Q9GZZ1 169 aaKnown RBP7.91□□□□□ -1.14
PRPF40B-204ENST00000527253 FXYD6Q9H0Q3 95 aa7.91□□□□□ -1.14
PRPF40B-204ENST00000527253 IFT46Q9NQC8 304 aa7.91□□□□□ -1.14
PRPF40B-204ENST00000527253 COMMD3Q9UBI1 195 aa7.91□□□□□ -1.14
PRPF40B-204ENST00000527253 IGLV11-55A0A075B6I3 123 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms