RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 LPCAT3Q6P1A2 487 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 UNQ5815/PRO19632Q6UWF5 114 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 FAM219AQ8IW50 185 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 FOXRED2Q8IWF2 684 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 PUSL1Q8N0Z8 303 aaKnown RBP3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 POC5Q8NA72 575 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 ZBTB34Q8NCN2 500 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 OR8H1Q8NGG4 311 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 LHFPL5Q8TAF8 219 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 OSR1Q8TAX0 266 aaPredicted RBP3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 ZFAND1Q8TCF1 268 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 ARPC1AQ92747 370 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 RHOVQ96L33 236 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 FYTTD1Q96QD9 318 aaKnown RBP3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 PHB2Q99623 299 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 PRRT1Q99946 306 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 ZNF747Q9BV97 191 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 HINT2Q9BX68 163 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 WNT10AQ9GZT5 417 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 ALX4Q9H161 411 aaPredicted RBP3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 ZNF355PQ9NSJ1 428 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 TMEM140Q9NV12 185 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 RABL2AQ9UBK7 228 aaPredicted RBP3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 SCP2D1Q9UJQ7 156 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 TBC1D24Q9ULP9 559 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 RABL2BQ9UNT1 228 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 MMP24Q9Y5R2 645 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 S4R3C0 116 aa3.61□□□□□ -1.83
CHMP4A-202ENST00000524955 JMJD1CQ15652 2540 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 TRAV6A0A075B6T7 132 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 CRYM-AS1A6NIL9 109 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 CGB1A6NKQ9 187 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 MARCH11A6NNE9 402 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 NUDT19A8MXV4 375 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 AP4M1O00189 453 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 UPK2O00526 184 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 LYRM1O43325 122 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 RBMXL2O75526 392 aaKnown RBP3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 UPK1BO75841 260 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 KBTBD11O94819 623 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 OR2A4O95047 310 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 SPDEFO95238 335 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 HPRT1P00492 218 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 HRASP01112 189 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 IGKV1-5P01602 117 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 IGHV3-11P01762 117 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 IGHV3-23P01764 117 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 SERPINE2P07093 398 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 IL6RP08887 468 aaPredicted RBP3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 AREGP15514 252 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 NQO2P16083 231 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 SPNP16150 400 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 S100GP29377 79 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 KIR2DS2P43631 304 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 ERVK-16P61578 105 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 RND3P61587 244 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 SUPT4H1P63272 117 aaKnown RBP3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 PPP1R1AQ13522 171 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 MSMO1Q15800 293 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 TMEM268Q5VZI3 342 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 SHISA2Q6UWI4 295 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 ZNF562Q6V9R5 426 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 CCDC71LQ8N9Z2 235 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 TEX45Q8NA69 505 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 OR10W1Q8NGF6 305 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 OR52B4Q8NGK2 314 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 RNASE11Q8TAA1 199 aaKnown RBP3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 FAM110DQ8TAY7 271 aaPredicted RBP3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 TMEM167AQ8TBQ9 72 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 WIPF2Q8TF74 440 aaPredicted RBP3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 GLYATL2Q8WU03 294 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 SRSF12Q8WXF0 261 aaKnown RBP3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 S100ZQ8WXG8 99 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 SEC22AQ96IW7 307 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 OR2A7Q96R45 310 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 RNF5Q99942 180 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 CITED1Q99966 193 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 QTRT1Q9BXR0 403 aaKnown RBP3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 NAA60Q9H7X0 242 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 PLEKHA2Q9HB19 425 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 SLC2A8Q9NY64 477 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 COA4Q9NYJ1 87 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 NUBP2Q9Y5Y2 271 aa3.6□□□□□ -1.83
CHMP4A-202ENST00000524955 IGHV3-21A0A0B4J1V1 117 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 TEX50A0A1B0GTY4 177 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 A0A1B0GUS0 222 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 ANKRD34BA5PLL1 514 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 CENPXA8MT69 81 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 ADARB2-AS1A8MUL3 147 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 TEX22C9J3V5 150 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 H0Y980 276 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 CCSO14618 274 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 RBFOX2O43251 390 aaKnown RBP eCLIP3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 KCNAB3O43448 404 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 ADAP1O75689 374 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 ACTL6BO94805 426 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 NDUFB6O95139 128 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 IGF1P05019 195 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 HOXB5P09067 269 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 HLA-GP17693 338 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms