RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 E9PLN8 166 aa10.99□□□□□ -0.65
PCDHGB1-201ENST00000523390 DNASE2O00115 360 aaPredicted RBP10.99□□□□□ -0.65
PCDHGB1-201ENST00000523390 CXorf1O96002 111 aa10.99□□□□□ -0.65
PCDHGB1-201ENST00000523390 SELLP14151 372 aa10.99□□□□□ -0.65
PCDHGB1-201ENST00000523390 S100A4P26447 101 aaKnown RBP10.99□□□□□ -0.65
PCDHGB1-201ENST00000523390 KHDC3LQ587J8 217 aa10.99□□□□□ -0.65
PCDHGB1-201ENST00000523390 LY6G6FQ5SQ64 297 aa10.99□□□□□ -0.65
PCDHGB1-201ENST00000523390 C5orf24Q7Z6I8 188 aa10.99□□□□□ -0.65
PCDHGB1-201ENST00000523390 TMEM186Q96B77 213 aa10.99□□□□□ -0.65
PCDHGB1-201ENST00000523390 VKORC1Q9BQB6 163 aa10.99□□□□□ -0.65
PCDHGB1-201ENST00000523390 KBTBD11-OT1A0A1B0GTJ5 212 aa10.99□□□□□ -0.65
PCDHGB1-201ENST00000523390 AARDQ4LEZ3 155 aa10.99□□□□□ -0.65
PCDHGB1-201ENST00000523390 PERPQ96FX8 193 aa10.99□□□□□ -0.65
PCDHGB1-201ENST00000523390 CHODLQ9H9P2 273 aa10.99□□□□□ -0.65
PCDHGB1-201ENST00000523390 ZNF581Q9P0T4 197 aa10.99□□□□□ -0.65
PCDHGB1-201ENST00000523390 RNF222A6NCQ9 220 aa10.99□□□□□ -0.65
PCDHGB1-201ENST00000523390 IGHG3P01860 377 aa10.99□□□□□ -0.65
PCDHGB1-201ENST00000523390 USF1P22415 310 aaPredicted RBP10.99□□□□□ -0.65
PCDHGB1-201ENST00000523390 RANP62826 216 aaKnown RBP10.99□□□□□ -0.65
PCDHGB1-201ENST00000523390 DEFA6Q01524 100 aa10.99□□□□□ -0.65
PCDHGB1-201ENST00000523390 REG4Q9BYZ8 158 aa10.99□□□□□ -0.65
PCDHGB1-201ENST00000523390 CLEC5AQ9NY25 188 aa10.99□□□□□ -0.65
PCDHGB1-201ENST00000523390 CDKN1AP38936 164 aa10.98□□□□□ -0.65
PCDHGB1-201ENST00000523390 CAMPP49913 170 aa10.98□□□□□ -0.65
PCDHGB1-201ENST00000523390 RND3P61587 244 aa10.98□□□□□ -0.65
PCDHGB1-201ENST00000523390 OR10G8Q8NGN5 311 aa10.98□□□□□ -0.65
PCDHGB1-201ENST00000523390 HIST1H3AP68431 136 aa10.98□□□□□ -0.65
PCDHGB1-201ENST00000523390 SMIM8Q96KF7 97 aa10.98□□□□□ -0.65
PCDHGB1-201ENST00000523390 ATRXP46100 2492 aa10.98□□□□□ -0.65
PCDHGB1-201ENST00000523390 PCDH15Q96QU1 1955 aa10.98□□□□□ -0.65
PCDHGB1-201ENST00000523390 DHRS7BQ6IAN0 325 aaPredicted RBP10.98□□□□□ -0.65
PCDHGB1-201ENST00000523390 RAB24Q969Q5 203 aa10.98□□□□□ -0.65
PCDHGB1-201ENST00000523390 MPDU1O75352 247 aa10.97□□□□□ -0.65
PCDHGB1-201ENST00000523390 ZNF788Q6ZQV5 615 aa10.97□□□□□ -0.65
PCDHGB1-201ENST00000523390 SPSB4Q96A44 273 aa10.97□□□□□ -0.65
PCDHGB1-201ENST00000523390 SRSF10O75494 262 aaKnown RBP10.97□□□□□ -0.65
PCDHGB1-201ENST00000523390 ZNF497Q6ZNH5 498 aa10.97□□□□□ -0.65
PCDHGB1-201ENST00000523390 OR2T10Q8NGZ9 312 aa10.97□□□□□ -0.65
PCDHGB1-201ENST00000523390 SLC25A15Q9Y619 301 aa10.97□□□□□ -0.65
PCDHGB1-201ENST00000523390 HYPMO75409 117 aa10.97□□□□□ -0.65
PCDHGB1-201ENST00000523390 IGHV1-46P01743 117 aa10.97□□□□□ -0.65
PCDHGB1-201ENST00000523390 GRAMD2BQ96HH9 432 aa10.97□□□□□ -0.65
PCDHGB1-201ENST00000523390 TOLLIPQ9H0E2 274 aa10.97□□□□□ -0.65
PCDHGB1-201ENST00000523390 OBSL1O75147 1896 aa10.97□□□□□ -0.65
PCDHGB1-201ENST00000523390 HELTA6NFD8 242 aa10.97□□□□□ -0.65
PCDHGB1-201ENST00000523390 HSBP1O75506 76 aa10.97□□□□□ -0.65
PCDHGB1-201ENST00000523390 FABP4P15090 132 aa10.97□□□□□ -0.65
PCDHGB1-201ENST00000523390 TMEM30BQ3MIR4 351 aa10.97□□□□□ -0.65
PCDHGB1-201ENST00000523390 FOXL2NBQ6ZUU3 175 aa10.97□□□□□ -0.65
PCDHGB1-201ENST00000523390 DPF1Q92782 380 aa10.97□□□□□ -0.65
PCDHGB1-201ENST00000523390 FREM1Q5H8C1 2179 aa10.97□□□□□ -0.65
PCDHGB1-201ENST00000523390 FCN1O00602 326 aa10.96□□□□□ -0.65
PCDHGB1-201ENST00000523390 PSPNO60542 156 aa10.96□□□□□ -0.65
PCDHGB1-201ENST00000523390 FAM106CPP0CH98 169 aa10.96□□□□□ -0.65
PCDHGB1-201ENST00000523390 SIGLECL1Q8N7X8 197 aa10.96□□□□□ -0.65
PCDHGB1-201ENST00000523390 TMEM18Q96B42 140 aa10.96□□□□□ -0.65
PCDHGB1-201ENST00000523390 GAR1Q9NY12 217 aaKnown RBP10.96□□□□□ -0.65
PCDHGB1-201ENST00000523390 KIAA1324LA8MWY0 1029 aaPredicted RBP10.96□□□□□ -0.65
PCDHGB1-201ENST00000523390 NCMAPQ5T1S8 102 aa10.96□□□□□ -0.65
PCDHGB1-201ENST00000523390 PAXXQ9BUH6 204 aa10.96□□□□□ -0.65
PCDHGB1-201ENST00000523390 ANKHD1Q8IWZ3 2542 aaKnown RBP10.96□□□□□ -0.65
PCDHGB1-201ENST00000523390 H0YIZ8 118 aa10.96□□□□□ -0.66
PCDHGB1-201ENST00000523390 MEF2BQ02080 365 aaPredicted RBP10.96□□□□□ -0.66
PCDHGB1-201ENST00000523390 DPPA3Q6W0C5 159 aa10.96□□□□□ -0.66
PCDHGB1-201ENST00000523390 DTX1Q86Y01 620 aa10.96□□□□□ -0.66
PCDHGB1-201ENST00000523390 WDFY1Q8IWB7 410 aa10.96□□□□□ -0.66
PCDHGB1-201ENST00000523390 WDR61Q9GZS3 305 aaKnown RBP10.96□□□□□ -0.66
PCDHGB1-201ENST00000523390 RPRMQ9NS64 109 aa10.96□□□□□ -0.66
PCDHGB1-201ENST00000523390 IGF2RP11717 2491 aa10.96□□□□□ -0.66
PCDHGB1-201ENST00000523390 MBD3L4A6NDZ8 208 aaPredicted RBP10.96□□□□□ -0.66
PCDHGB1-201ENST00000523390 MBD3L3A6NE82 208 aaPredicted RBP10.96□□□□□ -0.66
PCDHGB1-201ENST00000523390 MBD3L5A6NJ08 208 aaPredicted RBP10.96□□□□□ -0.66
PCDHGB1-201ENST00000523390 LCN2P80188 198 aa10.96□□□□□ -0.66
PCDHGB1-201ENST00000523390 TMEM42Q69YG0 159 aa10.96□□□□□ -0.66
PCDHGB1-201ENST00000523390 FAM90A1Q86YD7 464 aa10.96□□□□□ -0.66
PCDHGB1-201ENST00000523390 RPRMLQ8N4K4 120 aa10.96□□□□□ -0.66
PCDHGB1-201ENST00000523390 MBD3L2Q8NHZ7 208 aaPredicted RBP10.96□□□□□ -0.66
PCDHGB1-201ENST00000523390 GTF3AQ92664 365 aaKnown RBP10.96□□□□□ -0.66
PCDHGB1-201ENST00000523390 ZNF586Q9NXT0 402 aa10.96□□□□□ -0.66
PCDHGB1-201ENST00000523390 S100A8P05109 93 aa10.95□□□□□ -0.66
PCDHGB1-201ENST00000523390 ZNF474Q6S9Z5 364 aaPredicted RBP10.95□□□□□ -0.66
PCDHGB1-201ENST00000523390 UNQ5815/PRO19632Q6UWF5 114 aa10.95□□□□□ -0.66
PCDHGB1-201ENST00000523390 OR5AU1Q8NGC0 362 aa10.95□□□□□ -0.66
PCDHGB1-201ENST00000523390 P2RX4Q99571 388 aa10.95□□□□□ -0.66
PCDHGB1-201ENST00000523390 MALRD1Q5VYJ5 2156 aa10.95□□□□□ -0.66
PCDHGB1-201ENST00000523390 A0A0G2JNJ9 132 aa10.95□□□□□ -0.66
PCDHGB1-201ENST00000523390 PDE6DO43924 150 aa10.95□□□□□ -0.66
PCDHGB1-201ENST00000523390 NDUFB4O95168 129 aa10.95□□□□□ -0.66
PCDHGB1-201ENST00000523390 STXBP6Q8NFX7 210 aa10.95□□□□□ -0.66
PCDHGB1-201ENST00000523390 WFIKKN1Q96NZ8 548 aa10.95□□□□□ -0.66
PCDHGB1-201ENST00000523390 RARRES2Q99969 163 aa10.95□□□□□ -0.66
PCDHGB1-201ENST00000523390 RNF126Q9BV68 326 aa10.95□□□□□ -0.66
PCDHGB1-201ENST00000523390 MRPL20Q9BYC9 149 aaKnown RBP10.95□□□□□ -0.66
PCDHGB1-201ENST00000523390 Q9UFV3 132 aa10.95□□□□□ -0.66
PCDHGB1-201ENST00000523390 SRRM5B3KS81 715 aa10.95□□□□□ -0.66
PCDHGB1-201ENST00000523390 TM4SF5O14894 197 aa10.95□□□□□ -0.66
PCDHGB1-201ENST00000523390 DANCRP0C864 163 aa10.95□□□□□ -0.66
PCDHGB1-201ENST00000523390 LY6EQ16553 131 aa10.95□□□□□ -0.66
PCDHGB1-201ENST00000523390 C16orf82Q7Z2V1 217 aa10.95□□□□□ -0.66
PCDHGB1-201ENST00000523390 NPIPB3Q92617 1050 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms