RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 CNIH2Q6PI25 160 aa12.28□□□□□ -0.44
HIF3A-208ENST00000524533 C19orf35Q6ZS72 473 aa12.28□□□□□ -0.44
HIF3A-208ENST00000524533 DEFB125Q8N687 156 aa12.28□□□□□ -0.44
HIF3A-208ENST00000524533 TMEM167AQ8TBQ9 72 aa12.28□□□□□ -0.44
HIF3A-208ENST00000524533 OR2A7Q96R45 310 aa12.28□□□□□ -0.44
HIF3A-208ENST00000524533 HSD17B10Q99714 261 aaKnown RBP12.28□□□□□ -0.44
HIF3A-208ENST00000524533 WFDC10AQ9H1F0 79 aa12.28□□□□□ -0.44
HIF3A-208ENST00000524533 SRD5A3Q9H8P0 318 aa12.28□□□□□ -0.44
HIF3A-208ENST00000524533 ZC4H2Q9NQZ6 224 aa12.28□□□□□ -0.44
HIF3A-208ENST00000524533 FBXL7Q9UJT9 491 aa12.28□□□□□ -0.44
HIF3A-208ENST00000524533 NOTOA8MTQ0 251 aa12.27□□□□□ -0.45
HIF3A-208ENST00000524533 SCGNO76038 276 aa12.27□□□□□ -0.45
HIF3A-208ENST00000524533 JTBO76095 146 aa12.27□□□□□ -0.45
HIF3A-208ENST00000524533 FOLR2P14207 255 aa12.27□□□□□ -0.45
HIF3A-208ENST00000524533 MAS1LP35410 378 aa12.27□□□□□ -0.45
HIF3A-208ENST00000524533 GNG2P59768 71 aa12.27□□□□□ -0.45
HIF3A-208ENST00000524533 PUSL1Q8N0Z8 303 aaKnown RBP12.27□□□□□ -0.45
HIF3A-208ENST00000524533 IL17DQ8TAD2 202 aa12.27□□□□□ -0.45
HIF3A-208ENST00000524533 FYTTD1Q96QD9 318 aaKnown RBP12.27□□□□□ -0.45
HIF3A-208ENST00000524533 TECRQ9NZ01 308 aaKnown RBP12.27□□□□□ -0.45
HIF3A-208ENST00000524533 SPATA2Q9UM82 520 aa12.27□□□□□ -0.45
HIF3A-208ENST00000524533 DMRT1Q9Y5R6 373 aa12.27□□□□□ -0.45
HIF3A-208ENST00000524533 RBMY1BA6NDE4 496 aaKnown RBP12.26□□□□□ -0.45
HIF3A-208ENST00000524533 RBMY1EA6NEQ0 496 aaKnown RBP12.26□□□□□ -0.45
HIF3A-208ENST00000524533 OR11H12B2RN74 326 aa12.26□□□□□ -0.45
HIF3A-208ENST00000524533 LGALS9O00182 355 aa12.26□□□□□ -0.45
HIF3A-208ENST00000524533 OR2C1O95371 312 aa12.26□□□□□ -0.45
HIF3A-208ENST00000524533 IGHV3-23P01764 117 aa12.26□□□□□ -0.45
HIF3A-208ENST00000524533 IL6RP08887 468 aaPredicted RBP12.26□□□□□ -0.45
HIF3A-208ENST00000524533 RBMY1DP0C7P1 496 aaKnown RBP12.26□□□□□ -0.45
HIF3A-208ENST00000524533 ARL3P36405 182 aa12.26□□□□□ -0.45
HIF3A-208ENST00000524533 KIR2DS2P43631 304 aa12.26□□□□□ -0.45
HIF3A-208ENST00000524533 GABARAPL2P60520 117 aa12.26□□□□□ -0.45
HIF3A-208ENST00000524533 WDR89Q96FK6 387 aaPredicted RBP12.26□□□□□ -0.45
HIF3A-208ENST00000524533 SLC2A9Q9NRM0 540 aa12.26□□□□□ -0.45
HIF3A-208ENST00000524533 TAS2R8Q9NYW2 309 aa12.26□□□□□ -0.45
HIF3A-208ENST00000524533 ANXA10Q9UJ72 324 aa12.26□□□□□ -0.45
HIF3A-208ENST00000524533 E7EUB6 86 aa12.25□□□□□ -0.45
HIF3A-208ENST00000524533 SSX5O60225 188 aa12.25□□□□□ -0.45
HIF3A-208ENST00000524533 DHFRP00374 187 aa12.25□□□□□ -0.45
HIF3A-208ENST00000524533 ZNF735P0CB33 412 aa12.25□□□□□ -0.45
HIF3A-208ENST00000524533 AREGP15514 252 aa12.25□□□□□ -0.45
HIF3A-208ENST00000524533 EIF4EBP1Q13541 118 aaPredicted RBP12.25□□□□□ -0.45
HIF3A-208ENST00000524533 CLEC19AQ6UXS0 136 aa12.25□□□□□ -0.45
HIF3A-208ENST00000524533 MFSD4AQ8N468 514 aa12.25□□□□□ -0.45
HIF3A-208ENST00000524533 LGALS14Q8TCE9 139 aa12.25□□□□□ -0.45
HIF3A-208ENST00000524533 CACNG8Q8WXS5 425 aa12.25□□□□□ -0.45
HIF3A-208ENST00000524533 EEF1AKMT3Q96AZ1 226 aa12.25□□□□□ -0.45
HIF3A-208ENST00000524533 CCDC140Q96MF4 163 aa12.25□□□□□ -0.45
HIF3A-208ENST00000524533 TXNL4BQ9NX01 149 aaKnown RBP12.25□□□□□ -0.45
HIF3A-208ENST00000524533 DAPK2Q9UIK4 370 aa12.25□□□□□ -0.45
HIF3A-208ENST00000524533 S4R3C0 116 aa12.25□□□□□ -0.45
HIF3A-208ENST00000524533 A0A1B0GW64 132 aa12.24□□□□□ -0.45
HIF3A-208ENST00000524533 NDUFB8O95169 186 aa12.24□□□□□ -0.45
HIF3A-208ENST00000524533 HRASP01112 189 aa12.24□□□□□ -0.45
HIF3A-208ENST00000524533 CRYGCP07315 174 aa12.24□□□□□ -0.45
HIF3A-208ENST00000524533 PSMB9P28065 219 aa12.24□□□□□ -0.45
HIF3A-208ENST00000524533 PSMB6P28072 239 aa12.24□□□□□ -0.45
HIF3A-208ENST00000524533 FGF9P31371 208 aaPredicted RBP12.24□□□□□ -0.45
HIF3A-208ENST00000524533 BRWD1-AS2P59051 145 aa12.24□□□□□ -0.45
HIF3A-208ENST00000524533 ARPC4P59998 168 aa12.24□□□□□ -0.45
HIF3A-208ENST00000524533 RPL8P62917 257 aaKnown RBP12.24□□□□□ -0.45
HIF3A-208ENST00000524533 UBE2UQ5VVX9 321 aa12.24□□□□□ -0.45
HIF3A-208ENST00000524533 ZNF66Q6ZN08 573 aa12.24□□□□□ -0.45
HIF3A-208ENST00000524533 SSX9Q7RTT3 188 aa12.24□□□□□ -0.45
HIF3A-208ENST00000524533 SLC16A13Q7RTY0 426 aa12.24□□□□□ -0.45
HIF3A-208ENST00000524533 TPRA1Q86W33 373 aa12.24□□□□□ -0.45
HIF3A-208ENST00000524533 GPHB5Q86YW7 130 aa12.24□□□□□ -0.45
HIF3A-208ENST00000524533 FANCD2OSQ96PS1 177 aa12.24□□□□□ -0.45
HIF3A-208ENST00000524533 RRP15Q9Y3B9 282 aaKnown RBP12.24□□□□□ -0.45
HIF3A-208ENST00000524533 A8MWP6 167 aa12.23□□□□□ -0.45
HIF3A-208ENST00000524533 MRPS14O60783 128 aaKnown RBP12.23□□□□□ -0.45
HIF3A-208ENST00000524533 HIST1H1BP16401 226 aaKnown RBP12.23□□□□□ -0.45
HIF3A-208ENST00000524533 CTRB1P17538 263 aa12.23□□□□□ -0.45
HIF3A-208ENST00000524533 CBLN1P23435 193 aa12.23□□□□□ -0.45
HIF3A-208ENST00000524533 FAM106AQ4KMX7 169 aa12.23□□□□□ -0.45
HIF3A-208ENST00000524533 CTRB2Q6GPI1 263 aa12.23□□□□□ -0.45
HIF3A-208ENST00000524533 SFXN4Q6P4A7 337 aa12.23□□□□□ -0.45
HIF3A-208ENST00000524533 TMEM61Q8N0U2 210 aa12.23□□□□□ -0.45
HIF3A-208ENST00000524533 SECTM1Q8WVN6 248 aa12.23□□□□□ -0.45
HIF3A-208ENST00000524533 GPHA2Q96T91 129 aa12.23□□□□□ -0.45
HIF3A-208ENST00000524533 RHBDL2Q9NX52 303 aa12.23□□□□□ -0.45
HIF3A-208ENST00000524533 RAB26Q9ULW5 256 aa12.23□□□□□ -0.45
HIF3A-208ENST00000524533 SELENOKQ9Y6D0 94 aa12.23□□□□□ -0.45
HIF3A-208ENST00000524533 BIRC6Q9NR09 4857 aa12.22□□□□□ -0.45
HIF3A-208ENST00000524533 ZNF320A2RRD8 509 aa12.22□□□□□ -0.45
HIF3A-208ENST00000524533 TMEM213A2RRL7 107 aa12.22□□□□□ -0.45
HIF3A-208ENST00000524533 TNFSF12O43508 249 aa12.22□□□□□ -0.45
HIF3A-208ENST00000524533 REG1AP05451 166 aa12.22□□□□□ -0.45
HIF3A-208ENST00000524533 DEFA4P12838 97 aa12.22□□□□□ -0.45
HIF3A-208ENST00000524533 MYOD1P15172 320 aa12.22□□□□□ -0.45
HIF3A-208ENST00000524533 HLA-GP17693 338 aa12.22□□□□□ -0.45
HIF3A-208ENST00000524533 TIMM50Q3ZCQ8 353 aa12.22□□□□□ -0.45
HIF3A-208ENST00000524533 ZNF57Q68EA5 555 aaPredicted RBP12.22□□□□□ -0.45
HIF3A-208ENST00000524533 BEST4Q8NFU0 473 aa12.22□□□□□ -0.45
HIF3A-208ENST00000524533 OR13F1Q8NGS4 319 aa12.22□□□□□ -0.45
HIF3A-208ENST00000524533 CCL28Q9NRJ3 127 aa12.22□□□□□ -0.45
HIF3A-208ENST00000524533 BET1LQ9NYM9 111 aa12.22□□□□□ -0.45
HIF3A-208ENST00000524533 SSR3Q9UNL2 185 aa12.22□□□□□ -0.45
HIF3A-208ENST00000524533 IGLV11-55A0A075B6I3 123 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms