RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 THOC7Q6I9Y2 204 aaKnown RBP6.1□□□□□ -1.43
SDCBP-206ENST00000519115 CCDC144NLQ6NUI1 221 aa6.1□□□□□ -1.43
SDCBP-206ENST00000519115 C11orf87Q6NUJ2 197 aa6.1□□□□□ -1.43
SDCBP-206ENST00000519115 PRSS54Q6PEW0 395 aa6.1□□□□□ -1.43
SDCBP-206ENST00000519115 C12orf54Q6X4T0 127 aa6.1□□□□□ -1.43
SDCBP-206ENST00000519115 LYZL2Q7Z4W2 148 aa6.1□□□□□ -1.43
SDCBP-206ENST00000519115 ZNF546Q86UE3 836 aa6.1□□□□□ -1.43
SDCBP-206ENST00000519115 ZNF429Q86V71 674 aa6.1□□□□□ -1.43
SDCBP-206ENST00000519115 PDPNQ86YL7 162 aa6.1□□□□□ -1.43
SDCBP-206ENST00000519115 SPAG16Q8N0X2 631 aa6.1□□□□□ -1.43
SDCBP-206ENST00000519115 TMEM86BQ8N661 226 aa6.1□□□□□ -1.43
SDCBP-206ENST00000519115 SLC35G3Q8N808 338 aa6.1□□□□□ -1.43
SDCBP-206ENST00000519115 ZBTB8BQ8NAP8 495 aaPredicted RBP6.1□□□□□ -1.43
SDCBP-206ENST00000519115 OR4P4Q8NGL7 312 aa6.1□□□□□ -1.43
SDCBP-206ENST00000519115 OR4C13Q8NGP0 309 aa6.1□□□□□ -1.43
SDCBP-206ENST00000519115 OR10X1Q8NGY0 326 aa6.1□□□□□ -1.43
SDCBP-206ENST00000519115 OR51H1Q8NH63 302 aa6.1□□□□□ -1.43
SDCBP-206ENST00000519115 OR4A5Q8NH83 315 aa6.1□□□□□ -1.43
SDCBP-206ENST00000519115 VSTM2AQ8TAG5 236 aa6.1□□□□□ -1.43
SDCBP-206ENST00000519115 PPP1R1CQ8WVI7 109 aa6.1□□□□□ -1.43
SDCBP-206ENST00000519115 SSX3Q99909 188 aa6.1□□□□□ -1.43
SDCBP-206ENST00000519115 GON7Q9BXV9 100 aa6.1□□□□□ -1.43
SDCBP-206ENST00000519115 PARP12Q9H0J9 701 aaKnown RBP6.1□□□□□ -1.43
SDCBP-206ENST00000519115 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.1□□□□□ -1.43
SDCBP-206ENST00000519115 FKBP11Q9NYL4 201 aa6.1□□□□□ -1.43
SDCBP-206ENST00000519115 DPM3Q9P2X0 92 aa6.1□□□□□ -1.43
SDCBP-206ENST00000519115 VPREB3Q9UKI3 123 aa6.1□□□□□ -1.43
SDCBP-206ENST00000519115 RNF150Q9ULK6 438 aa6.1□□□□□ -1.43
SDCBP-206ENST00000519115 HILPDAQ9Y5L2 63 aa6.1□□□□□ -1.43
SDCBP-206ENST00000519115 SAA2-SAA4A0A096LPE2 208 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 IGHV3-43A0A0B4J1X8 118 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 A0A1W2PPE3 182 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 TMEM89A2RUT3 159 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 LINC00473A8K010 186 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 E5RGE8 158 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 G3V3Q6 166 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 BUB1B-PAK6H3BSN5 160 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 TAAR5O14804 337 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 APOA2P02652 100 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 CRYBA1P05813 215 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 HOXB5P09067 269 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 SAA2P0DJI9 122 aaPredicted RBP6.09□□□□□ -1.43
SDCBP-206ENST00000519115 CT45A6P0DMU7 189 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 CT45A5P0DMU8 189 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 CT45A7P0DMV0 189 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 IGHV3-43DP0DP04 118 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 PVALBP20472 110 aaPredicted RBP6.09□□□□□ -1.43
SDCBP-206ENST00000519115 CD1BP29016 333 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 LPAR6P43657 344 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 EIF2B2P49770 351 aaKnown RBP6.09□□□□□ -1.43
SDCBP-206ENST00000519115 RPL30P62888 115 aaKnown RBP6.09□□□□□ -1.43
SDCBP-206ENST00000519115 RELBQ01201 579 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 SMCO1Q147U7 214 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 C2orf68Q2NKX9 166 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 SP6Q3SY56 376 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 LCE2AQ5TA79 106 aaPredicted RBP6.09□□□□□ -1.43
SDCBP-206ENST00000519115 FAM53AQ6NSI3 398 aaPredicted RBP6.09□□□□□ -1.43
SDCBP-206ENST00000519115 ACOT7LQ6ZUV0 252 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 C5orf24Q7Z6I8 188 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 THNSL2Q86YJ6 484 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 FOXRED2Q8IWF2 684 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 PUSL1Q8N0Z8 303 aaKnown RBP6.09□□□□□ -1.43
SDCBP-206ENST00000519115 LYG1Q8N1E2 194 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 INO80EQ8NBZ0 244 aaPredicted RBP6.09□□□□□ -1.43
SDCBP-206ENST00000519115 OR4D5Q8NGN0 318 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 LHFPL5Q8TAF8 219 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 TCTEX1D2Q8WW35 142 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 MALSU1Q96EH3 234 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 OR10C1Q96KK4 312 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 RAB40CQ96S21 281 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 RNF126Q9BV68 326 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 C1RLQ9NZP8 487 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 NSG2Q9Y328 171 aa6.09□□□□□ -1.43
SDCBP-206ENST00000519115 C13orf42A0A1B0GVH6 325 aa6.08□□□□□ -1.44
SDCBP-206ENST00000519115 MARCH11A6NNE9 402 aa6.08□□□□□ -1.44
SDCBP-206ENST00000519115 INS-IGF2F8WCM5 200 aa6.08□□□□□ -1.44
SDCBP-206ENST00000519115 M0R1X1 148 aa6.08□□□□□ -1.44
SDCBP-206ENST00000519115 DEDDO75618 318 aa6.08□□□□□ -1.44
SDCBP-206ENST00000519115 ADAP1O75689 374 aa6.08□□□□□ -1.44
SDCBP-206ENST00000519115 TSPAN9O75954 239 aa6.08□□□□□ -1.44
SDCBP-206ENST00000519115 IGKV1-39P01597 117 aa6.08□□□□□ -1.44
SDCBP-206ENST00000519115 IGKV1D-39P04432 117 aa6.08□□□□□ -1.44
SDCBP-206ENST00000519115 MDKP21741 143 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-206ENST00000519115 HTR1DP28221 377 aa6.08□□□□□ -1.44
SDCBP-206ENST00000519115 NUP62P37198 522 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-206ENST00000519115 NKX2-1P43699 371 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-206ENST00000519115 P2RY1P47900 373 aa6.08□□□□□ -1.44
SDCBP-206ENST00000519115 DYNLT3P51808 116 aa6.08□□□□□ -1.44
SDCBP-206ENST00000519115 ERVK-16P61578 105 aa6.08□□□□□ -1.44
SDCBP-206ENST00000519115 EBI3Q14213 229 aa6.08□□□□□ -1.44
SDCBP-206ENST00000519115 AANATQ16613 207 aa6.08□□□□□ -1.44
SDCBP-206ENST00000519115 H2BFWTQ7Z2G1 175 aa6.08□□□□□ -1.44
SDCBP-206ENST00000519115 TMEM219Q86XT9 240 aa6.08□□□□□ -1.44
SDCBP-206ENST00000519115 TGIF2LXQ8IUE1 241 aa6.08□□□□□ -1.44
SDCBP-206ENST00000519115 ZNF383Q8NA42 475 aa6.08□□□□□ -1.44
SDCBP-206ENST00000519115 TEX45Q8NA69 505 aa6.08□□□□□ -1.44
SDCBP-206ENST00000519115 DRAXINQ8NBI3 349 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-206ENST00000519115 OR8H1Q8NGG4 311 aa6.08□□□□□ -1.44
SDCBP-206ENST00000519115 OR5R1Q8NH85 324 aa6.08□□□□□ -1.44
SDCBP-206ENST00000519115 FLYWCH2Q96CP2 140 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms