RNA–Protein interactions for RNA: ENST00000524213.5

CSGALNACT1-216, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-216ENST00000524213 RAMP3O60896 148 aa13□□□□□ -0.33
CSGALNACT1-216ENST00000524213 KBTBD11O94819 623 aa13□□□□□ -0.33
CSGALNACT1-216ENST00000524213 EGR2P11161 476 aaPredicted RBP13□□□□□ -0.33
CSGALNACT1-216ENST00000524213 CHRNA7P36544 502 aa13□□□□□ -0.33
CSGALNACT1-216ENST00000524213 ERVK-16P61578 105 aa13□□□□□ -0.33
CSGALNACT1-216ENST00000524213 RPL23AP62750 156 aaKnown RBP13□□□□□ -0.33
CSGALNACT1-216ENST00000524213 POU2AF1Q16633 256 aa13□□□□□ -0.33
CSGALNACT1-216ENST00000524213 IDO2Q6ZQW0 420 aa13□□□□□ -0.33
CSGALNACT1-216ENST00000524213 TBC1D26Q86UD7 250 aa13□□□□□ -0.33
CSGALNACT1-216ENST00000524213 GDPD1Q8N9F7 314 aa13□□□□□ -0.33
CSGALNACT1-216ENST00000524213 MINDY2Q8NBR6 621 aa13□□□□□ -0.33
CSGALNACT1-216ENST00000524213 GRPEL2Q8TAA5 225 aa13□□□□□ -0.33
CSGALNACT1-216ENST00000524213 R3HDM4Q96D70 268 aa13□□□□□ -0.33
CSGALNACT1-216ENST00000524213 SCGB3A2Q96PL1 93 aa13□□□□□ -0.33
CSGALNACT1-216ENST00000524213 SLC2A9Q9NRM0 540 aa13□□□□□ -0.33
CSGALNACT1-216ENST00000524213 SLC2A8Q9NY64 477 aa13□□□□□ -0.33
CSGALNACT1-216ENST00000524213 C14orf166Q9Y224 244 aaKnown RBP13□□□□□ -0.33
CSGALNACT1-216ENST00000524213 FOXA2Q9Y261 457 aaPredicted RBP13□□□□□ -0.33
CSGALNACT1-216ENST00000524213 FBXO7Q9Y3I1 522 aa13□□□□□ -0.33
CSGALNACT1-216ENST00000524213 A0A1W2PRX2 142 aa12.99□□□□□ -0.33
CSGALNACT1-216ENST00000524213 CTSDP07339 412 aaPredicted RBP12.99□□□□□ -0.33
CSGALNACT1-216ENST00000524213 PSMB8P28062 276 aa12.99□□□□□ -0.33
CSGALNACT1-216ENST00000524213 LPAR6P43657 344 aa12.99□□□□□ -0.33
CSGALNACT1-216ENST00000524213 ZNF45Q02386 682 aa12.99□□□□□ -0.33
CSGALNACT1-216ENST00000524213 PJVKQ0ZLH3 352 aa12.99□□□□□ -0.33
CSGALNACT1-216ENST00000524213 C19orf54Q5BKX5 351 aa12.99□□□□□ -0.33
CSGALNACT1-216ENST00000524213 FAAP20Q6NZ36 180 aa12.99□□□□□ -0.33
CSGALNACT1-216ENST00000524213 SSX9Q7RTT3 188 aa12.99□□□□□ -0.33
CSGALNACT1-216ENST00000524213 LFNGQ8NES3 379 aa12.99□□□□□ -0.33
CSGALNACT1-216ENST00000524213 DMBX1Q8NFW5 382 aa12.99□□□□□ -0.33
CSGALNACT1-216ENST00000524213 TRIM63Q969Q1 353 aa12.99□□□□□ -0.33
CSGALNACT1-216ENST00000524213 PHB2Q99623 299 aa12.99□□□□□ -0.33
CSGALNACT1-216ENST00000524213 FAM103A1Q9BTL3 118 aaKnown RBP12.99□□□□□ -0.33
CSGALNACT1-216ENST00000524213 SRRQ9GZT4 340 aa12.99□□□□□ -0.33
CSGALNACT1-216ENST00000524213 ZNF430Q9H8G1 570 aaPredicted RBP12.99□□□□□ -0.33
CSGALNACT1-216ENST00000524213 COPZ2Q9P299 210 aa12.99□□□□□ -0.33
CSGALNACT1-216ENST00000524213 MPPED1O15442 326 aa12.98□□□□□ -0.33
CSGALNACT1-216ENST00000524213 B3GALNT1O75752 331 aa12.98□□□□□ -0.33
CSGALNACT1-216ENST00000524213 S1PR2O95136 353 aa12.98□□□□□ -0.33
CSGALNACT1-216ENST00000524213 IGLV1-40P01703 118 aa12.98□□□□□ -0.33
CSGALNACT1-216ENST00000524213 PF4V1P10720 104 aa12.98□□□□□ -0.33
CSGALNACT1-216ENST00000524213 CDX1P47902 265 aaPredicted RBP12.98□□□□□ -0.33
CSGALNACT1-216ENST00000524213 INPP1P49441 399 aa12.98□□□□□ -0.33
CSGALNACT1-216ENST00000524213 PIGPP57054 158 aa12.98□□□□□ -0.33
CSGALNACT1-216ENST00000524213 KLF9Q13886 244 aaPredicted RBP12.98□□□□□ -0.33
CSGALNACT1-216ENST00000524213 MRGPRG-AS1Q2M3A8 158 aa12.98□□□□□ -0.33
CSGALNACT1-216ENST00000524213 LINC00299Q6ZSB3 139 aa12.98□□□□□ -0.33
CSGALNACT1-216ENST00000524213 VKORC1L1Q8N0U8 176 aa12.98□□□□□ -0.33
CSGALNACT1-216ENST00000524213 CADM3Q8N126 398 aa12.98□□□□□ -0.33
CSGALNACT1-216ENST00000524213 OR51S1Q8NGJ8 323 aa12.98□□□□□ -0.33
CSGALNACT1-216ENST00000524213 OR13C8Q8NGS7 320 aa12.98□□□□□ -0.33
CSGALNACT1-216ENST00000524213 MARCH1Q8TCQ1 289 aa12.98□□□□□ -0.33
CSGALNACT1-216ENST00000524213 SRSF12Q8WXF0 261 aaKnown RBP12.98□□□□□ -0.33
CSGALNACT1-216ENST00000524213 HRASLSQ9HDD0 168 aa12.98□□□□□ -0.33
CSGALNACT1-216ENST00000524213 MCUBQ9NWR8 336 aa12.98□□□□□ -0.33
CSGALNACT1-216ENST00000524213 NUDT19A8MXV4 375 aa12.97□□□□□ -0.33
CSGALNACT1-216ENST00000524213 H3BUA1 57 aa12.97□□□□□ -0.33
CSGALNACT1-216ENST00000524213 RPLP1P05386 114 aaKnown RBP12.97□□□□□ -0.33
CSGALNACT1-216ENST00000524213 FGF2P09038 288 aa12.97□□□□□ -0.33
CSGALNACT1-216ENST00000524213 RPA2P15927 270 aa12.97□□□□□ -0.33
CSGALNACT1-216ENST00000524213 SSBP2P81877 361 aaPredicted RBP12.97□□□□□ -0.33
CSGALNACT1-216ENST00000524213 ZNF585BQ52M93 769 aa12.97□□□□□ -0.33
CSGALNACT1-216ENST00000524213 TRIQKQ629K1 86 aa12.97□□□□□ -0.33
CSGALNACT1-216ENST00000524213 OR4A47Q6IF82 309 aa12.97□□□□□ -0.33
CSGALNACT1-216ENST00000524213 SPIN2AQ99865 258 aa12.97□□□□□ -0.33
CSGALNACT1-216ENST00000524213 SPIN2BQ9BPZ2 258 aa12.97□□□□□ -0.33
CSGALNACT1-216ENST00000524213 GPR132Q9UNW8 380 aa12.97□□□□□ -0.33
CSGALNACT1-216ENST00000524213 MSGN1A6NI15 193 aa12.96□□□□□ -0.33
CSGALNACT1-216ENST00000524213 MARCH11A6NNE9 402 aa12.96□□□□□ -0.33
CSGALNACT1-216ENST00000524213 H0Y980 276 aa12.96□□□□□ -0.33
CSGALNACT1-216ENST00000524213 UPK2O00526 184 aa12.96□□□□□ -0.33
CSGALNACT1-216ENST00000524213 SERPINE2P07093 398 aa12.96□□□□□ -0.33
CSGALNACT1-216ENST00000524213 PI3P19957 117 aa12.96□□□□□ -0.33
CSGALNACT1-216ENST00000524213 RPL27AP46776 148 aaKnown RBP12.96□□□□□ -0.33
CSGALNACT1-216ENST00000524213 RAB9AP51151 201 aa12.96□□□□□ -0.33
CSGALNACT1-216ENST00000524213 RPL8P62917 257 aaKnown RBP12.96□□□□□ -0.33
CSGALNACT1-216ENST00000524213 DEFA6Q01524 100 aa12.96□□□□□ -0.33
CSGALNACT1-216ENST00000524213 CNPY1Q3B7I2 92 aa12.96□□□□□ -0.33
CSGALNACT1-216ENST00000524213 ZNF57Q68EA5 555 aaPredicted RBP12.96□□□□□ -0.33
CSGALNACT1-216ENST00000524213 ZNF695Q8IW36 515 aa12.96□□□□□ -0.33
CSGALNACT1-216ENST00000524213 KLHL30-AS1Q8NEE0 82 aa12.96□□□□□ -0.33
CSGALNACT1-216ENST00000524213 SLA2Q9H6Q3 261 aa12.96□□□□□ -0.33
CSGALNACT1-216ENST00000524213 TMEM140Q9NV12 185 aa12.96□□□□□ -0.33
CSGALNACT1-216ENST00000524213 C3orf85A0A1B0GTC6 90 aa12.95□□□□□ -0.34
CSGALNACT1-216ENST00000524213 ATG12O94817 140 aa12.95□□□□□ -0.34
CSGALNACT1-216ENST00000524213 PF4P02776 101 aa12.95□□□□□ -0.34
CSGALNACT1-216ENST00000524213 IL6RP08887 468 aaPredicted RBP12.95□□□□□ -0.34
CSGALNACT1-216ENST00000524213 SLC25A42Q86VD7 318 aa12.95□□□□□ -0.34
CSGALNACT1-216ENST00000524213 C1QL4Q86Z23 238 aa12.95□□□□□ -0.34
CSGALNACT1-216ENST00000524213 MYOZ3Q8TDC0 251 aa12.95□□□□□ -0.34
CSGALNACT1-216ENST00000524213 MRGPRFQ96AM1 343 aa12.95□□□□□ -0.34
CSGALNACT1-216ENST00000524213 UBE2E2Q96LR5 201 aa12.95□□□□□ -0.34
CSGALNACT1-216ENST00000524213 TSC22D3Q99576 134 aa12.95□□□□□ -0.34
CSGALNACT1-216ENST00000524213 ZNF355PQ9NSJ1 428 aa12.95□□□□□ -0.34
CSGALNACT1-216ENST00000524213 NAP1L6A6NFF2 107 aa12.94□□□□□ -0.34
CSGALNACT1-216ENST00000524213 WIPF1O43516 503 aa12.94□□□□□ -0.34
CSGALNACT1-216ENST00000524213 SOX15O60248 233 aa12.94□□□□□ -0.34
CSGALNACT1-216ENST00000524213 SNAPC5O75971 98 aa12.94□□□□□ -0.34
CSGALNACT1-216ENST00000524213 BRI3O95415 125 aa12.94□□□□□ -0.34
CSGALNACT1-216ENST00000524213 KRASP01116 189 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms