RNA–Protein interactions for RNA: ENST00000518936.5

PCM1-210, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-210ENST00000518936 VDAC1P21796 283 aa16.97■□□□□ 0.31
PCM1-210ENST00000518936 SUPT4H1P63272 117 aaKnown RBP16.97■□□□□ 0.31
PCM1-210ENST00000518936 KRTAP21-3Q3LHN1 58 aa16.97■□□□□ 0.31
PCM1-210ENST00000518936 SP6Q3SY56 376 aa16.97■□□□□ 0.31
PCM1-210ENST00000518936 TMEM268Q5VZI3 342 aa16.97■□□□□ 0.31
PCM1-210ENST00000518936 THOC7Q6I9Y2 204 aaKnown RBP16.97■□□□□ 0.31
PCM1-210ENST00000518936 OR4A47Q6IF82 309 aa16.97■□□□□ 0.31
PCM1-210ENST00000518936 ZNF562Q6V9R5 426 aa16.97■□□□□ 0.31
PCM1-210ENST00000518936 MRPL41Q8IXM3 137 aaKnown RBP16.97■□□□□ 0.31
PCM1-210ENST00000518936 PUSL1Q8N0Z8 303 aaKnown RBP16.97■□□□□ 0.31
PCM1-210ENST00000518936 TMEM167AQ8TBQ9 72 aa16.97■□□□□ 0.31
PCM1-210ENST00000518936 LSM10Q969L4 123 aaKnown RBP16.97■□□□□ 0.31
PCM1-210ENST00000518936 FBXL15Q9H469 300 aa16.97■□□□□ 0.31
PCM1-210ENST00000518936 TMEM140Q9NV12 185 aa16.97■□□□□ 0.31
PCM1-210ENST00000518936 PRNDQ9UKY0 176 aa16.97■□□□□ 0.31
PCM1-210ENST00000518936 TMED3Q9Y3Q3 217 aa16.97■□□□□ 0.31
PCM1-210ENST00000518936 SNRPGP15A8MWD9 76 aa16.96■□□□□ 0.31
PCM1-210ENST00000518936 CNIH1O95406 144 aa16.96■□□□□ 0.31
PCM1-210ENST00000518936 IFNA21P01568 189 aa16.96■□□□□ 0.31
PCM1-210ENST00000518936 SLC35E3Q7Z769 313 aa16.96■□□□□ 0.31
PCM1-210ENST00000518936 CASTOR1Q8WTX7 329 aa16.96■□□□□ 0.31
PCM1-210ENST00000518936 SEC22AQ96IW7 307 aa16.96■□□□□ 0.31
PCM1-210ENST00000518936 MMP24Q9Y5R2 645 aa16.96■□□□□ 0.31
PCM1-210ENST00000518936 SRRM4A7MD48 611 aaKnown RBP16.95■□□□□ 0.3
PCM1-210ENST00000518936 IGHG2P01859 326 aa16.95■□□□□ 0.3
PCM1-210ENST00000518936 RPL8P62917 257 aaKnown RBP16.95■□□□□ 0.3
PCM1-210ENST00000518936 TMEM267Q0VDI3 215 aaPredicted RBP16.95■□□□□ 0.3
PCM1-210ENST00000518936 FOXL1Q12952 345 aa16.95■□□□□ 0.3
PCM1-210ENST00000518936 PRSS8Q16651 343 aa16.95■□□□□ 0.3
PCM1-210ENST00000518936 C9orf152Q5JTZ5 239 aa16.95■□□□□ 0.3
PCM1-210ENST00000518936 SSX9Q7RTT3 188 aa16.95■□□□□ 0.3
PCM1-210ENST00000518936 Q8N2B8 174 aa16.95■□□□□ 0.3
PCM1-210ENST00000518936 OR4A16Q8NH70 328 aa16.95■□□□□ 0.3
PCM1-210ENST00000518936 ZNF431Q8TF32 576 aaPredicted RBP16.95■□□□□ 0.3
PCM1-210ENST00000518936 MITD1Q8WV92 249 aa16.95■□□□□ 0.3
PCM1-210ENST00000518936 TMEM158Q8WZ71 300 aa16.95■□□□□ 0.3
PCM1-210ENST00000518936 RITA1Q96K30 269 aa16.95■□□□□ 0.3
PCM1-210ENST00000518936 TMEM68Q96MH6 324 aa16.95■□□□□ 0.3
PCM1-210ENST00000518936 SPIN2AQ99865 258 aa16.95■□□□□ 0.3
PCM1-210ENST00000518936 SPIN2BQ9BPZ2 258 aa16.95■□□□□ 0.3
PCM1-210ENST00000518936 PDCD10Q9BUL8 212 aa16.95■□□□□ 0.3
PCM1-210ENST00000518936 C16orf95Q9H693 158 aa16.95■□□□□ 0.3
PCM1-210ENST00000518936 BEX1Q9HBH7 125 aa16.95■□□□□ 0.3
PCM1-210ENST00000518936 ZNF580Q9UK33 172 aa16.95■□□□□ 0.3
PCM1-210ENST00000518936 AP4M1O00189 453 aa16.94■□□□□ 0.3
PCM1-210ENST00000518936 RBMXL2O75526 392 aaKnown RBP16.94■□□□□ 0.3
PCM1-210ENST00000518936 CRYGBP07316 175 aa16.94■□□□□ 0.3
PCM1-210ENST00000518936 CNTFRP26992 372 aa16.94■□□□□ 0.3
PCM1-210ENST00000518936 G6PCP35575 357 aa16.94■□□□□ 0.3
PCM1-210ENST00000518936 SELENOHQ8IZQ5 122 aaKnown RBP16.94■□□□□ 0.3
PCM1-210ENST00000518936 COMMD5Q9GZQ3 224 aa16.94■□□□□ 0.3
PCM1-210ENST00000518936 HKR1P10072 659 aa16.93■□□□□ 0.3
PCM1-210ENST00000518936 VDAC2P45880 294 aaPredicted RBP16.93■□□□□ 0.3
PCM1-210ENST00000518936 HSD17B13Q7Z5P4 300 aaPredicted RBP16.93■□□□□ 0.3
PCM1-210ENST00000518936 OR5B3Q8NH48 314 aa16.93■□□□□ 0.3
PCM1-210ENST00000518936 UPK2O00526 184 aa16.92■□□□□ 0.3
PCM1-210ENST00000518936 CA2P00918 260 aa16.92■□□□□ 0.3
PCM1-210ENST00000518936 SLC25A6P12236 298 aa16.92■□□□□ 0.3
PCM1-210ENST00000518936 HLA-GP17693 338 aa16.92■□□□□ 0.3
PCM1-210ENST00000518936 VKORC1L1Q8N0U8 176 aa16.92■□□□□ 0.3
PCM1-210ENST00000518936 SLC35G3Q8N808 338 aa16.92■□□□□ 0.3
PCM1-210ENST00000518936 ABHD5Q8WTS1 349 aa16.92■□□□□ 0.3
PCM1-210ENST00000518936 CHPT1Q8WUD6 406 aa16.92■□□□□ 0.3
PCM1-210ENST00000518936 ARPC1AQ92747 370 aa16.92■□□□□ 0.3
PCM1-210ENST00000518936 SRSF8Q9BRL6 282 aaKnown RBP16.92■□□□□ 0.3
PCM1-210ENST00000518936 OR51J1Q9H342 316 aa16.92■□□□□ 0.3
PCM1-210ENST00000518936 ZNF430Q9H8G1 570 aaPredicted RBP16.92■□□□□ 0.3
PCM1-210ENST00000518936 COA4Q9NYJ1 87 aa16.92■□□□□ 0.3
PCM1-210ENST00000518936 A0A1B0GU03 582 aa16.91■□□□□ 0.3
PCM1-210ENST00000518936 IGKV1-39P01597 117 aa16.91■□□□□ 0.3
PCM1-210ENST00000518936 IGKV1D-39P04432 117 aa16.91■□□□□ 0.3
PCM1-210ENST00000518936 AMY1AP04745 511 aa16.91■□□□□ 0.3
PCM1-210ENST00000518936 BLCAPP62952 87 aa16.91■□□□□ 0.3
PCM1-210ENST00000518936 SLC35B1P78383 322 aa16.91■□□□□ 0.3
PCM1-210ENST00000518936 FXYD3Q14802 87 aa16.91■□□□□ 0.3
PCM1-210ENST00000518936 OXA1LQ15070 435 aa16.91■□□□□ 0.3
PCM1-210ENST00000518936 TNXAQ16473 311 aa16.91■□□□□ 0.3
PCM1-210ENST00000518936 ZNF429Q86V71 674 aa16.91■□□□□ 0.3
PCM1-210ENST00000518936 C12orf45Q8N5I9 185 aaPredicted RBP16.91■□□□□ 0.3
PCM1-210ENST00000518936 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.91■□□□□ 0.3
PCM1-210ENST00000518936 ZNF257Q9Y2Q1 563 aa16.91■□□□□ 0.3
PCM1-210ENST00000518936 C15orf61A6NNL5 157 aa16.9■□□□□ 0.3
PCM1-210ENST00000518936 IGF1P05019 195 aa16.9■□□□□ 0.3
PCM1-210ENST00000518936 IL6RP08887 468 aaPredicted RBP16.9■□□□□ 0.3
PCM1-210ENST00000518936 SULT1A3P0DMM9 295 aa16.9■□□□□ 0.3
PCM1-210ENST00000518936 SULT1A4P0DMN0 295 aa16.9■□□□□ 0.3
PCM1-210ENST00000518936 COMPP49747 757 aaPredicted RBP16.9■□□□□ 0.3
PCM1-210ENST00000518936 GNB1P62873 340 aa16.9■□□□□ 0.3
PCM1-210ENST00000518936 CX3CL1P78423 397 aa16.9■□□□□ 0.3
PCM1-210ENST00000518936 ANKRD55Q3KP44 614 aa16.9■□□□□ 0.3
PCM1-210ENST00000518936 FBLN7Q53RD9 439 aa16.9■□□□□ 0.3
PCM1-210ENST00000518936 Q6ZSV7 163 aa16.9■□□□□ 0.3
PCM1-210ENST00000518936 CLCC1Q96S66 551 aa16.9■□□□□ 0.3
PCM1-210ENST00000518936 ZNF702PQ9H963 129 aa16.9■□□□□ 0.3
PCM1-210ENST00000518936 FOXA2Q9Y261 457 aaPredicted RBP16.9■□□□□ 0.3
PCM1-210ENST00000518936 JMJD1CQ15652 2540 aa16.9■□□□□ 0.3
PCM1-210ENST00000518936 IGHV7-81A0A0B4J1V7 117 aa16.89■□□□□ 0.29
PCM1-210ENST00000518936 CYB5BO43169 146 aa16.89■□□□□ 0.29
PCM1-210ENST00000518936 RPL27AP46776 148 aaKnown RBP16.89■□□□□ 0.29
PCM1-210ENST00000518936 OR1L8Q8NGR8 309 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms