RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 M0R1W7 72 aa16.83■□□□□ 0.28
SQLE-206ENST00000523430 UPK2O00526 184 aa16.83■□□□□ 0.28
SQLE-206ENST00000523430 VDAC2P45880 294 aaPredicted RBP16.83■□□□□ 0.28
SQLE-206ENST00000523430 SLC38A11Q08AI6 406 aa16.83■□□□□ 0.28
SQLE-206ENST00000523430 KLRD1Q13241 179 aa16.83■□□□□ 0.28
SQLE-206ENST00000523430 TMEM182Q6ZP80 229 aaPredicted RBP16.83■□□□□ 0.28
SQLE-206ENST00000523430 CLDND2Q8NHS1 167 aa16.83■□□□□ 0.28
SQLE-206ENST00000523430 LHX4Q969G2 390 aa16.83■□□□□ 0.28
SQLE-206ENST00000523430 C15orf62A8K5M9 175 aa16.82■□□□□ 0.28
SQLE-206ENST00000523430 HOXA1P49639 335 aaPredicted RBP16.82■□□□□ 0.28
SQLE-206ENST00000523430 LCN2P80188 198 aa16.82■□□□□ 0.28
SQLE-206ENST00000523430 PXDC1Q5TGL8 231 aa16.82■□□□□ 0.28
SQLE-206ENST00000523430 PUSL1Q8N0Z8 303 aaKnown RBP16.82■□□□□ 0.28
SQLE-206ENST00000523430 OR4C13Q8NGP0 309 aa16.82■□□□□ 0.28
SQLE-206ENST00000523430 TSNAXQ99598 290 aaKnown RBP16.82■□□□□ 0.28
SQLE-206ENST00000523430 RAB13P51153 203 aa16.82■□□□□ 0.28
SQLE-206ENST00000523430 LDLRAD2Q5SZI1 272 aa16.82■□□□□ 0.28
SQLE-206ENST00000523430 Q6ZRG5 221 aa16.82■□□□□ 0.28
SQLE-206ENST00000523430 BET1LQ9NYM9 111 aa16.82■□□□□ 0.28
SQLE-206ENST00000523430 OR51B2Q9Y5P1 312 aa16.82■□□□□ 0.28
SQLE-206ENST00000523430 FGF2P09038 288 aa16.81■□□□□ 0.28
SQLE-206ENST00000523430 FHITP49789 147 aa16.81■□□□□ 0.28
SQLE-206ENST00000523430 PDLIM4P50479 330 aa16.81■□□□□ 0.28
SQLE-206ENST00000523430 HCP5Q6MZN7 132 aa16.81■□□□□ 0.28
SQLE-206ENST00000523430 SAT2Q96F10 170 aaPredicted RBP16.81■□□□□ 0.28
SQLE-206ENST00000523430 RITA1Q96K30 269 aa16.81■□□□□ 0.28
SQLE-206ENST00000523430 PRNDQ9UKY0 176 aa16.81■□□□□ 0.28
SQLE-206ENST00000523430 AMMECR1Q9Y4X0 333 aaPredicted RBP16.81■□□□□ 0.28
SQLE-206ENST00000523430 ARHGAP32A7KAX9 2087 aa16.81■□□□□ 0.28
SQLE-206ENST00000523430 IGHV1-3A0A0C4DH29 117 aa16.8■□□□□ 0.28
SQLE-206ENST00000523430 UBE2L5PA0A1B0GUS4 154 aa16.8■□□□□ 0.28
SQLE-206ENST00000523430 KBTBD11O94819 623 aa16.8■□□□□ 0.28
SQLE-206ENST00000523430 IGLV2-23P01705 113 aa16.8■□□□□ 0.28
SQLE-206ENST00000523430 OPN1MWP04001 364 aa16.8■□□□□ 0.28
SQLE-206ENST00000523430 OPN1MW2P0DN77 364 aa16.8■□□□□ 0.28
SQLE-206ENST00000523430 OPN1MW3P0DN78 364 aa16.8■□□□□ 0.28
SQLE-206ENST00000523430 LMO4P61968 165 aa16.8■□□□□ 0.28
SQLE-206ENST00000523430 SLC25A24Q6NUK1 477 aa16.8■□□□□ 0.28
SQLE-206ENST00000523430 HSD17B13Q7Z5P4 300 aaPredicted RBP16.8■□□□□ 0.28
SQLE-206ENST00000523430 OR2G3Q8NGZ4 309 aa16.8■□□□□ 0.28
SQLE-206ENST00000523430 HEYLQ9NQ87 328 aaPredicted RBP16.8■□□□□ 0.28
SQLE-206ENST00000523430 CACFD1Q9UGQ2 172 aa16.8■□□□□ 0.28
SQLE-206ENST00000523430 UTP20O75691 2785 aaKnown RBP16.8■□□□□ 0.28
SQLE-206ENST00000523430 LY6LH3BQJ8 138 aa16.8■□□□□ 0.28
SQLE-206ENST00000523430 ENSAO43768 121 aaKnown RBP16.8■□□□□ 0.28
SQLE-206ENST00000523430 IFNA5P01569 189 aa16.8■□□□□ 0.28
SQLE-206ENST00000523430 HSPE1P61604 102 aaKnown RBP16.8■□□□□ 0.28
SQLE-206ENST00000523430 PAX2Q02962 417 aa16.8■□□□□ 0.28
SQLE-206ENST00000523430 OR11H6Q8NGC7 330 aa16.8■□□□□ 0.28
SQLE-206ENST00000523430 NRGNQ92686 78 aa16.8■□□□□ 0.28
SQLE-206ENST00000523430 RPEQ96AT9 228 aa16.8■□□□□ 0.28
SQLE-206ENST00000523430 CLCC1Q96S66 551 aa16.8■□□□□ 0.28
SQLE-206ENST00000523430 MS4A7Q9GZW8 240 aaPredicted RBP16.8■□□□□ 0.28
SQLE-206ENST00000523430 HRH4Q9H3N8 390 aa16.8■□□□□ 0.28
SQLE-206ENST00000523430 SPTAN1Q13813 2472 aaKnown RBP16.79■□□□□ 0.28
SQLE-206ENST00000523430 PRTN3P24158 256 aa16.79■□□□□ 0.28
SQLE-206ENST00000523430 MC5RP33032 325 aa16.79■□□□□ 0.28
SQLE-206ENST00000523430 VMO1Q7Z5L0 202 aa16.79■□□□□ 0.28
SQLE-206ENST00000523430 KIR3DL3Q8N743 410 aa16.79■□□□□ 0.28
SQLE-206ENST00000523430 TMEM170AQ8WVE7 144 aa16.79■□□□□ 0.28
SQLE-206ENST00000523430 AIFM2Q9BRQ8 373 aa16.79■□□□□ 0.28
SQLE-206ENST00000523430 RSG1Q9BU20 258 aa16.79■□□□□ 0.28
SQLE-206ENST00000523430 HIPK2Q9H2X6 1198 aa16.79■□□□□ 0.28
SQLE-206ENST00000523430 MMP26Q9NRE1 261 aa16.79■□□□□ 0.28
SQLE-206ENST00000523430 AKAP6Q13023 2319 aa16.78■□□□□ 0.28
SQLE-206ENST00000523430 A8MXK9 166 aa16.78■□□□□ 0.28
SQLE-206ENST00000523430 COX6B1P14854 86 aa16.78■□□□□ 0.28
SQLE-206ENST00000523430 MOB3BQ86TA1 216 aa16.78■□□□□ 0.28
SQLE-206ENST00000523430 THNSL2Q86YJ6 484 aa16.78■□□□□ 0.28
SQLE-206ENST00000523430 GNPNAT1Q96EK6 184 aaPredicted RBP16.78■□□□□ 0.28
SQLE-206ENST00000523430 HINT2Q9BX68 163 aa16.78■□□□□ 0.28
SQLE-206ENST00000523430 PARP11Q9NR21 331 aa16.78■□□□□ 0.28
SQLE-206ENST00000523430 INSIG2Q9Y5U4 225 aa16.78■□□□□ 0.28
SQLE-206ENST00000523430 IGHV2-70DA0A0C4DH43 119 aa16.78■□□□□ 0.28
SQLE-206ENST00000523430 ODF3BA8MYP8 253 aa16.78■□□□□ 0.28
SQLE-206ENST00000523430 RRHO14718 337 aa16.78■□□□□ 0.28
SQLE-206ENST00000523430 IFNA10P01566 189 aa16.78■□□□□ 0.28
SQLE-206ENST00000523430 PRH1P02810 166 aa16.78■□□□□ 0.28
SQLE-206ENST00000523430 EIF4E3Q8N5X7 224 aaKnown RBP16.78■□□□□ 0.28
SQLE-206ENST00000523430 OR10P1Q8NGE3 313 aa16.78■□□□□ 0.28
SQLE-206ENST00000523430 TPSG1Q9NRR2 321 aa16.78■□□□□ 0.28
SQLE-206ENST00000523430 ZNF257Q9Y2Q1 563 aa16.78■□□□□ 0.28
SQLE-206ENST00000523430 TACC2O95359 2948 aa16.77■□□□□ 0.28
SQLE-206ENST00000523430 A0A1W2PPI3 338 aa16.77■□□□□ 0.27
SQLE-206ENST00000523430 A0A1W2PRD5 423 aa16.77■□□□□ 0.27
SQLE-206ENST00000523430 A0A1W2PRF3 423 aa16.77■□□□□ 0.27
SQLE-206ENST00000523430 A0A1W2PRM7 423 aa16.77■□□□□ 0.27
SQLE-206ENST00000523430 CAMLGP49069 296 aa16.77■□□□□ 0.27
SQLE-206ENST00000523430 PRCDQ00LT1 54 aa16.77■□□□□ 0.27
SQLE-206ENST00000523430 ZNF616Q08AN1 781 aa16.77■□□□□ 0.27
SQLE-206ENST00000523430 LRRC75BQ2VPJ9 315 aa16.77■□□□□ 0.27
SQLE-206ENST00000523430 TPTE2P1Q5T6R2 138 aa16.77■□□□□ 0.27
SQLE-206ENST00000523430 MARVELD3Q96A59 401 aa16.77■□□□□ 0.27
SQLE-206ENST00000523430 PINX1Q96BK5 328 aaKnown RBP16.77■□□□□ 0.27
SQLE-206ENST00000523430 WDR61Q9GZS3 305 aaKnown RBP16.77■□□□□ 0.27
SQLE-206ENST00000523430 ASH1LQ9NR48 2969 aaKnown RBP16.76■□□□□ 0.27
SQLE-206ENST00000523430 TEX50A0A1B0GTY4 177 aa16.76■□□□□ 0.27
SQLE-206ENST00000523430 SLC25A17O43808 307 aa16.76■□□□□ 0.27
SQLE-206ENST00000523430 LY86O95711 162 aa16.76■□□□□ 0.27
SQLE-206ENST00000523430 OR8U8P0C7N1 319 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms