RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 FOXRED2Q8IWF2 684 aa13.08□□□□□ -0.32
SMCO4-204ENST00000527149 CADM3Q8N126 398 aa13.08□□□□□ -0.32
SMCO4-204ENST00000527149 SCGB3A2Q96PL1 93 aa13.08□□□□□ -0.32
SMCO4-204ENST00000527149 PARP11Q9NR21 331 aa13.08□□□□□ -0.32
SMCO4-204ENST00000527149 TET2Q6N021 2002 aaPredicted RBP13.07□□□□□ -0.32
SMCO4-204ENST00000527149 MARCH11A6NNE9 402 aa13.07□□□□□ -0.32
SMCO4-204ENST00000527149 OR2A4O95047 310 aa13.07□□□□□ -0.32
SMCO4-204ENST00000527149 OR5AC1P0C628 307 aa13.07□□□□□ -0.32
SMCO4-204ENST00000527149 P0C879 139 aa13.07□□□□□ -0.32
SMCO4-204ENST00000527149 TCTEX1D4Q5JR98 221 aa13.07□□□□□ -0.32
SMCO4-204ENST00000527149 C10orf55Q5SWW7 151 aa13.07□□□□□ -0.32
SMCO4-204ENST00000527149 VSTM2AQ8TAG5 236 aa13.07□□□□□ -0.32
SMCO4-204ENST00000527149 GLYATL2Q8WU03 294 aa13.07□□□□□ -0.32
SMCO4-204ENST00000527149 ARPC1AQ92747 370 aa13.07□□□□□ -0.32
SMCO4-204ENST00000527149 SEC22AQ96IW7 307 aa13.07□□□□□ -0.32
SMCO4-204ENST00000527149 OR2A7Q96R45 310 aa13.07□□□□□ -0.32
SMCO4-204ENST00000527149 TMEM140Q9NV12 185 aa13.07□□□□□ -0.32
SMCO4-204ENST00000527149 TRAV3A0A0B4J244 114 aa13.06□□□□□ -0.32
SMCO4-204ENST00000527149 G3V318 75 aa13.06□□□□□ -0.32
SMCO4-204ENST00000527149 B3GALNT1O75752 331 aa13.06□□□□□ -0.32
SMCO4-204ENST00000527149 ASAH1Q13510 395 aa13.06□□□□□ -0.32
SMCO4-204ENST00000527149 FXYD3Q14802 87 aa13.06□□□□□ -0.32
SMCO4-204ENST00000527149 SP6Q3SY56 376 aa13.06□□□□□ -0.32
SMCO4-204ENST00000527149 HIST2H2BDQ6DRA6 164 aa13.06□□□□□ -0.32
SMCO4-204ENST00000527149 ZNF329Q86UD4 541 aa13.06□□□□□ -0.32
SMCO4-204ENST00000527149 MMD2Q8IY49 270 aa13.06□□□□□ -0.32
SMCO4-204ENST00000527149 C3orf56Q8N813 242 aa13.06□□□□□ -0.32
SMCO4-204ENST00000527149 LHFPL5Q8TAF8 219 aa13.06□□□□□ -0.32
SMCO4-204ENST00000527149 CHPT1Q8WUD6 406 aa13.06□□□□□ -0.32
SMCO4-204ENST00000527149 GALNT14Q96FL9 552 aa13.06□□□□□ -0.32
SMCO4-204ENST00000527149 AIFM2Q9BRQ8 373 aa13.06□□□□□ -0.32
SMCO4-204ENST00000527149 FAM103A1Q9BTL3 118 aaKnown RBP13.06□□□□□ -0.32
SMCO4-204ENST00000527149 TMEM222Q9H0R3 208 aa13.06□□□□□ -0.32
SMCO4-204ENST00000527149 A0A1B0GW64 132 aa13.05□□□□□ -0.32
SMCO4-204ENST00000527149 CENPXA8MT69 81 aa13.05□□□□□ -0.32
SMCO4-204ENST00000527149 UPK2O00526 184 aa13.05□□□□□ -0.32
SMCO4-204ENST00000527149 KRASP01116 189 aa13.05□□□□□ -0.32
SMCO4-204ENST00000527149 IGKV1-5P01602 117 aa13.05□□□□□ -0.32
SMCO4-204ENST00000527149 FGF2P09038 288 aa13.05□□□□□ -0.32
SMCO4-204ENST00000527149 RPA2P15927 270 aa13.05□□□□□ -0.32
SMCO4-204ENST00000527149 PPIFP30405 207 aaKnown RBP13.05□□□□□ -0.32
SMCO4-204ENST00000527149 SLC6A1P30531 599 aa13.05□□□□□ -0.32
SMCO4-204ENST00000527149 G6PCP35575 357 aa13.05□□□□□ -0.32
SMCO4-204ENST00000527149 DHODHQ02127 395 aa13.05□□□□□ -0.32
SMCO4-204ENST00000527149 ASPHD1Q5U4P2 390 aa13.05□□□□□ -0.32
SMCO4-204ENST00000527149 OR4A5Q8NH83 315 aa13.05□□□□□ -0.32
SMCO4-204ENST00000527149 SGMS2Q8NHU3 365 aa13.05□□□□□ -0.32
SMCO4-204ENST00000527149 NUBP2Q9Y5Y2 271 aa13.05□□□□□ -0.32
SMCO4-204ENST00000527149 WSB1Q9Y6I7 421 aa13.05□□□□□ -0.32
SMCO4-204ENST00000527149 CMYA5Q8N3K9 4069 aa13.05□□□□□ -0.32
SMCO4-204ENST00000527149 MGAM2Q2M2H8 2515 aa13.04□□□□□ -0.32
SMCO4-204ENST00000527149 TRAV41A0A0B4J266 112 aa13.04□□□□□ -0.32
SMCO4-204ENST00000527149 TEX13DA0A0J9YY54 714 aaPredicted RBP13.04□□□□□ -0.32
SMCO4-204ENST00000527149 PSMB11A5LHX3 300 aa13.04□□□□□ -0.32
SMCO4-204ENST00000527149 SOX15O60248 233 aa13.04□□□□□ -0.32
SMCO4-204ENST00000527149 CREBL2O60519 120 aaPredicted RBP13.04□□□□□ -0.32
SMCO4-204ENST00000527149 CDS2O95674 445 aa13.04□□□□□ -0.32
SMCO4-204ENST00000527149 SERPINE2P07093 398 aa13.04□□□□□ -0.32
SMCO4-204ENST00000527149 OR9G9P0C7N8 305 aa13.04□□□□□ -0.32
SMCO4-204ENST00000527149 CD28P10747 220 aa13.04□□□□□ -0.32
SMCO4-204ENST00000527149 MYOD1P15172 320 aa13.04□□□□□ -0.32
SMCO4-204ENST00000527149 ERVK-16P61578 105 aa13.04□□□□□ -0.32
SMCO4-204ENST00000527149 GNB1P62873 340 aa13.04□□□□□ -0.32
SMCO4-204ENST00000527149 TMEM187Q14656 261 aa13.04□□□□□ -0.32
SMCO4-204ENST00000527149 TMEM128Q5BJH2 165 aa13.04□□□□□ -0.32
SMCO4-204ENST00000527149 SHISA2Q6UWI4 295 aa13.04□□□□□ -0.32
SMCO4-204ENST00000527149 TMED4Q7Z7H5 227 aa13.04□□□□□ -0.32
SMCO4-204ENST00000527149 SLC25A42Q86VD7 318 aa13.04□□□□□ -0.32
SMCO4-204ENST00000527149 RNF152Q8N8N0 203 aa13.04□□□□□ -0.32
SMCO4-204ENST00000527149 MINDY2Q8NBR6 621 aa13.04□□□□□ -0.32
SMCO4-204ENST00000527149 DMBX1Q8NFW5 382 aa13.04□□□□□ -0.32
SMCO4-204ENST00000527149 OR5AU1Q8NGC0 362 aa13.04□□□□□ -0.32
SMCO4-204ENST00000527149 GRPEL2Q8TAA5 225 aa13.04□□□□□ -0.32
SMCO4-204ENST00000527149 SRSF12Q8WXF0 261 aaKnown RBP13.04□□□□□ -0.32
SMCO4-204ENST00000527149 FLVCR2Q9UPI3 526 aa13.04□□□□□ -0.32
SMCO4-204ENST00000527149 A0A0G2JRQ6 117 aa13.03□□□□□ -0.32
SMCO4-204ENST00000527149 CGB1A6NKQ9 187 aa13.03□□□□□ -0.32
SMCO4-204ENST00000527149 ADARB2-AS1A8MUL3 147 aa13.03□□□□□ -0.32
SMCO4-204ENST00000527149 E7EUB6 86 aa13.03□□□□□ -0.32
SMCO4-204ENST00000527149 FBXO24O75426 580 aa13.03□□□□□ -0.32
SMCO4-204ENST00000527149 IGHG4P01861 327 aa13.03□□□□□ -0.32
SMCO4-204ENST00000527149 AKR1C4P17516 323 aa13.03□□□□□ -0.32
SMCO4-204ENST00000527149 RPL8P62917 257 aaKnown RBP13.03□□□□□ -0.32
SMCO4-204ENST00000527149 TNXAQ16473 311 aa13.03□□□□□ -0.32
SMCO4-204ENST00000527149 ECSCRQ19T08 205 aa13.03□□□□□ -0.32
SMCO4-204ENST00000527149 CENPVQ7Z7K6 275 aaPredicted RBP13.03□□□□□ -0.32
SMCO4-204ENST00000527149 SGPP2Q8IWX5 399 aa13.03□□□□□ -0.32
SMCO4-204ENST00000527149 CENPSQ8N2Z9 138 aa13.03□□□□□ -0.32
SMCO4-204ENST00000527149 C11orf44Q8N8P7 122 aa13.03□□□□□ -0.32
SMCO4-204ENST00000527149 TMEM56Q96MV1 263 aa13.03□□□□□ -0.32
SMCO4-204ENST00000527149 PRR13Q9NZ81 148 aa13.03□□□□□ -0.32
SMCO4-204ENST00000527149 TMEM56-RWDD3S4R434 201 aa13.03□□□□□ -0.32
SMCO4-204ENST00000527149 DBX1A6NMT0 343 aa13.02□□□□□ -0.33
SMCO4-204ENST00000527149 TEX22C9J3V5 150 aa13.02□□□□□ -0.33
SMCO4-204ENST00000527149 IGLV1-40P01703 118 aa13.02□□□□□ -0.33
SMCO4-204ENST00000527149 HLA-GP17693 338 aa13.02□□□□□ -0.33
SMCO4-204ENST00000527149 VDAC1P21796 283 aa13.02□□□□□ -0.33
SMCO4-204ENST00000527149 MAS1LP35410 378 aa13.02□□□□□ -0.33
SMCO4-204ENST00000527149 CD83Q01151 205 aa13.02□□□□□ -0.33
SMCO4-204ENST00000527149 PPP1R1AQ13522 171 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms