RNA–Protein interactions for RNA: ENST00000520619.1

SNHG6-202, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 3 BASIC

Gene SNHG6, Length 479 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-202ENST00000520619 C7orf65Q6ZTY9 151 aa0.48□□□□□ -2.33
SNHG6-202ENST00000520619 UBL4BQ8N7F7 174 aa0.48□□□□□ -2.33
SNHG6-202ENST00000520619 C15orf53Q8NAA6 179 aa0.48□□□□□ -2.33
SNHG6-202ENST00000520619 SGMS2Q8NHU3 365 aa0.48□□□□□ -2.33
SNHG6-202ENST00000520619 EEF1AKMT1Q8WVE0 214 aa0.48□□□□□ -2.33
SNHG6-202ENST00000520619 MBD3L1Q8WWY6 194 aa0.48□□□□□ -2.33
SNHG6-202ENST00000520619 ANKRD36BP1Q96IX9 119 aa0.48□□□□□ -2.33
SNHG6-202ENST00000520619 CHST6Q9GZX3 395 aa0.48□□□□□ -2.33
SNHG6-202ENST00000520619 CHMP4BQ9H444 224 aaKnown RBP0.48□□□□□ -2.33
SNHG6-202ENST00000520619 XAGE1AQ9HD64 81 aa0.48□□□□□ -2.33
SNHG6-202ENST00000520619 HRASLSQ9HDD0 168 aa0.48□□□□□ -2.33
SNHG6-202ENST00000520619 SPANXB1Q9NS25 103 aaPredicted RBP0.48□□□□□ -2.33
SNHG6-202ENST00000520619 ZNHIT6Q9NWK9 470 aaKnown RBP0.48□□□□□ -2.33
SNHG6-202ENST00000520619 COQ4Q9Y3A0 265 aa0.48□□□□□ -2.33
SNHG6-202ENST00000520619 C22orf24Q9Y442 160 aa0.48□□□□□ -2.33
SNHG6-202ENST00000520619 PTPRBP23467 1997 aa0.47□□□□□ -2.33
SNHG6-202ENST00000520619 F5H768 121 aa0.47□□□□□ -2.33
SNHG6-202ENST00000520619 H3BT86 120 aa0.47□□□□□ -2.33
SNHG6-202ENST00000520619 COX7A2LO14548 114 aa0.47□□□□□ -2.33
SNHG6-202ENST00000520619 CALUO43852 315 aaPredicted RBP0.47□□□□□ -2.33
SNHG6-202ENST00000520619 NSA2O95478 260 aaKnown RBP0.47□□□□□ -2.33
SNHG6-202ENST00000520619 RPSAP08865 295 aaKnown RBP0.47□□□□□ -2.33
SNHG6-202ENST00000520619 TFPTP0C1Z6 253 aa0.47□□□□□ -2.33
SNHG6-202ENST00000520619 CCL1P22362 96 aa0.47□□□□□ -2.33
SNHG6-202ENST00000520619 CD40LGP29965 261 aa0.47□□□□□ -2.33
SNHG6-202ENST00000520619 SLCO1A2P46721 670 aa0.47□□□□□ -2.33
SNHG6-202ENST00000520619 EVX1P49640 407 aa0.47□□□□□ -2.33
SNHG6-202ENST00000520619 UBE2G2P60604 165 aa0.47□□□□□ -2.33
SNHG6-202ENST00000520619 AP1S1P61966 158 aa0.47□□□□□ -2.33
SNHG6-202ENST00000520619 TNFAIP6P98066 277 aaPredicted RBP0.47□□□□□ -2.33
SNHG6-202ENST00000520619 AKR1C1Q04828 323 aa0.47□□□□□ -2.33
SNHG6-202ENST00000520619 ARHGAP11BQ3KRB8 267 aa0.47□□□□□ -2.33
SNHG6-202ENST00000520619 TNFAIP8L3Q5GJ75 292 aa0.47□□□□□ -2.33
SNHG6-202ENST00000520619 C1orf194Q5T5A4 169 aa0.47□□□□□ -2.33
SNHG6-202ENST00000520619 ZNF705AQ6ZN79 300 aaPredicted RBP0.47□□□□□ -2.33
SNHG6-202ENST00000520619 SLC36A1Q7Z2H8 476 aa0.47□□□□□ -2.33
SNHG6-202ENST00000520619 FUNDC1Q8IVP5 155 aa0.47□□□□□ -2.33
SNHG6-202ENST00000520619 UMODL1-AS1Q8N2C9 162 aa0.47□□□□□ -2.33
SNHG6-202ENST00000520619 JOSD2Q8TAC2 188 aa0.47□□□□□ -2.33
SNHG6-202ENST00000520619 C12orf43Q96C57 262 aaKnown RBP0.47□□□□□ -2.33
SNHG6-202ENST00000520619 DHRS9Q9BPW9 319 aa0.47□□□□□ -2.33
SNHG6-202ENST00000520619 ANAPC10Q9UM13 185 aa0.47□□□□□ -2.33
SNHG6-202ENST00000520619 PRELID1Q9Y255 219 aa0.47□□□□□ -2.33
SNHG6-202ENST00000520619 TIMM9Q9Y5J7 89 aa0.47□□□□□ -2.33
SNHG6-202ENST00000520619 GMEB1Q9Y692 573 aa0.47□□□□□ -2.33
SNHG6-202ENST00000520619 COL4A5P29400 1685 aa0.46□□□□□ -2.34
SNHG6-202ENST00000520619 TRAV38-1A0A0B4J264 116 aa0.46□□□□□ -2.34
SNHG6-202ENST00000520619 IGKV1-9A0A0C4DH69 117 aa0.46□□□□□ -2.34
SNHG6-202ENST00000520619 MEIS3P1A6NDR6 274 aa0.46□□□□□ -2.34
SNHG6-202ENST00000520619 IBA57-AS1B1ANH7 110 aa0.46□□□□□ -2.34
SNHG6-202ENST00000520619 LST1O00453 97 aa0.46□□□□□ -2.34
SNHG6-202ENST00000520619 COCHO43405 550 aa0.46□□□□□ -2.34
SNHG6-202ENST00000520619 CREBL2O60519 120 aaPredicted RBP0.46□□□□□ -2.34
SNHG6-202ENST00000520619 MSMBP08118 114 aa0.46□□□□□ -2.34
SNHG6-202ENST00000520619 OCMP0CE72 109 aaPredicted RBP0.46□□□□□ -2.34
SNHG6-202ENST00000520619 UGT2B7P16662 529 aa0.46□□□□□ -2.34
SNHG6-202ENST00000520619 HIST1H4AP62805 103 aaKnown RBP0.46□□□□□ -2.34
SNHG6-202ENST00000520619 RPS19BP1Q86WX3 136 aaKnown RBP0.46□□□□□ -2.34
SNHG6-202ENST00000520619 Q8N402 240 aa0.46□□□□□ -2.34
SNHG6-202ENST00000520619 SLC22A24Q8N4F4 322 aa0.46□□□□□ -2.34
SNHG6-202ENST00000520619 RPP25LQ8N5L8 163 aaKnown RBP0.46□□□□□ -2.34
SNHG6-202ENST00000520619 TMEM161BQ8NDZ6 487 aa0.46□□□□□ -2.34
SNHG6-202ENST00000520619 OR2T27Q8NH04 317 aa0.46□□□□□ -2.34
SNHG6-202ENST00000520619 TMA16Q96EY4 203 aaKnown RBP0.46□□□□□ -2.34
SNHG6-202ENST00000520619 KCTD7Q96MP8 289 aa0.46□□□□□ -2.34
SNHG6-202ENST00000520619 NDEL1Q9GZM8 345 aa0.46□□□□□ -2.34
SNHG6-202ENST00000520619 LHFPL6Q9Y693 200 aa0.46□□□□□ -2.34
SNHG6-202ENST00000520619 MYH11P35749 1972 aa0.46□□□□□ -2.34
SNHG6-202ENST00000520619 DLG5Q8TDM6 1919 aa0.46□□□□□ -2.34
SNHG6-202ENST00000520619 ITGB1BP1O14713 200 aa0.45□□□□□ -2.34
SNHG6-202ENST00000520619 C8orf88P0DMB2 117 aa0.45□□□□□ -2.34
SNHG6-202ENST00000520619 RPL30P62888 115 aaKnown RBP0.45□□□□□ -2.34
SNHG6-202ENST00000520619 TMED1Q13445 227 aa0.45□□□□□ -2.34
SNHG6-202ENST00000520619 ELOBQ15370 118 aa0.45□□□□□ -2.34
SNHG6-202ENST00000520619 FAM27BQ5VT28 67 aa0.45□□□□□ -2.34
SNHG6-202ENST00000520619 FAM78BQ5VT40 261 aa0.45□□□□□ -2.34
SNHG6-202ENST00000520619 FAM173BQ6P4H8 233 aa0.45□□□□□ -2.34
SNHG6-202ENST00000520619 TNFAIP8L2Q6P589 184 aaPredicted RBP0.45□□□□□ -2.34
SNHG6-202ENST00000520619 GID4Q8IVV7 300 aa0.45□□□□□ -2.34
SNHG6-202ENST00000520619 TMEM251Q8N6I4 163 aa0.45□□□□□ -2.34
SNHG6-202ENST00000520619 ATP6V1G3Q96LB4 118 aa0.45□□□□□ -2.34
SNHG6-202ENST00000520619 DCUN1D5Q9BTE7 237 aa0.45□□□□□ -2.34
SNHG6-202ENST00000520619 OR8D2Q9GZM6 311 aa0.45□□□□□ -2.34
SNHG6-202ENST00000520619 POLR1DQ9Y2S0 133 aa0.45□□□□□ -2.34
SNHG6-202ENST00000520619 KIF24Q5T7B8 1368 aa0.45□□□□□ -2.34
SNHG6-202ENST00000520619 TONSLQ96HA7 1378 aa0.45□□□□□ -2.34
SNHG6-202ENST00000520619 TMEM269A0A1B0GVZ9 245 aa0.44□□□□□ -2.34
SNHG6-202ENST00000520619 OR4C45A6NMZ5 311 aa0.44□□□□□ -2.34
SNHG6-202ENST00000520619 LEPROTO15243 131 aa0.44□□□□□ -2.34
SNHG6-202ENST00000520619 PPBPP02775 128 aa0.44□□□□□ -2.34
SNHG6-202ENST00000520619 REG1AP05451 166 aa0.44□□□□□ -2.34
SNHG6-202ENST00000520619 IL3P08700 152 aa0.44□□□□□ -2.34
SNHG6-202ENST00000520619 KRT7P08729 469 aa0.44□□□□□ -2.34
SNHG6-202ENST00000520619 CDC34P49427 236 aaPredicted RBP0.44□□□□□ -2.34
SNHG6-202ENST00000520619 POLR2GP62487 172 aaKnown RBP eCLIP0.44□□□□□ -2.34
SNHG6-202ENST00000520619 EMX1Q04741 257 aaPredicted RBP0.44□□□□□ -2.34
SNHG6-202ENST00000520619 PPP1R1AQ13522 171 aa0.44□□□□□ -2.34
SNHG6-202ENST00000520619 C5orf46Q6UWT4 87 aa0.44□□□□□ -2.34
SNHG6-202ENST00000520619 PLEKHG7Q6ZR37 379 aa0.44□□□□□ -2.34
SNHG6-202ENST00000520619 SSX8Q7RTT4 187 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms