RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 OR9G4Q8NGQ1 327 aa5□□□□□ -1.61
CD44-221ENST00000526000 FCAMRQ8WWV6 532 aa5□□□□□ -1.61
CD44-221ENST00000526000 EDARADDQ8WWZ3 215 aa5□□□□□ -1.61
CD44-221ENST00000526000 WDR12Q9GZL7 423 aaKnown RBP5□□□□□ -1.61
CD44-221ENST00000526000 HIPK2Q9H2X6 1198 aa5□□□□□ -1.61
CD44-221ENST00000526000 IFT46Q9NQC8 304 aa5□□□□□ -1.61
CD44-221ENST00000526000 COA4Q9NYJ1 87 aa5□□□□□ -1.61
CD44-221ENST00000526000 PIPOXQ9P0Z9 390 aa5□□□□□ -1.61
CD44-221ENST00000526000 MTFP1Q9UDX5 166 aa5□□□□□ -1.61
CD44-221ENST00000526000 ANXA10Q9UJ72 324 aa5□□□□□ -1.61
CD44-221ENST00000526000 MRPS7Q9Y2R9 242 aaKnown RBP5□□□□□ -1.61
CD44-221ENST00000526000 RBMX2Q9Y388 322 aaKnown RBP5□□□□□ -1.61
CD44-221ENST00000526000 WASHC3Q9Y3C0 194 aa5□□□□□ -1.61
CD44-221ENST00000526000 TRBV6-7A0A0A0MS04 114 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 RBMY1BA6NDE4 496 aaKnown RBP4.99□□□□□ -1.61
CD44-221ENST00000526000 RBMY1EA6NEQ0 496 aaKnown RBP4.99□□□□□ -1.61
CD44-221ENST00000526000 A8MZ25 164 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 M0R1X1 148 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 SSX5O60225 188 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 IGKV1-16P04430 117 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 RBMY1DP0C7P1 496 aaKnown RBP4.99□□□□□ -1.61
CD44-221ENST00000526000 ZP3P21754 424 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 MC5RP33032 325 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 CRIP2P52943 208 aaPredicted RBP4.99□□□□□ -1.61
CD44-221ENST00000526000 TAS2R19P59542 299 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 ARPC4P59998 168 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 CD81P60033 236 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 TAGLNQ01995 201 aaKnown RBP4.99□□□□□ -1.61
CD44-221ENST00000526000 PMS2P11Q13670 270 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 MEF2DQ14814 521 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 MSMO1Q15800 293 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 TATDN3Q17R31 274 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 RPEL1Q2QD12 228 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 FAM71F2Q6NXP2 309 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 SNX29P2Q8IUI4 249 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 TCTEX1D1Q8N7M0 179 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 TMEM229BQ8NBD8 167 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 BVESQ8NE79 360 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 OR5AP2Q8NGF4 316 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 OR5AN1Q8NGI8 311 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 NUDCD2Q8WVJ2 157 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 BORCS5Q969J3 196 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 ABHD1Q96SE0 405 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 TSNAXQ99598 290 aaKnown RBP4.99□□□□□ -1.61
CD44-221ENST00000526000 PHB2Q99623 299 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 NEURL2Q9BR09 285 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 CCDC32Q9BV29 185 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 SLA2Q9H6Q3 261 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 SLC35D1Q9NTN3 355 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 PEF1Q9UBV8 284 aaKnown RBP4.99□□□□□ -1.61
CD44-221ENST00000526000 ZNF221Q9UK13 617 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 V9GYH0 126 aa4.99□□□□□ -1.61
CD44-221ENST00000526000 A0A0G2JLM5 398 aa4.98□□□□□ -1.61
CD44-221ENST00000526000 OR5H14A6NHG9 310 aa4.98□□□□□ -1.61
CD44-221ENST00000526000 MSGN1A6NI15 193 aa4.98□□□□□ -1.61
CD44-221ENST00000526000 SRRM4A7MD48 611 aaKnown RBP4.98□□□□□ -1.61
CD44-221ENST00000526000 ZNF785A8K8V0 405 aa4.98□□□□□ -1.61
CD44-221ENST00000526000 IGHV3-23P01764 117 aa4.98□□□□□ -1.61
CD44-221ENST00000526000 HLA-AP01891 365 aaKnown RBP4.98□□□□□ -1.61
CD44-221ENST00000526000 CD74P04233 296 aa4.98□□□□□ -1.61
CD44-221ENST00000526000 FAUP35544 74 aaKnown RBP4.98□□□□□ -1.61
CD44-221ENST00000526000 PPP5CP53041 499 aa4.98□□□□□ -1.61
CD44-221ENST00000526000 SSBP2P81877 361 aaPredicted RBP4.98□□□□□ -1.61
CD44-221ENST00000526000 ZNF846Q147U1 533 aa4.98□□□□□ -1.61
CD44-221ENST00000526000 CDK10Q15131 360 aa4.98□□□□□ -1.61
CD44-221ENST00000526000 CD300EQ496F6 205 aaPredicted RBP4.98□□□□□ -1.61
CD44-221ENST00000526000 PYDC2Q56P42 97 aa4.98□□□□□ -1.61
CD44-221ENST00000526000 TMEM17Q86X19 198 aa4.98□□□□□ -1.61
CD44-221ENST00000526000 Q8N402 240 aa4.98□□□□□ -1.61
CD44-221ENST00000526000 ARRDC1Q8N5I2 433 aa4.98□□□□□ -1.61
CD44-221ENST00000526000 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.98□□□□□ -1.61
CD44-221ENST00000526000 OR5H2Q8NGV7 314 aa4.98□□□□□ -1.61
CD44-221ENST00000526000 OR52I2Q8NH67 350 aa4.98□□□□□ -1.61
CD44-221ENST00000526000 OR10J5Q8NHC4 309 aa4.98□□□□□ -1.61
CD44-221ENST00000526000 DYNLRB2Q8TF09 96 aa4.98□□□□□ -1.61
CD44-221ENST00000526000 GIMAP1Q8WWP7 306 aa4.98□□□□□ -1.61
CD44-221ENST00000526000 C7orf50Q9BRJ6 194 aaKnown RBP4.98□□□□□ -1.61
CD44-221ENST00000526000 GINS4Q9BRT9 223 aa4.98□□□□□ -1.61
CD44-221ENST00000526000 AGMATQ9BSE5 352 aa4.98□□□□□ -1.61
CD44-221ENST00000526000 ST6GALNAC5Q9BVH7 336 aa4.98□□□□□ -1.61
CD44-221ENST00000526000 SRRQ9GZT4 340 aa4.98□□□□□ -1.61
CD44-221ENST00000526000 SRD5A3Q9H8P0 318 aa4.98□□□□□ -1.61
CD44-221ENST00000526000 AKIP1Q9NQ31 210 aa4.98□□□□□ -1.61
CD44-221ENST00000526000 S4R3C0 116 aa4.98□□□□□ -1.61
CD44-221ENST00000526000 NAP1L6A6NFF2 107 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 OR11H12B2RN74 326 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 SHOXO15266 292 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 MPPED1O15442 326 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 TUSC2O75896 110 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 OR2C1O95371 312 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 IGLV2-23P01705 113 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 APOA2P02652 100 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 GSTT2P0CG29 244 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 AKAIN1P0CW23 69 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 LGALS7P47929 136 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 ATP5G2Q06055 141 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 ZNF79Q15937 498 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 TNXAQ16473 311 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 RNASE10Q5GAN6 216 aaKnown RBP4.97□□□□□ -1.61
CD44-221ENST00000526000 TRIQKQ629K1 86 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms