RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 C15orf62A8K5M9 175 aa4.41□□□□□ -1.7
CTNNA1-216ENST00000519489 CDRT1O95170 752 aa4.41□□□□□ -1.7
CTNNA1-216ENST00000519489 IGLV2-11P01706 119 aa4.41□□□□□ -1.7
CTNNA1-216ENST00000519489 UBE2KP61086 200 aa4.41□□□□□ -1.7
CTNNA1-216ENST00000519489 PLA2G7Q13093 441 aa4.41□□□□□ -1.7
CTNNA1-216ENST00000519489 CYLC2Q14093 348 aaPredicted RBP4.41□□□□□ -1.7
CTNNA1-216ENST00000519489 NHLRC3Q5JS37 347 aa4.41□□□□□ -1.7
CTNNA1-216ENST00000519489 NFE4Q86UQ8 179 aa4.41□□□□□ -1.7
CTNNA1-216ENST00000519489 OR52N1Q8NH53 320 aa4.41□□□□□ -1.7
CTNNA1-216ENST00000519489 MRPL30Q8TCC3 161 aaKnown RBP4.41□□□□□ -1.7
CTNNA1-216ENST00000519489 ASB17Q8WXJ9 295 aa4.41□□□□□ -1.7
CTNNA1-216ENST00000519489 SPIN2AQ99865 258 aa4.41□□□□□ -1.7
CTNNA1-216ENST00000519489 SPIN2BQ9BPZ2 258 aa4.41□□□□□ -1.7
CTNNA1-216ENST00000519489 BAIAP2Q9UQB8 552 aa4.41□□□□□ -1.7
CTNNA1-216ENST00000519489 MACF1Q9UPN3 7388 aaKnown RBP4.41□□□□□ -1.7
CTNNA1-216ENST00000519489 TRAV26-1A0A087WT03 109 aa4.4□□□□□ -1.71
CTNNA1-216ENST00000519489 IGHV3-21A0A0B4J1V1 117 aa4.4□□□□□ -1.71
CTNNA1-216ENST00000519489 H3BMM0 161 aa4.4□□□□□ -1.71
CTNNA1-216ENST00000519489 SC5DO75845 299 aa4.4□□□□□ -1.71
CTNNA1-216ENST00000519489 NAPSAO96009 420 aa4.4□□□□□ -1.71
CTNNA1-216ENST00000519489 PTBP1P26599 531 aaKnown RBP eCLIP4.4□□□□□ -1.71
CTNNA1-216ENST00000519489 RRM2P31350 389 aa4.4□□□□□ -1.71
CTNNA1-216ENST00000519489 RASSF2P50749 326 aa4.4□□□□□ -1.71
CTNNA1-216ENST00000519489 CKAP4Q07065 602 aaKnown RBP4.4□□□□□ -1.71
CTNNA1-216ENST00000519489 PPP1R8Q12972 351 aaKnown RBP4.4□□□□□ -1.71
CTNNA1-216ENST00000519489 HMGN3Q15651 99 aa4.4□□□□□ -1.71
CTNNA1-216ENST00000519489 GLT8D1Q68CQ7 371 aa4.4□□□□□ -1.71
CTNNA1-216ENST00000519489 OR10K2Q6IF99 312 aa4.4□□□□□ -1.71
CTNNA1-216ENST00000519489 RXFP4Q8TDU9 374 aa4.4□□□□□ -1.71
CTNNA1-216ENST00000519489 NEK7Q8TDX7 302 aa4.4□□□□□ -1.71
CTNNA1-216ENST00000519489 TNFAIP8L1Q8WVP5 186 aa4.4□□□□□ -1.71
CTNNA1-216ENST00000519489 C7orf26Q96N11 449 aa4.4□□□□□ -1.71
CTNNA1-216ENST00000519489 PAIP2Q9BPZ3 127 aaKnown RBP4.4□□□□□ -1.71
CTNNA1-216ENST00000519489 CCDC28BQ9BUN5 200 aa4.4□□□□□ -1.71
CTNNA1-216ENST00000519489 ISG20L2Q9H9L3 353 aaKnown RBP4.4□□□□□ -1.71
CTNNA1-216ENST00000519489 MSRB1Q9NZV6 116 aa4.4□□□□□ -1.71
CTNNA1-216ENST00000519489 OR1A1Q9P1Q5 309 aa4.4□□□□□ -1.71
CTNNA1-216ENST00000519489 TRAV2A0A0B4J234 112 aa4.39□□□□□ -1.71
CTNNA1-216ENST00000519489 A0A1W2PS18 150 aa4.39□□□□□ -1.71
CTNNA1-216ENST00000519489 DNASE2O00115 360 aaPredicted RBP4.39□□□□□ -1.71
CTNNA1-216ENST00000519489 NXPH4O95158 308 aa4.39□□□□□ -1.71
CTNNA1-216ENST00000519489 FGF9P31371 208 aaPredicted RBP4.39□□□□□ -1.71
CTNNA1-216ENST00000519489 FAM98BQ52LJ0 330 aaKnown RBP4.39□□□□□ -1.71
CTNNA1-216ENST00000519489 SLC35D3Q5M8T2 416 aa4.39□□□□□ -1.71
CTNNA1-216ENST00000519489 SIGIRRQ6IA17 410 aa4.39□□□□□ -1.71
CTNNA1-216ENST00000519489 SLC25A42Q86VD7 318 aa4.39□□□□□ -1.71
CTNNA1-216ENST00000519489 ZNF709Q8N972 641 aa4.39□□□□□ -1.71
CTNNA1-216ENST00000519489 OR10H4Q8NGA5 316 aa4.39□□□□□ -1.71
CTNNA1-216ENST00000519489 OR51A2Q8NGJ7 313 aa4.39□□□□□ -1.71
CTNNA1-216ENST00000519489 DCANP1Q8TF63 244 aa4.39□□□□□ -1.71
CTNNA1-216ENST00000519489 NSL1Q96IY1 281 aa4.39□□□□□ -1.71
CTNNA1-216ENST00000519489 OR10C1Q96KK4 312 aa4.39□□□□□ -1.71
CTNNA1-216ENST00000519489 VSIRQ9H7M9 311 aa4.39□□□□□ -1.71
CTNNA1-216ENST00000519489 ABCD2Q9UBJ2 740 aa4.39□□□□□ -1.71
CTNNA1-216ENST00000519489 RABAC1Q9UI14 185 aa4.39□□□□□ -1.71
CTNNA1-216ENST00000519489 TRAV3A0A0B4J244 114 aa4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 A0A1W2PQL4 384 aaPredicted RBP4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 M0R1X1 148 aa4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 APOA2P02652 100 aa4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 ISG15P05161 165 aa4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 ATP5G1P05496 136 aa4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 CTSGP08311 255 aa4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 ZNF735P0CB33 412 aa4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 GSTT2P0CG29 244 aa4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 GSTT2BP0CG30 244 aa4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 SAA1P0DJI8 122 aaPredicted RBP4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 IFNGR2P38484 337 aa4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 ATP5G3P48201 142 aa4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 PAFAH1B2P68402 229 aa4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 RSU1Q15404 277 aa4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 YIF1BQ5BJH7 314 aa4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 GDF5OSQ5U4N7 250 aa4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 NXNL2Q5VZ03 156 aa4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 CADM3Q8N126 398 aa4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 AQP11Q8NBQ7 271 aa4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 CCDC54Q8NEL0 328 aa4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 GLMPQ8WWB7 406 aa4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 IL1F10Q8WWZ1 152 aa4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 DGCR14Q96DF8 476 aaKnown RBP4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 GNPNAT1Q96EK6 184 aaPredicted RBP4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 PELI1Q96FA3 418 aa4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 GRAMD2BQ96HH9 432 aa4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 CXorf58Q96LI9 332 aa4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 SH3GL1Q99961 368 aa4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 ELAC2Q9BQ52 826 aaKnown RBP4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 C1QTNF4Q9BXJ3 329 aa4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 V9GYQ6 96 aa4.38□□□□□ -1.71
CTNNA1-216ENST00000519489 A0A096LPF7 62 aa4.37□□□□□ -1.71
CTNNA1-216ENST00000519489 A0A0J9YXV3 536 aa4.37□□□□□ -1.71
CTNNA1-216ENST00000519489 CBY3A6NI87 242 aa4.37□□□□□ -1.71
CTNNA1-216ENST00000519489 NME4O00746 187 aa4.37□□□□□ -1.71
CTNNA1-216ENST00000519489 ARPC2O15144 300 aa4.37□□□□□ -1.71
CTNNA1-216ENST00000519489 GPX5O75715 221 aa4.37□□□□□ -1.71
CTNNA1-216ENST00000519489 BAG2O95816 211 aa4.37□□□□□ -1.71
CTNNA1-216ENST00000519489 GNB3P16520 340 aa4.37□□□□□ -1.71
CTNNA1-216ENST00000519489 AZU1P20160 251 aa4.37□□□□□ -1.71
CTNNA1-216ENST00000519489 CASQ1P31415 396 aa4.37□□□□□ -1.71
CTNNA1-216ENST00000519489 ATP6AP1Q15904 470 aa4.37□□□□□ -1.71
CTNNA1-216ENST00000519489 RAB12Q6IQ22 244 aa4.37□□□□□ -1.71
CTNNA1-216ENST00000519489 TRAT1Q6PIZ9 186 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms