RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 CHRNA10Q9GZZ6 450 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 MBNL3Q9NUK0 354 aaKnown RBP8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 CRIM1Q9NZV1 1036 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 ARL2-SNX15V9GYD0 113 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 MUC3AQ02505 3323 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 IGHV3-43A0A0B4J1X8 118 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 MUC21A0A0G2JKD1 596 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 MUC21A0A140T8X8 626 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 SYNGR1O43759 233 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 RHBDL1O75783 438 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 IGHV3-43DP0DP04 118 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 F2RP25116 425 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 GNB1P62873 340 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 RSPO1Q2MKA7 263 aaPredicted RBP8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 ANXA2RQ3ZCQ2 193 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 MUC21Q5SSG8 566 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 Q6ZS52 159 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 RFESDQ8TAC1 157 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 BORCS7Q96B45 105 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 GP6Q9HCN6 339 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 DYSFO75923 2080 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 J3QR89 54 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 PMCHL1Q16048 86 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 NMSQ5H8A3 153 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 C20orf204Q6ZNR8 217 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 OR10G8Q8NGN5 311 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 OXGR1Q96P68 337 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 PIMREGQ9BSJ6 248 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 FGF21Q9NSA1 209 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 B4GALT7Q9UBV7 327 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 TRAV8-6A0A0B4J262 113 aa8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 FOXI3A8MTJ6 420 aaPredicted RBP8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 ZG16O60844 167 aa8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 SCGB1A1P11684 91 aa8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 RBM11P57052 281 aaKnown RBP8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 MORN2Q502X0 79 aa8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 TRAT1Q6PIZ9 186 aa8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 ZNF841Q6ZN19 808 aa8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 MTURNQ8N3F0 131 aa8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 SGK494Q96LW2 274 aa8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 OR2V2Q96R30 315 aa8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 SSBP3Q9BWW4 388 aaPredicted RBP8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 DEFB126Q9BYW3 111 aa8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 PEF1Q9UBV8 284 aaKnown RBP8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 TRAPPC2LQ9UL33 140 aa8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 CELA3AP09093 270 aa8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 RHOGP84095 191 aa8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 DOLPP1Q86YN1 238 aa8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 OR4A5Q8NH83 315 aa8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 PERPQ96FX8 193 aa8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 HS3ST3A1Q9Y663 406 aa8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 IGKV1-6A0A0C4DH72 117 aa8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 GAGE12HA6NDE8 117 aa8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 ADH4P08319 380 aa8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 CFHR2P36980 270 aa8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 TPRX1Q8N7U7 411 aa8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 ST8SIA1Q92185 356 aa8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 RCHY1Q96PM5 261 aa8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 CDC42EP3Q9UKI2 254 aa8.53□□□□□ -1.04
PDGFRB-207ENST00000520579 CADP27708 2225 aa8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 M0QXV9 152 aa8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 ETV2O00321 342 aaPredicted RBP8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 SRIP30626 198 aa8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 PSG4Q00888 419 aa8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 SPATA31B1PQ5VZV4 182 aa8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 OR1L1Q8NH94 360 aa8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 RAB37Q96AX2 223 aa8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 RAB40CQ96S21 281 aa8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 IGHMP01871 453 aa8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 COX5AP20674 150 aa8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 NPY1RP25929 384 aa8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 SRP14P37108 136 aaKnown RBP8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 GPR6P46095 362 aaPredicted RBP8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 CAMPP49913 170 aa8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 MNX1P50219 401 aaPredicted RBP8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 LRRC10Q5BKY1 277 aa8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 STUMQ69YW2 141 aa8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 RNASEKQ6P5S7 137 aaKnown RBP8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 OCC1Q8TAD7 63 aa8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 APOBEC3DQ96AK3 386 aaPredicted RBP8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 CLDN23Q96B33 292 aa8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 GNB4Q9HAV0 340 aa8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 LRRC75BQ2VPJ9 315 aa8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 CEACAM16Q2WEN9 425 aa8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 CXorf67Q86X51 503 aaPredicted RBP8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 LRTM2Q8N967 370 aa8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 ANAPC16Q96DE5 110 aa8.52□□□□□ -1.05
PDGFRB-207ENST00000520579 ADAMTS9Q9P2N4 1935 aa8.51□□□□□ -1.05
PDGFRB-207ENST00000520579 DPRXA6NFQ7 191 aa8.51□□□□□ -1.05
PDGFRB-207ENST00000520579 TAX1BP3O14907 124 aa8.51□□□□□ -1.05
PDGFRB-207ENST00000520579 IGKV1-5P01602 117 aa8.51□□□□□ -1.05
PDGFRB-207ENST00000520579 CD24P25063 80 aa8.51□□□□□ -1.05
PDGFRB-207ENST00000520579 TGIF2LYQ8IUE0 185 aa8.51□□□□□ -1.05
PDGFRB-207ENST00000520579 ZNF295-AS1Q8N0V1 137 aa8.51□□□□□ -1.05
PDGFRB-207ENST00000520579 OR10P1Q8NGE3 313 aa8.51□□□□□ -1.05
PDGFRB-207ENST00000520579 PPP1R35Q8TAP8 253 aa8.51□□□□□ -1.05
PDGFRB-207ENST00000520579 RNASE7Q9H1E1 156 aaKnown RBP8.51□□□□□ -1.05
PDGFRB-207ENST00000520579 IL23AQ9NPF7 189 aa8.51□□□□□ -1.05
PDGFRB-207ENST00000520579 TMEM242Q9NWH2 141 aa8.51□□□□□ -1.05
PDGFRB-207ENST00000520579 PSG8Q9UQ74 426 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms