RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 ZNF645Q8N7E2 425 aa19.33■□□□□ 0.68
PVT1-219ENST00000523427 UBQLN2Q9UHD9 624 aa19.33■□□□□ 0.68
PVT1-219ENST00000523427 ELF5Q9UKW6 265 aaPredicted RBP19.33■□□□□ 0.68
PVT1-219ENST00000523427 NPIPB5A8MRT5 1133 aa19.32■□□□□ 0.68
PVT1-219ENST00000523427 SPRY2O43597 315 aa19.32■□□□□ 0.68
PVT1-219ENST00000523427 DEFA4P12838 97 aa19.32■□□□□ 0.68
PVT1-219ENST00000523427 MYOD1P15172 320 aa19.32■□□□□ 0.68
PVT1-219ENST00000523427 OR10A3P58181 314 aa19.32■□□□□ 0.68
PVT1-219ENST00000523427 IRF3Q14653 427 aa19.32■□□□□ 0.68
PVT1-219ENST00000523427 TRAM1Q15629 374 aa19.32■□□□□ 0.68
PVT1-219ENST00000523427 ZNF585BQ52M93 769 aa19.32■□□□□ 0.68
PVT1-219ENST00000523427 SSX9Q7RTT3 188 aa19.32■□□□□ 0.68
PVT1-219ENST00000523427 OR1L6Q8NGR2 347 aa19.32■□□□□ 0.68
PVT1-219ENST00000523427 OR2A7Q96R45 310 aa19.32■□□□□ 0.68
PVT1-219ENST00000523427 SLC2A9Q9NRM0 540 aa19.32■□□□□ 0.68
PVT1-219ENST00000523427 SPATA2Q9UM82 520 aa19.32■□□□□ 0.68
PVT1-219ENST00000523427 RBMX2Q9Y388 322 aaKnown RBP19.32■□□□□ 0.68
PVT1-219ENST00000523427 A0A1B0GW64 132 aa19.31■□□□□ 0.68
PVT1-219ENST00000523427 DEDDO75618 318 aa19.31■□□□□ 0.68
PVT1-219ENST00000523427 KBTBD11O94819 623 aa19.31■□□□□ 0.68
PVT1-219ENST00000523427 MAP2K4P45985 399 aa19.31■□□□□ 0.68
PVT1-219ENST00000523427 PSMD7P51665 324 aa19.31■□□□□ 0.68
PVT1-219ENST00000523427 OR4A47Q6IF82 309 aa19.31■□□□□ 0.68
PVT1-219ENST00000523427 UNQ9165/PRO28630Q6UXU0 137 aa19.31■□□□□ 0.68
PVT1-219ENST00000523427 TCTEX1D2Q8WW35 142 aa19.31■□□□□ 0.68
PVT1-219ENST00000523427 KLK5Q9Y337 293 aaPredicted RBP19.31■□□□□ 0.68
PVT1-219ENST00000523427 A8MWP6 167 aa19.3■□□□□ 0.68
PVT1-219ENST00000523427 CLEC3BP05452 202 aa19.3■□□□□ 0.68
PVT1-219ENST00000523427 CD36P16671 472 aa19.3■□□□□ 0.68
PVT1-219ENST00000523427 PSMB6P28072 239 aa19.3■□□□□ 0.68
PVT1-219ENST00000523427 RANBP1P43487 201 aa19.3■□□□□ 0.68
PVT1-219ENST00000523427 CCDC90BQ9GZT6 254 aa19.3■□□□□ 0.68
PVT1-219ENST00000523427 OR2W1Q9Y3N9 320 aa19.3■□□□□ 0.68
PVT1-219ENST00000523427 MFSD2BA6NFX1 497 aa19.29■□□□□ 0.68
PVT1-219ENST00000523427 DHFRP00374 187 aa19.29■□□□□ 0.68
PVT1-219ENST00000523427 PSMA1P25786 263 aaKnown RBP19.29■□□□□ 0.68
PVT1-219ENST00000523427 BMI1P35226 326 aa19.29■□□□□ 0.68
PVT1-219ENST00000523427 TNFRSF9Q07011 255 aa19.29■□□□□ 0.68
PVT1-219ENST00000523427 OGFRL1Q5TC84 451 aaPredicted RBP19.29■□□□□ 0.68
PVT1-219ENST00000523427 OR4S2Q8NH73 311 aa19.29■□□□□ 0.68
PVT1-219ENST00000523427 VSTM2AQ8TAG5 236 aa19.29■□□□□ 0.68
PVT1-219ENST00000523427 TMEM167AQ8TBQ9 72 aa19.29■□□□□ 0.68
PVT1-219ENST00000523427 GPHA2Q96T91 129 aa19.29■□□□□ 0.68
PVT1-219ENST00000523427 EBAG9O00559 213 aa19.28■□□□□ 0.68
PVT1-219ENST00000523427 ZNF735P0CB33 412 aa19.28■□□□□ 0.68
PVT1-219ENST00000523427 GPR183P32249 361 aa19.28■□□□□ 0.68
PVT1-219ENST00000523427 APOC4P55056 127 aa19.28■□□□□ 0.68
PVT1-219ENST00000523427 CENPOQ9BU64 300 aa19.28■□□□□ 0.68
PVT1-219ENST00000523427 ATG5Q9H1Y0 275 aa19.28■□□□□ 0.68
PVT1-219ENST00000523427 TAS2R8Q9NYW2 309 aa19.28■□□□□ 0.68
PVT1-219ENST00000523427 IGKV1D-13A0A0B4J2D9 117 aa19.27■□□□□ 0.68
PVT1-219ENST00000523427 METTL21EPA6NDL7 271 aa19.27■□□□□ 0.68
PVT1-219ENST00000523427 CRYGCP07315 174 aa19.27■□□□□ 0.68
PVT1-219ENST00000523427 IGKV1-13P0DP09 117 aa19.27■□□□□ 0.68
PVT1-219ENST00000523427 SLC38A6Q8IZM9 456 aa19.27■□□□□ 0.68
PVT1-219ENST00000523427 PUSL1Q8N0Z8 303 aaKnown RBP19.27■□□□□ 0.68
PVT1-219ENST00000523427 OR2C3Q8N628 320 aa19.27■□□□□ 0.68
PVT1-219ENST00000523427 TRAV25A0A0B4J276 109 aa19.26■□□□□ 0.67
PVT1-219ENST00000523427 IGLV2-14P01704 120 aa19.26■□□□□ 0.67
PVT1-219ENST00000523427 HLA-DQB1P01920 261 aa19.26■□□□□ 0.67
PVT1-219ENST00000523427 HIST1H1BP16401 226 aaKnown RBP19.26■□□□□ 0.67
PVT1-219ENST00000523427 CTRB1P17538 263 aa19.26■□□□□ 0.67
PVT1-219ENST00000523427 RPL35AP18077 110 aaKnown RBP19.26■□□□□ 0.67
PVT1-219ENST00000523427 MAS1LP35410 378 aa19.26■□□□□ 0.67
PVT1-219ENST00000523427 MLLT11Q13015 90 aaPredicted RBP19.26■□□□□ 0.67
PVT1-219ENST00000523427 CTRB2Q6GPI1 263 aa19.26■□□□□ 0.67
PVT1-219ENST00000523427 Q6ZS49 121 aa19.26■□□□□ 0.67
PVT1-219ENST00000523427 Q6ZWC4 215 aa19.26■□□□□ 0.67
PVT1-219ENST00000523427 WFDC3Q8IUB2 231 aa19.26■□□□□ 0.67
PVT1-219ENST00000523427 TP53TG1Q9Y2A0 90 aa19.26■□□□□ 0.67
PVT1-219ENST00000523427 TPRKBQ9Y3C4 175 aa19.26■□□□□ 0.67
PVT1-219ENST00000523427 PDCD5O14737 125 aa19.25■□□□□ 0.67
PVT1-219ENST00000523427 RAB6AP20340 208 aa19.25■□□□□ 0.67
PVT1-219ENST00000523427 CDNFQ49AH0 187 aa19.25■□□□□ 0.67
PVT1-219ENST00000523427 PLET1Q6UQ28 207 aa19.25■□□□□ 0.67
PVT1-219ENST00000523427 MARC2Q969Z3 335 aa19.25■□□□□ 0.67
PVT1-219ENST00000523427 MGLLQ99685 303 aa19.25■□□□□ 0.67
PVT1-219ENST00000523427 ACOT13Q9NPJ3 140 aa19.25■□□□□ 0.67
PVT1-219ENST00000523427 MRPL27Q9P0M9 148 aaKnown RBP19.25■□□□□ 0.67
PVT1-219ENST00000523427 IGLV11-55A0A075B6I3 123 aa19.24■□□□□ 0.67
PVT1-219ENST00000523427 TRBV7-1A0A0A6YYK4 115 aa19.24■□□□□ 0.67
PVT1-219ENST00000523427 IFITM5A6NNB3 132 aa19.24■□□□□ 0.67
PVT1-219ENST00000523427 RGS10O43665 173 aa19.24■□□□□ 0.67
PVT1-219ENST00000523427 RPA2P15927 270 aa19.24■□□□□ 0.67
PVT1-219ENST00000523427 RPL8P62917 257 aaKnown RBP19.24■□□□□ 0.67
PVT1-219ENST00000523427 MFSD4AQ8N468 514 aa19.24■□□□□ 0.67
PVT1-219ENST00000523427 STPG3Q8N7X2 389 aa19.24■□□□□ 0.67
PVT1-219ENST00000523427 CXorf58Q96LI9 332 aa19.24■□□□□ 0.67
PVT1-219ENST00000523427 HSD17B10Q99714 261 aaKnown RBP19.24■□□□□ 0.67
PVT1-219ENST00000523427 VCXQ9H320 206 aa19.24■□□□□ 0.67
PVT1-219ENST00000523427 UFC1Q9Y3C8 167 aa19.24■□□□□ 0.67
PVT1-219ENST00000523427 KMT2AQ03164 3969 aa19.23■□□□□ 0.67
PVT1-219ENST00000523427 SMIM30A4D0T7 59 aa19.23■□□□□ 0.67
PVT1-219ENST00000523427 TNFSF12O43508 249 aa19.23■□□□□ 0.67
PVT1-219ENST00000523427 SLC22A5O76082 557 aa19.23■□□□□ 0.67
PVT1-219ENST00000523427 CTXN2P0C2S0 81 aa19.23■□□□□ 0.67
PVT1-219ENST00000523427 C8orf88P0DMB2 117 aa19.23■□□□□ 0.67
PVT1-219ENST00000523427 HLA-GP17693 338 aa19.23■□□□□ 0.67
PVT1-219ENST00000523427 DTYMKP23919 212 aa19.23■□□□□ 0.67
PVT1-219ENST00000523427 BRWD1-AS2P59051 145 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms