RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 OR4C12Q96R67 309 aa8.21□□□□□ -1.1
SPARC-202ENST00000520687 C12orf57Q99622 126 aa8.21□□□□□ -1.1
SPARC-202ENST00000520687 HEATR1Q9H583 2144 aaKnown RBP8.21□□□□□ -1.1
SPARC-202ENST00000520687 TUBA4BQ9H853 241 aa8.21□□□□□ -1.1
SPARC-202ENST00000520687 TMEM106BQ9NUM4 274 aa8.21□□□□□ -1.1
SPARC-202ENST00000520687 PRRC2CQ9Y520 2896 aaKnown RBP8.2□□□□□ -1.1
SPARC-202ENST00000520687 NIPBLQ6KC79 2804 aaeCLIP8.2□□□□□ -1.1
SPARC-202ENST00000520687 SHISA9B4DS77 424 aa8.2□□□□□ -1.1
SPARC-202ENST00000520687 TNFRSF13BO14836 293 aaPredicted RBP8.2□□□□□ -1.1
SPARC-202ENST00000520687 NDUFB3O43676 98 aa8.2□□□□□ -1.1
SPARC-202ENST00000520687 PROP1O75360 226 aa8.2□□□□□ -1.1
SPARC-202ENST00000520687 IFNA17P01571 189 aa8.2□□□□□ -1.1
SPARC-202ENST00000520687 FHITP49789 147 aa8.2□□□□□ -1.1
SPARC-202ENST00000520687 PPT1P50897 306 aa8.2□□□□□ -1.1
SPARC-202ENST00000520687 CCL8P80075 99 aa8.2□□□□□ -1.1
SPARC-202ENST00000520687 RHEBQ15382 184 aa8.2□□□□□ -1.1
SPARC-202ENST00000520687 LTC4SQ16873 150 aa8.2□□□□□ -1.1
SPARC-202ENST00000520687 RTL8BQ17RB0 113 aa8.2□□□□□ -1.1
SPARC-202ENST00000520687 RNF212Q495C1 297 aa8.2□□□□□ -1.1
SPARC-202ENST00000520687 OR2B11Q5JQS5 317 aa8.2□□□□□ -1.1
SPARC-202ENST00000520687 SOHLH1Q5JUK2 328 aa8.2□□□□□ -1.1
SPARC-202ENST00000520687 HEPN1Q6WQI6 88 aa8.2□□□□□ -1.1
SPARC-202ENST00000520687 HAPLN4Q86UW8 402 aa8.2□□□□□ -1.1
SPARC-202ENST00000520687 ZNF709Q8N972 641 aa8.2□□□□□ -1.1
SPARC-202ENST00000520687 DEFB108BQ8NET1 73 aa8.2□□□□□ -1.1
SPARC-202ENST00000520687 DYNLRB1Q9NP97 96 aa8.2□□□□□ -1.1
SPARC-202ENST00000520687 KCNIP2Q9NS61 270 aa8.2□□□□□ -1.1
SPARC-202ENST00000520687 FKBP11Q9NYL4 201 aa8.2□□□□□ -1.1
SPARC-202ENST00000520687 SLC25A10Q9UBX3 287 aaPredicted RBP8.2□□□□□ -1.1
SPARC-202ENST00000520687 PCP4L1A6NKN8 68 aa8.19□□□□□ -1.1
SPARC-202ENST00000520687 C9JQL5 133 aa8.19□□□□□ -1.1
SPARC-202ENST00000520687 GPR37O15354 613 aa8.19□□□□□ -1.1
SPARC-202ENST00000520687 ARG1P05089 322 aa8.19□□□□□ -1.1
SPARC-202ENST00000520687 NDUFB7P17568 137 aa8.19□□□□□ -1.1
SPARC-202ENST00000520687 NFYBP25208 207 aa8.19□□□□□ -1.1
SPARC-202ENST00000520687 AKR1D1P51857 326 aa8.19□□□□□ -1.1
SPARC-202ENST00000520687 ZNF134P52741 427 aa8.19□□□□□ -1.1
SPARC-202ENST00000520687 RAB5BP61020 215 aa8.19□□□□□ -1.1
SPARC-202ENST00000520687 RAB11AP62491 216 aa8.19□□□□□ -1.1
SPARC-202ENST00000520687 RPL31P62899 125 aaKnown RBP8.19□□□□□ -1.1
SPARC-202ENST00000520687 HOXA4Q00056 320 aaPredicted RBP8.19□□□□□ -1.1
SPARC-202ENST00000520687 ARL16Q0P5N6 197 aa8.19□□□□□ -1.1
SPARC-202ENST00000520687 HABP2Q14520 560 aaPredicted RBP8.19□□□□□ -1.1
SPARC-202ENST00000520687 RBMS3Q6XE24 437 aaKnown RBP8.19□□□□□ -1.1
SPARC-202ENST00000520687 LINC00311Q8N616 119 aa8.19□□□□□ -1.1
SPARC-202ENST00000520687 P2RX4Q99571 388 aa8.19□□□□□ -1.1
SPARC-202ENST00000520687 SH3BGRL2Q9UJC5 107 aa8.19□□□□□ -1.1
SPARC-202ENST00000520687 PRNDQ9UKY0 176 aa8.19□□□□□ -1.1
SPARC-202ENST00000520687 FOXA2Q9Y261 457 aaPredicted RBP8.19□□□□□ -1.1
SPARC-202ENST00000520687 ZNF257Q9Y2Q1 563 aa8.19□□□□□ -1.1
SPARC-202ENST00000520687 TRBV23-1A0A0A0MS06 115 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 PMS2P5A8MQ11 134 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 E7EQL1 145 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 FNDC10F2Z333 226 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 TMPRSS2O15393 492 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 HSPE1P61604 102 aaKnown RBP8.18□□□□□ -1.1
SPARC-202ENST00000520687 RUNX1Q01196 453 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 RELBQ01201 579 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 PRR30Q53SZ7 412 aaPredicted RBP8.18□□□□□ -1.1
SPARC-202ENST00000520687 FAM201AQ5SY85 155 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 ADAM5Q6NVV9 412 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 FAM216BQ8N7L0 139 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 CLDND2Q8NHS1 167 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 ZNF596Q8TC21 504 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 PLPPR2Q96GM1 343 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 ZNF714Q96N38 554 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 QTRT1Q9BXR0 403 aaKnown RBP8.18□□□□□ -1.1
SPARC-202ENST00000520687 RPRMQ9NS64 109 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 RP1L1Q8IWN7 2480 aaPredicted RBP8.18□□□□□ -1.1
SPARC-202ENST00000520687 SAA2-SAA4A0A096LPE2 208 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 A0A1W2PPH5 198 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 SAA2P0DJI9 122 aaPredicted RBP8.18□□□□□ -1.1
SPARC-202ENST00000520687 MDKP21741 143 aaPredicted RBP8.18□□□□□ -1.1
SPARC-202ENST00000520687 OR2B8PP59922 312 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 DLK1P80370 383 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 TMEM249Q2WGJ8 235 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 RPL39P5Q59GN2 51 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 OR8G2PQ6IF36 304 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 FAM53AQ6NSI3 398 aaPredicted RBP8.18□□□□□ -1.1
SPARC-202ENST00000520687 ZNF833PQ6ZTB9 187 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 TCF23Q7RTU1 214 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 DMRTC2Q8IXT2 367 aaPredicted RBP8.18□□□□□ -1.1
SPARC-202ENST00000520687 LYG1Q8N1E2 194 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 OSR1Q8TAX0 266 aaPredicted RBP8.18□□□□□ -1.1
SPARC-202ENST00000520687 HIST1H2BAQ96A08 127 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 RHOVQ96L33 236 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 ACTR3CQ9C0K3 210 aaPredicted RBP8.18□□□□□ -1.1
SPARC-202ENST00000520687 ENY2Q9NPA8 101 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 HEYLQ9NQ87 328 aaPredicted RBP8.18□□□□□ -1.1
SPARC-202ENST00000520687 TMEM14BQ9NUH8 114 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 SLC39A9Q9NUM3 307 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 TMEM140Q9NV12 185 aa8.18□□□□□ -1.1
SPARC-202ENST00000520687 CISD1Q9NZ45 108 aaKnown RBP8.18□□□□□ -1.1
SPARC-202ENST00000520687 IGHV1-69-2A0A0G2JMI3 117 aa8.17□□□□□ -1.1
SPARC-202ENST00000520687 CTXND1A0A1B0GTU2 59 aa8.17□□□□□ -1.1
SPARC-202ENST00000520687 UBE2L5PA0A1B0GUS4 154 aa8.17□□□□□ -1.1
SPARC-202ENST00000520687 LOC102723971A0A1B0GUV8 181 aa8.17□□□□□ -1.1
SPARC-202ENST00000520687 C15orf61A6NNL5 157 aa8.17□□□□□ -1.1
SPARC-202ENST00000520687 C1orf196B1AJZ1 125 aa8.17□□□□□ -1.1
SPARC-202ENST00000520687 B4DEV8 164 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms