RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 KIR2DS1Q14954 304 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 ZNF79Q15937 498 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 TMEM249Q2WGJ8 235 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 CHRFAM7AQ494W8 412 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 FAM53AQ6NSI3 398 aaPredicted RBP3.58□□□□□ -1.84
USP48-211ENST00000526044 FAHD2BQ6P2I3 314 aaPredicted RBP3.58□□□□□ -1.84
USP48-211ENST00000526044 Q6ZS49 121 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 MOB1BQ7L9L4 216 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 ZNF554Q86TJ5 538 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 Q8N402 240 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 COMMD1Q8N668 190 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 GVQW1Q8N7I0 195 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 TMEM229BQ8NBD8 167 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 BEST4Q8NFU0 473 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 OR10A7Q8NGE5 316 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 RFESDQ8TAC1 157 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 MAFIPQ8WZ33 124 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 FAHD2AQ96GK7 314 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 CYYR1Q96J86 154 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 SGK494Q96LW2 274 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 ZNF714Q96N38 554 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 SRRQ9GZT4 340 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 TAF9BQ9HBM6 251 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 ZNF286AQ9HBT8 521 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 LPAR2Q9HBW0 351 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 RAB18Q9NP72 206 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 MMP26Q9NRE1 261 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 TAS2R8Q9NYW2 309 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 PEF1Q9UBV8 284 aaKnown RBP3.58□□□□□ -1.84
USP48-211ENST00000526044 MTFP1Q9UDX5 166 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 ANXA10Q9UJ72 324 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 INSIG2Q9Y5U4 225 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 V9GYH0 126 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 HELZ2Q9BYK8 2649 aaKnown RBP3.58□□□□□ -1.84
USP48-211ENST00000526044 CR1P17927 2039 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 ARHGAP32A7KAX9 2087 aa3.58□□□□□ -1.84
USP48-211ENST00000526044 PRRC2AP48634 2157 aaKnown RBP3.58□□□□□ -1.84
USP48-211ENST00000526044 IGKV1D-8A0A087WSZ0 117 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 C17orf98A8MV24 154 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 ZNF736B4DX44 427 aaPredicted RBP3.57□□□□□ -1.84
USP48-211ENST00000526044 C12orf77C9JDV5 145 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 M0R1W7 72 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 SDCBPO00560 298 aaPredicted RBP3.57□□□□□ -1.84
USP48-211ENST00000526044 FABP7O15540 132 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 YPEL1O60688 119 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 NDUFS6O75380 124 aaKnown RBP3.57□□□□□ -1.84
USP48-211ENST00000526044 HBZP02008 142 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 PMP2P02689 132 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 IFNA6P05013 189 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 STAG3L2P0CL84 134 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 AKAIN1P0CW23 69 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 IGHV4-31P0DP07 118 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 CCL3L1P16619 93 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 OMGP23515 440 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 PRTN3P24158 256 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 ZBTB25P24278 435 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 NFYBP25208 207 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 HLA-DMAP28067 261 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 CEACAM6P40199 344 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 GLP1RP43220 463 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 CDX1P47902 265 aaPredicted RBP3.57□□□□□ -1.84
USP48-211ENST00000526044 BCAP31P51572 246 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 TAS2R46P59540 309 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 TAS2R19P59542 299 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 ARPC4P59998 168 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 ACTBP60709 375 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 TSPAN5P62079 268 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 ACTG1P63261 375 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 PAX2Q02962 417 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 PAX8Q06710 450 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 SLAQ13239 276 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 HMGN3Q15651 99 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 LTC4SQ16873 150 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 C17orf58Q2M2W7 97 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 MORN2Q502X0 79 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 TRIQKQ629K1 86 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 ZNF57Q68EA5 555 aaPredicted RBP3.57□□□□□ -1.84
USP48-211ENST00000526044 OR52W1Q6IF63 320 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 PRR27Q6MZM9 219 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 STEAP1BQ6NZ63 245 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 DHRS11Q6UWP2 260 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 SPNS3Q6ZMD2 512 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 C5orf24Q7Z6I8 188 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 TOMM5Q8N4H5 51 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 C11orf42Q8N5U0 333 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 OR5AP2Q8NGF4 316 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 OR4A4PQ8NGN8 299 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 OR5H2Q8NGV7 314 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 OR6F1Q8NGZ6 308 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 OR1L1Q8NH94 360 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 OR10J5Q8NHC4 309 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 UBALD1Q8TB05 177 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 ZNF596Q8TC21 504 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 SMIM4Q8WVI0 70 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 IL1F10Q8WWZ1 152 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 C18orf12Q96KH6 178 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 YPEL2Q96QA6 119 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 SDHCQ99643 169 aaPredicted RBP3.57□□□□□ -1.84
USP48-211ENST00000526044 CCDC32Q9BV29 185 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 DPAGT1Q9H3H5 408 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms