RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 OR4A47Q6IF82 309 aa13.81□□□□□ -0.2
CLK4-211ENST00000522556 TMEM167AQ8TBQ9 72 aa13.81□□□□□ -0.2
CLK4-211ENST00000522556 RCC1LQ96I51 464 aaKnown RBP13.81□□□□□ -0.2
CLK4-211ENST00000522556 PHB2Q99623 299 aa13.81□□□□□ -0.2
CLK4-211ENST00000522556 ZNF355PQ9NSJ1 428 aa13.81□□□□□ -0.2
CLK4-211ENST00000522556 DNAH3Q8TD57 4116 aa13.8□□□□□ -0.2
CLK4-211ENST00000522556 CCDC160A6NGH7 325 aa13.8□□□□□ -0.2
CLK4-211ENST00000522556 CGB1A6NKQ9 187 aa13.8□□□□□ -0.2
CLK4-211ENST00000522556 TEX22C9J3V5 150 aa13.8□□□□□ -0.2
CLK4-211ENST00000522556 RBFOX2O43251 390 aaKnown RBP eCLIP13.8□□□□□ -0.2
CLK4-211ENST00000522556 OR2A4O95047 310 aa13.8□□□□□ -0.2
CLK4-211ENST00000522556 LGALS1P09382 135 aaKnown RBP13.8□□□□□ -0.2
CLK4-211ENST00000522556 SLURP1P55000 103 aa13.8□□□□□ -0.2
CLK4-211ENST00000522556 RUNX1Q01196 453 aa13.8□□□□□ -0.2
CLK4-211ENST00000522556 ZNF585BQ52M93 769 aa13.8□□□□□ -0.2
CLK4-211ENST00000522556 MMD2Q8IY49 270 aa13.8□□□□□ -0.2
CLK4-211ENST00000522556 ADAD2Q8NCV1 583 aaKnown RBP13.8□□□□□ -0.2
CLK4-211ENST00000522556 OR1N2Q8NGR9 330 aa13.8□□□□□ -0.2
CLK4-211ENST00000522556 FCAMRQ8WWV6 532 aa13.8□□□□□ -0.2
CLK4-211ENST00000522556 DIRAS2Q96HU8 199 aa13.8□□□□□ -0.2
CLK4-211ENST00000522556 OR2A7Q96R45 310 aa13.8□□□□□ -0.2
CLK4-211ENST00000522556 NXF2Q9GZY0 626 aaKnown RBP13.8□□□□□ -0.2
CLK4-211ENST00000522556 AURKAIP1Q9NWT8 199 aaPredicted RBP13.8□□□□□ -0.2
CLK4-211ENST00000522556 COA4Q9NYJ1 87 aa13.8□□□□□ -0.2
CLK4-211ENST00000522556 GABARAPH6UMI1 98 aa13.79□□□□□ -0.2
CLK4-211ENST00000522556 GPR31O00270 319 aa13.79□□□□□ -0.2
CLK4-211ENST00000522556 IL6RP08887 468 aaPredicted RBP13.79□□□□□ -0.2
CLK4-211ENST00000522556 PI3P19957 117 aa13.79□□□□□ -0.2
CLK4-211ENST00000522556 ZNF45Q02386 682 aa13.79□□□□□ -0.2
CLK4-211ENST00000522556 IL18Q14116 193 aa13.79□□□□□ -0.2
CLK4-211ENST00000522556 RNASE10Q5GAN6 216 aaKnown RBP13.79□□□□□ -0.2
CLK4-211ENST00000522556 PYHIN1Q6K0P9 492 aa13.79□□□□□ -0.2
CLK4-211ENST00000522556 LHFPL1Q86WI0 220 aa13.79□□□□□ -0.2
CLK4-211ENST00000522556 MCFD2Q8NI22 146 aa13.79□□□□□ -0.2
CLK4-211ENST00000522556 SMIM4Q8WVI0 70 aa13.79□□□□□ -0.2
CLK4-211ENST00000522556 MRGPRFQ96AM1 343 aa13.79□□□□□ -0.2
CLK4-211ENST00000522556 RSRP1Q9BUV0 290 aa13.79□□□□□ -0.2
CLK4-211ENST00000522556 TNFSF8P32971 234 aa13.78□□□□□ -0.2
CLK4-211ENST00000522556 PPP5CP53041 499 aa13.78□□□□□ -0.2
CLK4-211ENST00000522556 ZNF616Q08AN1 781 aa13.78□□□□□ -0.2
CLK4-211ENST00000522556 FYTTD1Q96QD9 318 aaKnown RBP13.78□□□□□ -0.2
CLK4-211ENST00000522556 TMEM140Q9NV12 185 aa13.78□□□□□ -0.2
CLK4-211ENST00000522556 ACTL6BO94805 426 aa13.77□□□□□ -0.21
CLK4-211ENST00000522556 TPPPO94811 219 aa13.77□□□□□ -0.21
CLK4-211ENST00000522556 HPRT1P00492 218 aa13.77□□□□□ -0.21
CLK4-211ENST00000522556 HRASP01112 189 aa13.77□□□□□ -0.21
CLK4-211ENST00000522556 TRBV12-3P01733 135 aa13.77□□□□□ -0.21
CLK4-211ENST00000522556 CD74P04233 296 aa13.77□□□□□ -0.21
CLK4-211ENST00000522556 OR9G9P0C7N8 305 aa13.77□□□□□ -0.21
CLK4-211ENST00000522556 ZNF735P0CB33 412 aa13.77□□□□□ -0.21
CLK4-211ENST00000522556 AREGP15514 252 aa13.77□□□□□ -0.21
CLK4-211ENST00000522556 F2RP25116 425 aa13.77□□□□□ -0.21
CLK4-211ENST00000522556 LPAR6P43657 344 aa13.77□□□□□ -0.21
CLK4-211ENST00000522556 RPL27AP46776 148 aaKnown RBP13.77□□□□□ -0.21
CLK4-211ENST00000522556 TAS2R31P59538 309 aa13.77□□□□□ -0.21
CLK4-211ENST00000522556 POU2AF1Q16633 256 aa13.77□□□□□ -0.21
CLK4-211ENST00000522556 TBC1D26Q86UD7 250 aa13.77□□□□□ -0.21
CLK4-211ENST00000522556 TMEM229BQ8NBD8 167 aa13.77□□□□□ -0.21
CLK4-211ENST00000522556 VSTM2AQ8TAG5 236 aa13.77□□□□□ -0.21
CLK4-211ENST00000522556 DCUN1D4Q92564 292 aa13.77□□□□□ -0.21
CLK4-211ENST00000522556 DLX4Q92988 240 aaPredicted RBP13.77□□□□□ -0.21
CLK4-211ENST00000522556 DGCR14Q96DF8 476 aaKnown RBP13.77□□□□□ -0.21
CLK4-211ENST00000522556 SLA2Q9H6Q3 261 aa13.77□□□□□ -0.21
CLK4-211ENST00000522556 PLEKHA2Q9HB19 425 aa13.77□□□□□ -0.21
CLK4-211ENST00000522556 HRASLSQ9HDD0 168 aa13.77□□□□□ -0.21
CLK4-211ENST00000522556 BET1LQ9NYM9 111 aa13.77□□□□□ -0.21
CLK4-211ENST00000522556 UPK2O00526 184 aa13.76□□□□□ -0.21
CLK4-211ENST00000522556 MPPED1O15442 326 aa13.76□□□□□ -0.21
CLK4-211ENST00000522556 RAB3DO95716 219 aa13.76□□□□□ -0.21
CLK4-211ENST00000522556 IGKV1-39P01597 117 aa13.76□□□□□ -0.21
CLK4-211ENST00000522556 IGKV1D-39P04432 117 aa13.76□□□□□ -0.21
CLK4-211ENST00000522556 REG1AP05451 166 aa13.76□□□□□ -0.21
CLK4-211ENST00000522556 NQO2P16083 231 aa13.76□□□□□ -0.21
CLK4-211ENST00000522556 G6PCP35575 357 aa13.76□□□□□ -0.21
CLK4-211ENST00000522556 RPL8P62917 257 aaKnown RBP13.76□□□□□ -0.21
CLK4-211ENST00000522556 SOSTQ9BQB4 213 aa13.76□□□□□ -0.21
CLK4-211ENST00000522556 SLC2A9Q9NRM0 540 aa13.76□□□□□ -0.21
CLK4-211ENST00000522556 RSL24D1Q9UHA3 163 aaKnown RBP13.76□□□□□ -0.21
CLK4-211ENST00000522556 ANKRD34BA5PLL1 514 aa13.75□□□□□ -0.21
CLK4-211ENST00000522556 H3BUA1 57 aa13.75□□□□□ -0.21
CLK4-211ENST00000522556 CREBL2O60519 120 aaPredicted RBP13.75□□□□□ -0.21
CLK4-211ENST00000522556 OR8U8P0C7N1 319 aa13.75□□□□□ -0.21
CLK4-211ENST00000522556 PGAM2P15259 253 aa13.75□□□□□ -0.21
CLK4-211ENST00000522556 HLA-GP17693 338 aa13.75□□□□□ -0.21
CLK4-211ENST00000522556 UCP3P55916 312 aa13.75□□□□□ -0.21
CLK4-211ENST00000522556 TAS2R19P59542 299 aa13.75□□□□□ -0.21
CLK4-211ENST00000522556 EGFEM1PQ0D2K5 195 aa13.75□□□□□ -0.21
CLK4-211ENST00000522556 STEAP1BQ6NZ63 245 aa13.75□□□□□ -0.21
CLK4-211ENST00000522556 CMTM1Q8IZ96 169 aa13.75□□□□□ -0.21
CLK4-211ENST00000522556 SLC38A6Q8IZM9 456 aa13.75□□□□□ -0.21
CLK4-211ENST00000522556 DMBX1Q8NFW5 382 aa13.75□□□□□ -0.21
CLK4-211ENST00000522556 BORCS5Q969J3 196 aa13.75□□□□□ -0.21
CLK4-211ENST00000522556 TMEM68Q96MH6 324 aa13.75□□□□□ -0.21
CLK4-211ENST00000522556 SPIN2AQ99865 258 aa13.75□□□□□ -0.21
CLK4-211ENST00000522556 SPIN2BQ9BPZ2 258 aa13.75□□□□□ -0.21
CLK4-211ENST00000522556 COMMD9Q9P000 198 aa13.75□□□□□ -0.21
CLK4-211ENST00000522556 NSG2Q9Y328 171 aa13.75□□□□□ -0.21
CLK4-211ENST00000522556 WI2-2373I1.2A0A1W2PRP0 233 aa13.74□□□□□ -0.21
CLK4-211ENST00000522556 MARCH11A6NNE9 402 aa13.74□□□□□ -0.21
CLK4-211ENST00000522556 SEC14L6B5MCN3 397 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms