RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 GLS2Q9UI32 602 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 KPTNQ9Y664 436 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 AUP1Q9Y679 476 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 LINC00312Q9Y6C7 94 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 HERC1Q15751 4861 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 TRGV10A0A0A0MS01 117 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 TRBV6-7A0A0A0MS04 114 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 IGKV1D-13A0A0B4J2D9 117 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 A0A0U1RQK1 487 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 hADV38S2A0JD32 116 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 TMEM30CPA0ZSE6 113 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 METTL21EPA6NDL7 271 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 SERPINE3A8MV23 424 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 A8MV72 311 aaPredicted RBP2.3□□□□□ -2.04
CSDE1-208ENST00000524652 FAM25AB3EWG3 89 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 FAM25CB3EWG5 89 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 FAM25GB3EWG6 89 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 LY6LH3BQJ8 138 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 M0R1W7 72 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 SDCBPO00560 298 aaPredicted RBP2.3□□□□□ -2.04
CSDE1-208ENST00000524652 RGS5O15539 181 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 ORC5O43913 435 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 NOL3O60936 208 aaKnown RBP2.3□□□□□ -2.04
CSDE1-208ENST00000524652 CA11O75493 328 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 DUS4LO95620 317 aaKnown RBP2.3□□□□□ -2.04
CSDE1-208ENST00000524652 ECDO95905 644 aaPredicted RBP2.3□□□□□ -2.04
CSDE1-208ENST00000524652 HBZP02008 142 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 RBP4P02753 201 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 ZNF735P0CB33 412 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 IGKV1-13P0DP09 117 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 PRTN3P24158 256 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 COX7A1P24310 79 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 NFYBP25208 207 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 SAA4P35542 130 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 SOX6P35712 828 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 PPP1CCP36873 323 aaKnown RBP2.3□□□□□ -2.04
CSDE1-208ENST00000524652 ETV6P41212 452 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 GNG10P50151 68 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 IFITM3Q01628 133 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 ARFRP1Q13795 201 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 IL18Q14116 193 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 DEFB112Q30KQ8 113 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 MORN2Q502X0 79 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 CT45A1Q5HYN5 189 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 ZNF660Q6AZW8 331 aaPredicted RBP2.3□□□□□ -2.04
CSDE1-208ENST00000524652 Q6ZS49 121 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 TRAPPC6BQ86SZ2 158 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 HOGA1Q86XE5 327 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 OR11H6Q8NGC7 330 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 OR5AP2Q8NGF4 316 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 CT45A3Q8NHU0 189 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 SETD6Q8TBK2 473 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 ZNF596Q8TC21 504 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 PIFOQ8TCI5 191 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 S100A16Q96FQ6 103 aaKnown RBP2.3□□□□□ -2.04
CSDE1-208ENST00000524652 DIRAS2Q96HU8 199 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 ZNF414Q96IQ9 312 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 ABHD14BQ96IU4 210 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 NEDD4LQ96PU5 975 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 ZNF251Q9BRH9 671 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 AGMATQ9BSE5 352 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 ST6GALNAC5Q9BVH7 336 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 SUCNR1Q9BXA5 334 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 SRRQ9GZT4 340 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 TOLLIPQ9H0E2 274 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 FXYD6Q9H0Q3 95 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 TMEM133Q9H2Q1 129 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 MMP27Q9H306 513 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 METTL8Q9H825 291 aaKnown RBP2.3□□□□□ -2.04
CSDE1-208ENST00000524652 SPACA1Q9HBV2 294 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 ESM1Q9NQ30 184 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 C12orf4Q9NQ89 552 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 BATF3Q9NR55 127 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 TAS2R3Q9NYW6 316 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 NDUFA13Q9P0J0 144 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 TRAPPC2LQ9UL33 140 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 PSG11Q9UQ72 335 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 RBMX2Q9Y388 322 aaKnown RBP2.3□□□□□ -2.04
CSDE1-208ENST00000524652 SESN1Q9Y6P5 492 aa2.3□□□□□ -2.04
CSDE1-208ENST00000524652 HUWE1Q7Z6Z7 4374 aaKnown RBP2.29□□□□□ -2.04
CSDE1-208ENST00000524652 A0A0A6YYH2 397 aa2.29□□□□□ -2.04
CSDE1-208ENST00000524652 IGHV1-69DA0A0B4J2H0 117 aa2.29□□□□□ -2.04
CSDE1-208ENST00000524652 ANKRD20A5PA0PJZ0 165 aa2.29□□□□□ -2.04
CSDE1-208ENST00000524652 FABP12A6NFH5 140 aa2.29□□□□□ -2.04
CSDE1-208ENST00000524652 OR5H14A6NHG9 310 aa2.29□□□□□ -2.04
CSDE1-208ENST00000524652 MSGN1A6NI15 193 aa2.29□□□□□ -2.04
CSDE1-208ENST00000524652 A6NJ64 397 aa2.29□□□□□ -2.04
CSDE1-208ENST00000524652 ZNF736B4DX44 427 aaPredicted RBP2.29□□□□□ -2.04
CSDE1-208ENST00000524652 TRDCB7Z8K6 153 aa2.29□□□□□ -2.04
CSDE1-208ENST00000524652 BUB1B-PAK6H3BSN5 160 aa2.29□□□□□ -2.04
CSDE1-208ENST00000524652 GABARAPH6UMI1 98 aa2.29□□□□□ -2.04
CSDE1-208ENST00000524652 J3QLI3 93 aa2.29□□□□□ -2.04
CSDE1-208ENST00000524652 J3QRK9 145 aa2.29□□□□□ -2.04
CSDE1-208ENST00000524652 NPFFO15130 113 aa2.29□□□□□ -2.04
CSDE1-208ENST00000524652 BET1O15155 118 aa2.29□□□□□ -2.04
CSDE1-208ENST00000524652 CTDSPLO15194 276 aa2.29□□□□□ -2.04
CSDE1-208ENST00000524652 FABP7O15540 132 aa2.29□□□□□ -2.04
CSDE1-208ENST00000524652 GSTZ1O43708 216 aaPredicted RBP2.29□□□□□ -2.04
CSDE1-208ENST00000524652 YPEL1O60688 119 aa2.29□□□□□ -2.04
CSDE1-208ENST00000524652 SCGNO76038 276 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms