RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 RND3P61587 244 aa9.29□□□□□ -0.92
HPS4-218ENST00000519774 SSBP2P81877 361 aaPredicted RBP9.29□□□□□ -0.92
HPS4-218ENST00000519774 CFHR3Q02985 330 aa9.29□□□□□ -0.92
HPS4-218ENST00000519774 BAK1Q16611 211 aa9.29□□□□□ -0.92
HPS4-218ENST00000519774 MRGPRG-AS1Q2M3A8 158 aa9.29□□□□□ -0.92
HPS4-218ENST00000519774 CXorf66Q5JRM2 361 aaPredicted RBP9.29□□□□□ -0.92
HPS4-218ENST00000519774 OR4A47Q6IF82 309 aa9.29□□□□□ -0.92
HPS4-218ENST00000519774 TEX38Q6PEX7 206 aa9.29□□□□□ -0.92
HPS4-218ENST00000519774 NDUFA11Q86Y39 141 aa9.29□□□□□ -0.92
HPS4-218ENST00000519774 MMD2Q8IY49 270 aa9.29□□□□□ -0.92
HPS4-218ENST00000519774 PUSL1Q8N0Z8 303 aaKnown RBP9.29□□□□□ -0.92
HPS4-218ENST00000519774 LINC00528Q8N1L1 170 aa9.29□□□□□ -0.92
HPS4-218ENST00000519774 COMMD1Q8N668 190 aa9.29□□□□□ -0.92
HPS4-218ENST00000519774 TCTEX1D1Q8N7M0 179 aa9.29□□□□□ -0.92
HPS4-218ENST00000519774 GDPD1Q8N9F7 314 aa9.29□□□□□ -0.92
HPS4-218ENST00000519774 CCDC71LQ8N9Z2 235 aa9.29□□□□□ -0.92
HPS4-218ENST00000519774 LFNGQ8NES3 379 aa9.29□□□□□ -0.92
HPS4-218ENST00000519774 DMBX1Q8NFW5 382 aa9.29□□□□□ -0.92
HPS4-218ENST00000519774 R3HDM4Q96D70 268 aa9.29□□□□□ -0.92
HPS4-218ENST00000519774 OR2A7Q96R45 310 aa9.29□□□□□ -0.92
HPS4-218ENST00000519774 PHB2Q99623 299 aa9.29□□□□□ -0.92
HPS4-218ENST00000519774 PLEKHA2Q9HB19 425 aa9.29□□□□□ -0.92
HPS4-218ENST00000519774 HRASLSQ9HDD0 168 aa9.29□□□□□ -0.92
HPS4-218ENST00000519774 PTTG2Q9NZH5 202 aa9.29□□□□□ -0.92
HPS4-218ENST00000519774 COMMD9Q9P000 198 aa9.29□□□□□ -0.92
HPS4-218ENST00000519774 C14orf166Q9Y224 244 aaKnown RBP9.29□□□□□ -0.92
HPS4-218ENST00000519774 TSSC4Q9Y5U2 329 aaPredicted RBP9.29□□□□□ -0.92
HPS4-218ENST00000519774 LINC00854A0A1B0GVQ3 168 aa9.28□□□□□ -0.92
HPS4-218ENST00000519774 ADARB2-AS1A8MUL3 147 aa9.28□□□□□ -0.92
HPS4-218ENST00000519774 NUDT19A8MXV4 375 aa9.28□□□□□ -0.92
HPS4-218ENST00000519774 MPPED1O15442 326 aa9.28□□□□□ -0.92
HPS4-218ENST00000519774 RPLP1P05386 114 aaKnown RBP9.28□□□□□ -0.92
HPS4-218ENST00000519774 APELAP0DMC3 54 aa9.28□□□□□ -0.92
HPS4-218ENST00000519774 PF4V1P10720 104 aa9.28□□□□□ -0.92
HPS4-218ENST00000519774 EGR2P11161 476 aaPredicted RBP9.28□□□□□ -0.92
HPS4-218ENST00000519774 ECI1P42126 302 aa9.28□□□□□ -0.92
HPS4-218ENST00000519774 CRIP2P52943 208 aaPredicted RBP9.28□□□□□ -0.92
HPS4-218ENST00000519774 ZNF45Q02386 682 aa9.28□□□□□ -0.92
HPS4-218ENST00000519774 TMEM267Q0VDI3 215 aaPredicted RBP9.28□□□□□ -0.92
HPS4-218ENST00000519774 FOXE3Q13461 319 aa9.28□□□□□ -0.92
HPS4-218ENST00000519774 SURF2Q15527 256 aaPredicted RBP9.28□□□□□ -0.92
HPS4-218ENST00000519774 ZNF585BQ52M93 769 aa9.28□□□□□ -0.92
HPS4-218ENST00000519774 C10orf55Q5SWW7 151 aa9.28□□□□□ -0.92
HPS4-218ENST00000519774 FAM110DQ8TAY7 271 aaPredicted RBP9.28□□□□□ -0.92
HPS4-218ENST00000519774 TMEM167AQ8TBQ9 72 aa9.28□□□□□ -0.92
HPS4-218ENST00000519774 SRSF12Q8WXF0 261 aaKnown RBP9.28□□□□□ -0.92
HPS4-218ENST00000519774 SDHCQ99643 169 aaPredicted RBP9.28□□□□□ -0.92
HPS4-218ENST00000519774 AIFM2Q9BRQ8 373 aa9.28□□□□□ -0.92
HPS4-218ENST00000519774 TMEM140Q9NV12 185 aa9.28□□□□□ -0.92
HPS4-218ENST00000519774 SLC2A8Q9NY64 477 aa9.28□□□□□ -0.92
HPS4-218ENST00000519774 FOXA2Q9Y261 457 aaPredicted RBP9.28□□□□□ -0.92
HPS4-218ENST00000519774 NUBP2Q9Y5Y2 271 aa9.28□□□□□ -0.92
HPS4-218ENST00000519774 TNCP24821 2201 aa9.28□□□□□ -0.92
HPS4-218ENST00000519774 DNHD1Q96M86 4753 aa9.28□□□□□ -0.92
HPS4-218ENST00000519774 MARCH11A6NNE9 402 aa9.27□□□□□ -0.93
HPS4-218ENST00000519774 H0Y980 276 aa9.27□□□□□ -0.93
HPS4-218ENST00000519774 KRASP01116 189 aa9.27□□□□□ -0.93
HPS4-218ENST00000519774 IGHG4P01861 327 aa9.27□□□□□ -0.93
HPS4-218ENST00000519774 SERPINE2P07093 398 aa9.27□□□□□ -0.93
HPS4-218ENST00000519774 ELANEP08246 267 aa9.27□□□□□ -0.93
HPS4-218ENST00000519774 PPIFP30405 207 aaKnown RBP9.27□□□□□ -0.93
HPS4-218ENST00000519774 G6PCP35575 357 aa9.27□□□□□ -0.93
HPS4-218ENST00000519774 RPL23AP62750 156 aaKnown RBP9.27□□□□□ -0.93
HPS4-218ENST00000519774 RPL8P62917 257 aaKnown RBP9.27□□□□□ -0.93
HPS4-218ENST00000519774 C19orf54Q5BKX5 351 aa9.27□□□□□ -0.93
HPS4-218ENST00000519774 TMEM65Q6PI78 240 aa9.27□□□□□ -0.93
HPS4-218ENST00000519774 CASTOR1Q8WTX7 329 aa9.27□□□□□ -0.93
HPS4-218ENST00000519774 C5orf66Q9H5L9 145 aa9.27□□□□□ -0.93
HPS4-218ENST00000519774 AKIP1Q9NQ31 210 aa9.27□□□□□ -0.93
HPS4-218ENST00000519774 BET1LQ9NYM9 111 aa9.27□□□□□ -0.93
HPS4-218ENST00000519774 TRAV3A0A0B4J244 114 aa9.26□□□□□ -0.93
HPS4-218ENST00000519774 TEX13DA0A0J9YY54 714 aaPredicted RBP9.26□□□□□ -0.93
HPS4-218ENST00000519774 C3orf85A0A1B0GTC6 90 aa9.26□□□□□ -0.93
HPS4-218ENST00000519774 MSGN1A6NI15 193 aa9.26□□□□□ -0.93
HPS4-218ENST00000519774 SOX15O60248 233 aa9.26□□□□□ -0.93
HPS4-218ENST00000519774 IL7P13232 177 aa9.26□□□□□ -0.93
HPS4-218ENST00000519774 MYOD1P15172 320 aa9.26□□□□□ -0.93
HPS4-218ENST00000519774 RPL27AP46776 148 aaKnown RBP9.26□□□□□ -0.93
HPS4-218ENST00000519774 POU2AF1Q16633 256 aa9.26□□□□□ -0.93
HPS4-218ENST00000519774 TRIM16LQ309B1 348 aa9.26□□□□□ -0.93
HPS4-218ENST00000519774 SP6Q3SY56 376 aa9.26□□□□□ -0.93
HPS4-218ENST00000519774 AKIRIN2Q53H80 203 aa9.26□□□□□ -0.93
HPS4-218ENST00000519774 PRR31Q5SQ13 230 aa9.26□□□□□ -0.93
HPS4-218ENST00000519774 C18orf65Q6ZTR6 163 aa9.26□□□□□ -0.93
HPS4-218ENST00000519774 MINDY2Q8NBR6 621 aa9.26□□□□□ -0.93
HPS4-218ENST00000519774 KLHL30-AS1Q8NEE0 82 aa9.26□□□□□ -0.93
HPS4-218ENST00000519774 OR5T1Q8NG75 326 aa9.26□□□□□ -0.93
HPS4-218ENST00000519774 OR4A5Q8NH83 315 aa9.26□□□□□ -0.93
HPS4-218ENST00000519774 SCGB3A2Q96PL1 93 aa9.26□□□□□ -0.93
HPS4-218ENST00000519774 FYTTD1Q96QD9 318 aaKnown RBP9.26□□□□□ -0.93
HPS4-218ENST00000519774 TP53RKQ96S44 253 aa9.26□□□□□ -0.93
HPS4-218ENST00000519774 RTBDNQ9BSG5 229 aaPredicted RBP9.26□□□□□ -0.93
HPS4-218ENST00000519774 KLK15Q9H2R5 256 aa9.26□□□□□ -0.93
HPS4-218ENST00000519774 FAM212BQ9NTI7 297 aaPredicted RBP9.26□□□□□ -0.93
HPS4-218ENST00000519774 GPR132Q9UNW8 380 aa9.26□□□□□ -0.93
HPS4-218ENST00000519774 VSIG4Q9Y279 399 aa9.26□□□□□ -0.93
HPS4-218ENST00000519774 UPK2O00526 184 aa9.25□□□□□ -0.93
HPS4-218ENST00000519774 IGLV1-40P01703 118 aa9.25□□□□□ -0.93
HPS4-218ENST00000519774 OR5AC1P0C628 307 aa9.25□□□□□ -0.93
HPS4-218ENST00000519774 HLA-GP17693 338 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms