RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 FOXE3Q13461 319 aa6.9□□□□□ -1.3
CCDC90B-208ENST00000527025 ZNF846Q147U1 533 aa6.9□□□□□ -1.3
CCDC90B-208ENST00000527025 SURF2Q15527 256 aaPredicted RBP6.9□□□□□ -1.3
CCDC90B-208ENST00000527025 DEFB136Q30KP8 78 aa6.9□□□□□ -1.3
CCDC90B-208ENST00000527025 BEAN1Q3B7T3 259 aa6.9□□□□□ -1.3
CCDC90B-208ENST00000527025 OR2B11Q5JQS5 317 aa6.9□□□□□ -1.3
CCDC90B-208ENST00000527025 KHDC1LQ5JSQ8 128 aa6.9□□□□□ -1.3
CCDC90B-208ENST00000527025 KPRPQ5T749 579 aaPredicted RBP6.9□□□□□ -1.3
CCDC90B-208ENST00000527025 ASPHD1Q5U4P2 390 aa6.9□□□□□ -1.3
CCDC90B-208ENST00000527025 TRIQKQ629K1 86 aa6.9□□□□□ -1.3
CCDC90B-208ENST00000527025 TEX38Q6PEX7 206 aa6.9□□□□□ -1.3
CCDC90B-208ENST00000527025 MRPL41Q8IXM3 137 aaKnown RBP6.9□□□□□ -1.3
CCDC90B-208ENST00000527025 SLC38A6Q8IZM9 456 aa6.9□□□□□ -1.3
CCDC90B-208ENST00000527025 LINC00482Q8N8I6 264 aa6.9□□□□□ -1.3
CCDC90B-208ENST00000527025 OR4F17Q8NGA8 305 aa6.9□□□□□ -1.3
CCDC90B-208ENST00000527025 MARCH1Q8TCQ1 289 aa6.9□□□□□ -1.3
CCDC90B-208ENST00000527025 RAX2Q96IS3 184 aa6.9□□□□□ -1.3
CCDC90B-208ENST00000527025 OR4F4Q96R69 305 aa6.9□□□□□ -1.3
CCDC90B-208ENST00000527025 P2RX4Q99571 388 aa6.9□□□□□ -1.3
CCDC90B-208ENST00000527025 PRRT1Q99946 306 aa6.9□□□□□ -1.3
CCDC90B-208ENST00000527025 SLC2A9Q9NRM0 540 aa6.9□□□□□ -1.3
CCDC90B-208ENST00000527025 RBFOX2O43251 390 aaKnown RBP eCLIP6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 PGLYRP1O75594 196 aaPredicted RBP6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 CRYZL1O95825 349 aa6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 RLN1P04808 185 aa6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 CTSDP07339 412 aaPredicted RBP6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 ELANEP08246 267 aa6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 PI3P19957 117 aa6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 FAUP35544 74 aaKnown RBP6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 CRIP2P52943 208 aaPredicted RBP6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 SLC35B1P78383 322 aa6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 TAGLNQ01995 201 aaKnown RBP6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 SCGB2B2Q4G0G5 96 aa6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 PHLDA2Q53GA4 152 aa6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 ZNF57Q68EA5 555 aaPredicted RBP6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 ZNF562Q6V9R5 426 aa6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 IDO2Q6ZQW0 420 aa6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 ZNF695Q8IW36 515 aa6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 VKORC1L1Q8N0U8 176 aa6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 KLHL30-AS1Q8NEE0 82 aa6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 LFNGQ8NES3 379 aa6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 TCTEX1D2Q8WW35 142 aa6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 BORCS5Q969J3 196 aa6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 TMEM230Q96A57 120 aa6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 ZNF486Q96H40 463 aaPredicted RBP6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 RTBDNQ9BSG5 229 aaPredicted RBP6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 C5orf66Q9H5L9 145 aa6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 GNB4Q9HAV0 340 aa6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 ZFP57Q9NU63 452 aa6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 MCUBQ9NWR8 336 aa6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 KIAA1456Q9P272 454 aa6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 TBC1D24Q9ULP9 559 aa6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 GPR132Q9UNW8 380 aa6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 VSIG4Q9Y279 399 aa6.89□□□□□ -1.31
CCDC90B-208ENST00000527025 A0A1B0GW64 132 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 E7EUB6 86 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 RAMP3O60896 148 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 FCGR3BO75015 233 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 RBMXL2O75526 392 aaKnown RBP6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 UPK1BO75841 260 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 SPDEFO95238 335 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 RRASP10301 218 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 PF4V1P10720 104 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 PGAM2P15259 253 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 VDAC1P21796 283 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 F2RP25116 425 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 ECI1P42126 302 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 CDX1P47902 265 aaPredicted RBP6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 LGALS7P47929 136 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 RAB9AP51151 201 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 KRTAP10-11P60412 298 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 FXYD3Q14802 87 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 RTL8BQ17RB0 113 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 ECSCRQ19T08 205 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 ZNF585BQ52M93 769 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 LPCAT3Q6P1A2 487 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 TBC1D26Q86UD7 250 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 PPP1R27Q86WC6 154 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 CMTM1Q8IZ96 169 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 SPAG16Q8N0X2 631 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 COMMD1Q8N668 190 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 ZNF491Q8N8L2 437 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 OR51H1Q8NH63 302 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 HARBI1Q96MB7 349 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 OR5B12Q96R08 314 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 TSNAXQ99598 290 aaKnown RBP6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 C7orf50Q9BRJ6 194 aaKnown RBP6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 ALX4Q9H161 411 aaPredicted RBP6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 SCP2D1Q9UJQ7 156 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 PRELID3BQ9Y3B1 194 aa6.88□□□□□ -1.31
CCDC90B-208ENST00000527025 LINC00854A0A1B0GVQ3 168 aa6.87□□□□□ -1.31
CCDC90B-208ENST00000527025 A0A1W2PN81 502 aa6.87□□□□□ -1.31
CCDC90B-208ENST00000527025 NAP1L6A6NFF2 107 aa6.87□□□□□ -1.31
CCDC90B-208ENST00000527025 I3L521 148 aa6.87□□□□□ -1.31
CCDC90B-208ENST00000527025 SHOXO15266 292 aa6.87□□□□□ -1.31
CCDC90B-208ENST00000527025 S1PR2O95136 353 aa6.87□□□□□ -1.31
CCDC90B-208ENST00000527025 IGKV1-39P01597 117 aa6.87□□□□□ -1.31
CCDC90B-208ENST00000527025 IGKV1D-39P04432 117 aa6.87□□□□□ -1.31
CCDC90B-208ENST00000527025 APELAP0DMC3 54 aa6.87□□□□□ -1.31
CCDC90B-208ENST00000527025 MYOD1P15172 320 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms