RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 HES3Q5TGS1 186 aa2.22□□□□□ -2.05
CD44-223ENST00000526553 SPATA31B1PQ5VZV4 182 aa2.22□□□□□ -2.05
CD44-223ENST00000526553 AMMECR1LQ6DCA0 310 aa2.22□□□□□ -2.05
CD44-223ENST00000526553 TNFAIP8L2Q6P589 184 aaPredicted RBP2.22□□□□□ -2.05
CD44-223ENST00000526553 Q6ZRU5 148 aa2.22□□□□□ -2.05
CD44-223ENST00000526553 OR10D3Q8NH80 312 aa2.22□□□□□ -2.05
CD44-223ENST00000526553 ZNRF2Q8NHG8 242 aa2.22□□□□□ -2.05
CD44-223ENST00000526553 ERMNQ8TAM6 284 aa2.22□□□□□ -2.05
CD44-223ENST00000526553 LZICQ8WZA0 190 aa2.22□□□□□ -2.05
CD44-223ENST00000526553 TMBIM1Q969X1 311 aa2.22□□□□□ -2.05
CD44-223ENST00000526553 MBOAT7Q96N66 472 aa2.22□□□□□ -2.05
CD44-223ENST00000526553 MED18Q9BUE0 208 aa2.22□□□□□ -2.05
CD44-223ENST00000526553 TIPINQ9BVW5 301 aa2.22□□□□□ -2.05
CD44-223ENST00000526553 UBAP1Q9NZ09 502 aa2.22□□□□□ -2.05
CD44-223ENST00000526553 POLR3HQ9Y535 204 aaPredicted RBP2.22□□□□□ -2.05
CD44-223ENST00000526553 PHLDA3Q9Y5J5 127 aa2.22□□□□□ -2.05
CD44-223ENST00000526553 PLXNA4Q9HCM2 1894 aa2.22□□□□□ -2.05
CD44-223ENST00000526553 ACACBO00763 2458 aa2.22□□□□□ -2.05
CD44-223ENST00000526553 VPS13AQ96RL7 3174 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 A6NED7 52 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 H0Y980 276 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 OPN1SWP03999 348 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 OR12D1P0DN82 309 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 GABRA3P34903 492 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 SNAP25P60880 206 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 ACSBG2Q5FVE4 666 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 C10orf91Q5T1B1 145 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 LRRN1Q6UXK5 716 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 DOLPP1Q86YN1 238 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 KRTAP13-1Q8IUC0 172 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 TMEM75Q8N9X5 138 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 ITFG2Q969R8 447 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 HIST1H2BAQ96A08 127 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 OTUB2Q96DC9 234 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 ACY3Q96HD9 319 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 TSSK6Q9BXA6 273 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 GNB1LQ9BYB4 327 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 BATF3Q9NR55 127 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 ASF1BQ9NVP2 202 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 ZNF443Q9Y2A4 671 aaPredicted RBP2.21□□□□□ -2.06
CD44-223ENST00000526553 LINC00588Q9Y4M8 146 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 EPG5Q9HCE0 2579 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 GVINP1Q7Z2Y8 2422 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 CEP250Q9BV73 2442 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 COL5A1P20908 1838 aaPredicted RBP2.21□□□□□ -2.06
CD44-223ENST00000526553 NID2Q14112 1375 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 ROBO3Q96MS0 1386 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 MYO15AQ9UKN7 3530 aa2.21□□□□□ -2.06
CD44-223ENST00000526553 FANCMQ8IYD8 2048 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 ZNF532Q9HCE3 1301 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 SDK1Q7Z5N4 2213 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 VGLL3A8MV65 326 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 K7EQS6 105 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 EEF1E1O43324 174 aaKnown RBP2.2□□□□□ -2.06
CD44-223ENST00000526553 STK16O75716 305 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 NQO1P15559 274 aaKnown RBP2.2□□□□□ -2.06
CD44-223ENST00000526553 CTLA4P16410 223 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 DDTP30046 118 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 OR1E2P47887 323 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 BLVRAP53004 296 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 AP2S1P53680 142 aaPredicted RBP2.2□□□□□ -2.06
CD44-223ENST00000526553 RWDD2BP57060 319 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 DHRS2Q13268 280 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 IHHQ14623 411 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 RGS21Q2M5E4 152 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 LCN8Q6JVE9 175 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 YIPF7Q8N8F6 280 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 OR11G2Q8NGC1 345 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 PPP1R14BQ96C90 147 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 ABHD14BQ96IU4 210 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 MED28Q9H204 178 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 BABAM2Q9NXR7 383 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 OR5V1Q9UGF6 321 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 SLC23A2Q9UGH3 650 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 WASHC3Q9Y3C0 194 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 Q9Y3F1 56 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 R4GN34 69 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 U3KQK5 164 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 DCHS1Q96JQ0 3298 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 DMDP11532 3685 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 BAZ2BQ9UIF8 2168 aaKnown RBP2.2□□□□□ -2.06
CD44-223ENST00000526553 NCOR2Q9Y618 2525 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 DMXL1Q9Y485 3027 aa2.2□□□□□ -2.06
CD44-223ENST00000526553 CNOT1A5YKK6 2376 aaKnown RBP2.2□□□□□ -2.06
CD44-223ENST00000526553 MYH9P35579 1960 aaKnown RBP2.19□□□□□ -2.06
CD44-223ENST00000526553 FAM208BQ5VWN6 2430 aa2.19□□□□□ -2.06
CD44-223ENST00000526553 TRAV8-1A0A0A6YYK1 113 aa2.19□□□□□ -2.06
CD44-223ENST00000526553 GGTLC3B5MD39 225 aa2.19□□□□□ -2.06
CD44-223ENST00000526553 LOC730098B7Z3J9 87 aa2.19□□□□□ -2.06
CD44-223ENST00000526553 CXCR6O00574 342 aa2.19□□□□□ -2.06
CD44-223ENST00000526553 PSCAO43653 123 aa2.19□□□□□ -2.06
CD44-223ENST00000526553 SYNGR2O43760 224 aa2.19□□□□□ -2.06
CD44-223ENST00000526553 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
CD44-223ENST00000526553 IGLV3-27P01718 113 aa2.19□□□□□ -2.06
CD44-223ENST00000526553 IGHMP01871 453 aa2.19□□□□□ -2.06
CD44-223ENST00000526553 TYMSP04818 313 aa2.19□□□□□ -2.06
CD44-223ENST00000526553 ISG15P05161 165 aa2.19□□□□□ -2.06
CD44-223ENST00000526553 ATP5G1P05496 136 aa2.19□□□□□ -2.06
CD44-223ENST00000526553 OR13C7P0DN81 318 aa2.19□□□□□ -2.06
CD44-223ENST00000526553 MYL12AP19105 171 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms