RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 CASTOR1Q8WTX7 329 aa5.11□□□□□ -1.59
CD44-214ENST00000525211 GPR146Q96CH1 333 aa5.11□□□□□ -1.59
CD44-214ENST00000525211 FLYWCH2Q96CP2 140 aaKnown RBP5.11□□□□□ -1.59
CD44-214ENST00000525211 R3HDM4Q96D70 268 aa5.11□□□□□ -1.59
CD44-214ENST00000525211 SEC22AQ96IW7 307 aa5.11□□□□□ -1.59
CD44-214ENST00000525211 ADTRPQ96IZ2 230 aa5.11□□□□□ -1.59
CD44-214ENST00000525211 HARBI1Q96MB7 349 aa5.11□□□□□ -1.59
CD44-214ENST00000525211 C7orf50Q9BRJ6 194 aaKnown RBP5.11□□□□□ -1.59
CD44-214ENST00000525211 C20orf85Q9H1P6 137 aa5.11□□□□□ -1.59
CD44-214ENST00000525211 AP5S1Q9NUS5 200 aa5.11□□□□□ -1.59
CD44-214ENST00000525211 NUDT15Q9NV35 164 aa5.11□□□□□ -1.59
CD44-214ENST00000525211 METTL1Q9UBP6 276 aaKnown RBP5.11□□□□□ -1.59
CD44-214ENST00000525211 MOB4Q9Y3A3 225 aa5.11□□□□□ -1.59
CD44-214ENST00000525211 A0A0A6YYJ9 748 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 FAM240BA0A1B0GVZ2 78 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 HMX3A6NHT5 357 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 G3V318 75 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 H0Y980 276 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 ATP6V0E1O15342 81 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 ADAP1O75689 374 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 TSPAN9O75954 239 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 SLC22A5O76082 557 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 CA2P00918 260 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 KRASP01116 189 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 OPN1MWP04001 364 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 OR4E1P0C645 316 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 APELAP0DMC3 54 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 OPN1MW2P0DN77 364 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 OPN1MW3P0DN78 364 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 MC5RP33032 325 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 OR2B8PP59922 312 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 UBE2KP61086 200 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 CX3CL1P78423 397 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 DEFA5Q01523 94 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 SURF2Q15527 256 aaPredicted RBP5.1□□□□□ -1.59
CD44-214ENST00000525211 POU2AF1Q16633 256 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 TM4SF20Q53R12 229 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 C19orf54Q5BKX5 351 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 SPINK9Q5DT21 86 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 TCTEX1D4Q5JR98 221 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 C9orf152Q5JTZ5 239 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 OR4A47Q6IF82 309 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 LPCAT3Q6P1A2 487 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 C18orf65Q6ZTR6 163 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 LYZL2Q7Z4W2 148 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 CENPSQ8N2Z9 138 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 DUSP18Q8NEJ0 188 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 OR4C13Q8NGP0 309 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 LINC01006Q8NI28 216 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 WIPF2Q8TF74 440 aaPredicted RBP5.1□□□□□ -1.59
CD44-214ENST00000525211 FAM216AQ8WUB2 273 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 ZNF486Q96H40 463 aaPredicted RBP5.1□□□□□ -1.59
CD44-214ENST00000525211 SLC25A21Q9BQT8 299 aaPredicted RBP5.1□□□□□ -1.59
CD44-214ENST00000525211 C19orf24Q9BVV8 132 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 GHITMQ9H3K2 345 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 ZNF430Q9H8G1 570 aaPredicted RBP5.1□□□□□ -1.59
CD44-214ENST00000525211 TMEM140Q9NV12 185 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 COPZ2Q9P299 210 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 C14orf166Q9Y224 244 aaKnown RBP5.1□□□□□ -1.59
CD44-214ENST00000525211 PRELID3BQ9Y3B1 194 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 WSB1Q9Y6I7 421 aa5.1□□□□□ -1.59
CD44-214ENST00000525211 BTBD17A6NE02 478 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 TEX22C9J3V5 150 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 UPK2O00526 184 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 CCSO14618 274 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 RBFOX2O43251 390 aaKnown RBP eCLIP5.09□□□□□ -1.59
CD44-214ENST00000525211 SOX15O60248 233 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 NXPH3O95157 252 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 CDS2O95674 445 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 HPRT1P00492 218 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 HKR1P10072 659 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 MECP2P51608 486 aaKnown RBP5.09□□□□□ -1.59
CD44-214ENST00000525211 RAG2P55895 527 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 PROK1P58294 105 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 GNB1P62873 340 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 CATR1Q13166 79 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 DHRS2Q13268 280 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 PRSS8Q16651 343 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 RTL8BQ17RB0 113 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 TMEM268Q5VZI3 342 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 DHRS7BQ6IAN0 325 aaPredicted RBP5.09□□□□□ -1.59
CD44-214ENST00000525211 LYG2Q86SG7 212 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 ZNF329Q86UD4 541 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 CMTM1Q8IZ96 169 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 SLC35G3Q8N808 338 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 C11orf44Q8N8P7 122 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 OR10W1Q8NGF6 305 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 OR4S2Q8NH73 311 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 OSR1Q8TAX0 266 aaPredicted RBP5.09□□□□□ -1.59
CD44-214ENST00000525211 TMEM167AQ8TBQ9 72 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 DEDD2Q8WXF8 326 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 GALNT14Q96FL9 552 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 QTRT1Q9BXR0 403 aaKnown RBP5.09□□□□□ -1.59
CD44-214ENST00000525211 TMEM222Q9H0R3 208 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 C16orf95Q9H693 158 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 RANBP3Q9H6Z4 567 aaPredicted RBP5.09□□□□□ -1.59
CD44-214ENST00000525211 PLEKHA2Q9HB19 425 aa5.09□□□□□ -1.59
CD44-214ENST00000525211 TENM1Q9UKZ4 2725 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 TEX50A0A1B0GTY4 177 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 TMEM89A2RUT3 159 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms