RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 A0A1W2PPI3 338 aa12.47□□□□□ -0.41
CTNNA1-236ENST00000522792 ANKRD34BA5PLL1 514 aa12.47□□□□□ -0.41
CTNNA1-236ENST00000522792 MED6O75586 246 aa12.47□□□□□ -0.41
CTNNA1-236ENST00000522792 IFNA7P01567 189 aa12.47□□□□□ -0.41
CTNNA1-236ENST00000522792 SLC25A16P16260 332 aa12.47□□□□□ -0.41
CTNNA1-236ENST00000522792 USF1P22415 310 aaPredicted RBP12.47□□□□□ -0.41
CTNNA1-236ENST00000522792 RPL7L1Q6DKI1 246 aaKnown RBP12.47□□□□□ -0.41
CTNNA1-236ENST00000522792 MS4A7Q9GZW8 240 aaPredicted RBP12.47□□□□□ -0.41
CTNNA1-236ENST00000522792 SLC25A31Q9H0C2 315 aa12.47□□□□□ -0.41
CTNNA1-236ENST00000522792 NUP50Q9UKX7 468 aa12.47□□□□□ -0.41
CTNNA1-236ENST00000522792 WSB1Q9Y6I7 421 aa12.47□□□□□ -0.41
CTNNA1-236ENST00000522792 ABCA2Q9BZC7 2435 aa12.46□□□□□ -0.41
CTNNA1-236ENST00000522792 C15orf61A6NNL5 157 aa12.46□□□□□ -0.41
CTNNA1-236ENST00000522792 TXNL1O43396 289 aa12.46□□□□□ -0.41
CTNNA1-236ENST00000522792 SPANXN5Q5MJ07 72 aa12.46□□□□□ -0.41
CTNNA1-236ENST00000522792 TMEM217Q8N7C4 229 aa12.46□□□□□ -0.41
CTNNA1-236ENST00000522792 DTD1Q8TEA8 209 aa12.46□□□□□ -0.41
CTNNA1-236ENST00000522792 PCNPQ8WW12 178 aaKnown RBP12.46□□□□□ -0.41
CTNNA1-236ENST00000522792 SMIM8Q96KF7 97 aa12.46□□□□□ -0.41
CTNNA1-236ENST00000522792 WFDC1Q9HC57 220 aa12.46□□□□□ -0.41
CTNNA1-236ENST00000522792 UBQLN2Q9UHD9 624 aa12.46□□□□□ -0.41
CTNNA1-236ENST00000522792 CENPEQ02224 2701 aa12.46□□□□□ -0.42
CTNNA1-236ENST00000522792 MED13LQ71F56 2210 aa12.46□□□□□ -0.42
CTNNA1-236ENST00000522792 UPK2O00526 184 aa12.45□□□□□ -0.42
CTNNA1-236ENST00000522792 TIMM23O14925 209 aa12.45□□□□□ -0.42
CTNNA1-236ENST00000522792 CEACAM3P40198 252 aa12.45□□□□□ -0.42
CTNNA1-236ENST00000522792 ARHGDIBP52566 201 aa12.45□□□□□ -0.42
CTNNA1-236ENST00000522792 TAAR5O14804 337 aa12.45□□□□□ -0.42
CTNNA1-236ENST00000522792 OPN1MWP04001 364 aa12.45□□□□□ -0.42
CTNNA1-236ENST00000522792 OPN1MW2P0DN77 364 aa12.45□□□□□ -0.42
CTNNA1-236ENST00000522792 OPN1MW3P0DN78 364 aa12.45□□□□□ -0.42
CTNNA1-236ENST00000522792 HTR2BP41595 481 aa12.45□□□□□ -0.42
CTNNA1-236ENST00000522792 LGALS4P56470 323 aa12.45□□□□□ -0.42
CTNNA1-236ENST00000522792 CLINT1Q14677 625 aa12.45□□□□□ -0.42
CTNNA1-236ENST00000522792 SSX2Q16385 188 aa12.45□□□□□ -0.42
CTNNA1-236ENST00000522792 AARDQ4LEZ3 155 aa12.45□□□□□ -0.42
CTNNA1-236ENST00000522792 OR8H3Q8N146 312 aa12.45□□□□□ -0.42
CTNNA1-236ENST00000522792 AIFM2Q9BRQ8 373 aa12.45□□□□□ -0.42
CTNNA1-236ENST00000522792 BET1LQ9NYM9 111 aa12.45□□□□□ -0.42
CTNNA1-236ENST00000522792 FOXA2Q9Y261 457 aaPredicted RBP12.45□□□□□ -0.42
CTNNA1-236ENST00000522792 POLQO75417 2590 aa12.45□□□□□ -0.42
CTNNA1-236ENST00000522792 IGLV2-23P01705 113 aa12.44□□□□□ -0.42
CTNNA1-236ENST00000522792 IL6RP08887 468 aaPredicted RBP12.44□□□□□ -0.42
CTNNA1-236ENST00000522792 METTL15P1P0C7V9 234 aa12.44□□□□□ -0.42
CTNNA1-236ENST00000522792 CNTFRP26992 372 aa12.44□□□□□ -0.42
CTNNA1-236ENST00000522792 DYNLT3P51808 116 aa12.44□□□□□ -0.42
CTNNA1-236ENST00000522792 SPCS3P61009 180 aa12.44□□□□□ -0.42
CTNNA1-236ENST00000522792 PAX8Q06710 450 aa12.44□□□□□ -0.42
CTNNA1-236ENST00000522792 PUSL1Q8N0Z8 303 aaKnown RBP12.44□□□□□ -0.42
CTNNA1-236ENST00000522792 DYNAPQ8N1N2 210 aa12.44□□□□□ -0.42
CTNNA1-236ENST00000522792 MAPK1IP1LQ8NDC0 245 aa12.44□□□□□ -0.42
CTNNA1-236ENST00000522792 TMEM14BQ9NUH8 114 aa12.44□□□□□ -0.42
CTNNA1-236ENST00000522792 TCF19Q9Y242 345 aa12.44□□□□□ -0.42
CTNNA1-236ENST00000522792 OR51B2Q9Y5P1 312 aa12.44□□□□□ -0.42
CTNNA1-236ENST00000522792 ANKRD17O75179 2603 aaKnown RBP12.44□□□□□ -0.42
CTNNA1-236ENST00000522792 SLC25A17O43808 307 aa12.44□□□□□ -0.42
CTNNA1-236ENST00000522792 KBTBD11O94819 623 aa12.44□□□□□ -0.42
CTNNA1-236ENST00000522792 MSMBP08118 114 aa12.44□□□□□ -0.42
CTNNA1-236ENST00000522792 TPT1P13693 172 aaKnown RBP12.44□□□□□ -0.42
CTNNA1-236ENST00000522792 TAS2R30P59541 319 aa12.44□□□□□ -0.42
CTNNA1-236ENST00000522792 Q5PR19 223 aa12.44□□□□□ -0.42
CTNNA1-236ENST00000522792 ZNF429Q86V71 674 aa12.44□□□□□ -0.42
CTNNA1-236ENST00000522792 STX12Q86Y82 276 aa12.44□□□□□ -0.42
CTNNA1-236ENST00000522792 OR5C1Q8NGR4 320 aa12.44□□□□□ -0.42
CTNNA1-236ENST00000522792 STOML3Q8TAV4 291 aa12.44□□□□□ -0.42
CTNNA1-236ENST00000522792 OR4C12Q96R67 309 aa12.44□□□□□ -0.42
CTNNA1-236ENST00000522792 HINT2Q9BX68 163 aa12.44□□□□□ -0.42
CTNNA1-236ENST00000522792 TPSG1Q9NRR2 321 aa12.44□□□□□ -0.42
CTNNA1-236ENST00000522792 IGHV3OR16-10A0A075B7F0 116 aa12.43□□□□□ -0.42
CTNNA1-236ENST00000522792 CD24P25063 80 aa12.43□□□□□ -0.42
CTNNA1-236ENST00000522792 HOXA1P49639 335 aaPredicted RBP12.43□□□□□ -0.42
CTNNA1-236ENST00000522792 SULT1A1P50225 295 aa12.43□□□□□ -0.42
CTNNA1-236ENST00000522792 UBE2E1P51965 193 aa12.43□□□□□ -0.42
CTNNA1-236ENST00000522792 FAM74A1Q5RGS3 127 aa12.43□□□□□ -0.42
CTNNA1-236ENST00000522792 OR52E5Q8NH55 327 aa12.43□□□□□ -0.42
CTNNA1-236ENST00000522792 PRNDQ9UKY0 176 aa12.43□□□□□ -0.42
CTNNA1-236ENST00000522792 PTPN13Q12923 2485 aa12.43□□□□□ -0.42
CTNNA1-236ENST00000522792 HELZ2Q9BYK8 2649 aaKnown RBP12.43□□□□□ -0.42
CTNNA1-236ENST00000522792 TET2Q6N021 2002 aaPredicted RBP12.42□□□□□ -0.42
CTNNA1-236ENST00000522792 A0A096LNT2 108 aa12.42□□□□□ -0.42
CTNNA1-236ENST00000522792 RNF223E7ERA6 249 aa12.42□□□□□ -0.42
CTNNA1-236ENST00000522792 BAXQ07812 192 aa12.42□□□□□ -0.42
CTNNA1-236ENST00000522792 VMA21Q3ZAQ7 101 aa12.42□□□□□ -0.42
CTNNA1-236ENST00000522792 MINOS1Q5TGZ0 78 aa12.42□□□□□ -0.42
CTNNA1-236ENST00000522792 BAP18Q8IXM2 172 aa12.42□□□□□ -0.42
CTNNA1-236ENST00000522792 LRRC75A-AS1Q8N1F1 130 aa12.42□□□□□ -0.42
CTNNA1-236ENST00000522792 SCARB1Q8WTV0 552 aa12.42□□□□□ -0.42
CTNNA1-236ENST00000522792 CFHR4Q92496 578 aa12.42□□□□□ -0.42
CTNNA1-236ENST00000522792 MINOS1-NBL1R4GNA1 71 aa12.42□□□□□ -0.42
CTNNA1-236ENST00000522792 VENTXO95231 258 aa12.42□□□□□ -0.42
CTNNA1-236ENST00000522792 HSPE1P61604 102 aaKnown RBP12.42□□□□□ -0.42
CTNNA1-236ENST00000522792 ARL16Q0P5N6 197 aa12.42□□□□□ -0.42
CTNNA1-236ENST00000522792 HAPLN4Q86UW8 402 aa12.42□□□□□ -0.42
CTNNA1-236ENST00000522792 TMEM167AQ8TBQ9 72 aa12.42□□□□□ -0.42
CTNNA1-236ENST00000522792 CIB3Q96Q77 187 aaPredicted RBP12.42□□□□□ -0.42
CTNNA1-236ENST00000522792 HEYLQ9NQ87 328 aaPredicted RBP12.42□□□□□ -0.42
CTNNA1-236ENST00000522792 WNK2Q9Y3S1 2297 aa12.41□□□□□ -0.42
CTNNA1-236ENST00000522792 ABCA12Q86UK0 2595 aa12.41□□□□□ -0.42
CTNNA1-236ENST00000522792 CENPVL3A0A0U1RRI6 287 aa12.41□□□□□ -0.42
CTNNA1-236ENST00000522792 TEX50A0A1B0GTY4 177 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms