RNA–Protein interactions for RNA: ENST00000525293.5

CD44-216, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-216ENST00000525293 OOSP2Q86WS3 158 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 SGPP2Q8IWX5 399 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 RNF175Q8N4F7 328 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 KRTCAP2Q8N6L1 136 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 C3orf56Q8N813 242 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 SAMD12Q8N8I0 201 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 ZNF615Q8N8J6 731 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 OR4A5Q8NH83 315 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 RAB2BQ8WUD1 216 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 C11orf52Q96A22 123 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 BORCS7Q96B45 105 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 ADAT3Q96EY9 351 aaPredicted RBP1.75□□□□□ -2.13
CD44-216ENST00000525293 SLC25A44Q96H78 314 aaPredicted RBP1.75□□□□□ -2.13
CD44-216ENST00000525293 ACY3Q96HD9 319 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 IGF2BP2-AS1Q96M15 143 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 YPEL4Q96NS1 127 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 CIB3Q96Q77 187 aaPredicted RBP1.75□□□□□ -2.13
CD44-216ENST00000525293 DERL3Q96Q80 235 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 PLEKHF1Q96S99 279 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 S100A13Q99584 98 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 PKMYT1Q99640 499 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 GINS4Q9BRT9 223 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 GGTLC1Q9BX51 225 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 TUBA4BQ9H853 241 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 PDFQ9HBH1 243 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 UBE2TQ9NPD8 197 aaPredicted RBP1.75□□□□□ -2.13
CD44-216ENST00000525293 BET1LQ9NYM9 111 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 COMMD9Q9P000 198 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 MTFP1Q9UDX5 166 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 ZNF629Q9UEG4 869 aaPredicted RBP1.75□□□□□ -2.13
CD44-216ENST00000525293 SHPKQ9UHJ6 478 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 PRO0461Q9UI25 63 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 RIMS3Q9UJD0 308 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 MCTS1Q9ULC4 181 aaKnown RBP1.75□□□□□ -2.13
CD44-216ENST00000525293 ASF1AQ9Y294 204 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 ENPP4Q9Y6X5 453 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 CHD8Q9HCK8 2581 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 MAGI3Q5TCQ9 1506 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 ZNF462Q96JM2 2506 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 NRXN1Q9ULB1 1477 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 ABCC5O15440 1437 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 EIF4G3O43432 1585 aaKnown RBP1.74□□□□□ -2.13
CD44-216ENST00000525293 CCL15-CCL14A0A0B4J2E2 113 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 IGHV3-16A0A0C4DH30 117 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 MUC21A0A0G2JKD1 596 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 A0A0J9YW62 118 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 TEX48A0A1B0GUV7 120 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 A0A1B0GXF2 115 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 F5H5P2 479 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 H3BP45 60 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 J3QT63 122 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 K7EQG2 157 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 M0R233 179 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 TBL1XO60907 577 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 KLF7O75840 302 aaPredicted RBP1.74□□□□□ -2.13
CD44-216ENST00000525293 NDUFC2O95298 119 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 SLC2A10O95528 541 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 HRASP01112 189 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 KRASP01116 189 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 GPX1P07203 203 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 SCTP09683 121 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 SLC35G6P0C7Q6 338 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 ERGP11308 486 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 COX5AP20674 150 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 OR10J1P30954 320 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 PFN2P35080 140 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 MARCKSL1P49006 195 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 SLC35A1P78382 337 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 IQCJQ1A5X6 159 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 CLEC12BQ2HXU8 276 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 C12orf74Q32Q52 190 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 PRR30Q53SZ7 412 aaPredicted RBP1.74□□□□□ -2.13
CD44-216ENST00000525293 TMEM255AQ5JRV8 349 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 TSPO2Q5TGU0 170 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 LYRM7Q5U5X0 104 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 FKBP1CQ5VVH2 108 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 TMEM236Q5W0B7 351 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 LCN12Q6JVE5 192 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 TMEM14EPQ6UXP3 125 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 UNQ9165/PRO28630Q6UXU0 137 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 DGAT2L6Q6ZPD8 337 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 RFLNAQ6ZTI6 216 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 LHFPL1Q86WI0 220 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 ZNF695Q8IW36 515 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 FTMTQ8N4E7 242 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 TTC9CQ8N5M4 171 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 DEFB125Q8N687 156 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 ANKRD29Q8N6D5 301 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 LY6G5BQ8NDX9 201 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 OR5D14Q8NGL3 314 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 OR4C16Q8NGL9 310 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 OR10G6Q8NH81 332 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 C10orf82Q8WW14 230 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 TMEM106AQ96A25 262 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 NABP1Q96AH0 204 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 FXYD5Q96DB9 178 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 SPIN2AQ99865 258 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 SPIN2BQ9BPZ2 258 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 VAMP8Q9BV40 100 aa1.74□□□□□ -2.13
CD44-216ENST00000525293 TMEM147Q9BVK8 224 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms