RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 SPHKAPQ2M3C7 1700 aa0.52□□□□□ -2.33
SCARNA1-201ENST00000517138 KIDINS220Q9ULH0 1771 aa0.52□□□□□ -2.33
SCARNA1-201ENST00000517138 SIPA1L1O43166 1804 aa0.52□□□□□ -2.33
SCARNA1-201ENST00000517138 PHGR1C9JFL3 82 aa0.51□□□□□ -2.33
SCARNA1-201ENST00000517138 CRXO43186 299 aaPredicted RBP0.51□□□□□ -2.33
SCARNA1-201ENST00000517138 MRPS14O60783 128 aaKnown RBP0.51□□□□□ -2.33
SCARNA1-201ENST00000517138 XRCC4Q13426 336 aa0.51□□□□□ -2.33
SCARNA1-201ENST00000517138 CDK13Q14004 1512 aaKnown RBP0.51□□□□□ -2.33
SCARNA1-201ENST00000517138 C18orf21Q32NC0 220 aaPredicted RBP0.51□□□□□ -2.33
SCARNA1-201ENST00000517138 ZC3H13Q5T200 1668 aaKnown RBP0.51□□□□□ -2.33
SCARNA1-201ENST00000517138 TMEM42Q69YG0 159 aa0.51□□□□□ -2.33
SCARNA1-201ENST00000517138 CLDND2Q8NHS1 167 aa0.51□□□□□ -2.33
SCARNA1-201ENST00000517138 PKDREJQ9NTG1 2253 aa0.51□□□□□ -2.33
SCARNA1-201ENST00000517138 DMDP11532 3685 aa0.51□□□□□ -2.33
SCARNA1-201ENST00000517138 CHD9Q3L8U1 2897 aa0.51□□□□□ -2.33
SCARNA1-201ENST00000517138 EXPH5Q8NEV8 1989 aa0.5□□□□□ -2.33
SCARNA1-201ENST00000517138 CAMSAP1Q5T5Y3 1602 aa0.5□□□□□ -2.33
SCARNA1-201ENST00000517138 KIAA0586Q9BVV6 1533 aa0.5□□□□□ -2.33
SCARNA1-201ENST00000517138 SRRM2Q9UQ35 2752 aaKnown RBP0.5□□□□□ -2.33
SCARNA1-201ENST00000517138 MAP3K5Q99683 1374 aa0.5□□□□□ -2.33
SCARNA1-201ENST00000517138 RAB19A4D1S5 217 aa0.5□□□□□ -2.33
SCARNA1-201ENST00000517138 M0QYV0 167 aa0.5□□□□□ -2.33
SCARNA1-201ENST00000517138 BHLHE40O14503 412 aa0.5□□□□□ -2.33
SCARNA1-201ENST00000517138 CYTH3O43739 400 aa0.5□□□□□ -2.33
SCARNA1-201ENST00000517138 CD24P25063 80 aa0.5□□□□□ -2.33
SCARNA1-201ENST00000517138 AKR1C3P42330 323 aa0.5□□□□□ -2.33
SCARNA1-201ENST00000517138 TBC1D28Q2M2D7 210 aa0.5□□□□□ -2.33
SCARNA1-201ENST00000517138 AMTNQ6UX39 209 aa0.5□□□□□ -2.33
SCARNA1-201ENST00000517138 KRTAP19-3Q7Z4W3 81 aa0.5□□□□□ -2.33
SCARNA1-201ENST00000517138 MRPL52Q86TS9 123 aaKnown RBP0.5□□□□□ -2.33
SCARNA1-201ENST00000517138 KRTAP2-1Q9BYU5 128 aa0.5□□□□□ -2.33
SCARNA1-201ENST00000517138 RAB1BQ9H0U4 201 aa0.5□□□□□ -2.33
SCARNA1-201ENST00000517138 SLC2A9Q9NRM0 540 aa0.5□□□□□ -2.33
SCARNA1-201ENST00000517138 AHCTF1Q8WYP5 2266 aa0.5□□□□□ -2.33
SCARNA1-201ENST00000517138 LAMA5O15230 3695 aa0.5□□□□□ -2.33
SCARNA1-201ENST00000517138 LRP1Q07954 4544 aaKnown RBP0.5□□□□□ -2.33
SCARNA1-201ENST00000517138 MAP3K1Q13233 1512 aa0.49□□□□□ -2.33
SCARNA1-201ENST00000517138 NRXN1Q9ULB1 1477 aa0.49□□□□□ -2.33
SCARNA1-201ENST00000517138 HSPG2P98160 4391 aa0.49□□□□□ -2.33
SCARNA1-201ENST00000517138 UHRF1BP1Q6BDS2 1440 aa0.49□□□□□ -2.33
SCARNA1-201ENST00000517138 IGHV3-64A0A075B6Q5 118 aa0.49□□□□□ -2.33
SCARNA1-201ENST00000517138 UBE2L6O14933 153 aa0.49□□□□□ -2.33
SCARNA1-201ENST00000517138 HCRTO43612 131 aa0.49□□□□□ -2.33
SCARNA1-201ENST00000517138 CIAO1O76071 339 aa0.49□□□□□ -2.33
SCARNA1-201ENST00000517138 ASS1P00966 412 aaKnown RBP0.49□□□□□ -2.33
SCARNA1-201ENST00000517138 CCR2P41597 374 aa0.49□□□□□ -2.33
SCARNA1-201ENST00000517138 TAS2R45P59539 299 aa0.49□□□□□ -2.33
SCARNA1-201ENST00000517138 SPATA12Q7Z6I5 190 aa0.49□□□□□ -2.33
SCARNA1-201ENST00000517138 GID4Q8IVV7 300 aa0.49□□□□□ -2.33
SCARNA1-201ENST00000517138 ACY3Q96HD9 319 aa0.49□□□□□ -2.33
SCARNA1-201ENST00000517138 ADAT1Q9BUB4 502 aaKnown RBP0.49□□□□□ -2.33
SCARNA1-201ENST00000517138 GLS2Q9UI32 602 aa0.49□□□□□ -2.33
SCARNA1-201ENST00000517138 ENPP5Q9UJA9 477 aa0.49□□□□□ -2.33
SCARNA1-201ENST00000517138 TNRC6CQ9HCJ0 1690 aaKnown RBP0.49□□□□□ -2.33
SCARNA1-201ENST00000517138 RP1P56715 2156 aa0.49□□□□□ -2.33
SCARNA1-201ENST00000517138 TARBP1Q13395 1621 aaKnown RBP0.49□□□□□ -2.33
SCARNA1-201ENST00000517138 REREQ9P2R6 1566 aa0.49□□□□□ -2.33
SCARNA1-201ENST00000517138 KCPQ6ZWJ8 1503 aa0.48□□□□□ -2.33
SCARNA1-201ENST00000517138 ZFC3H1O60293 1989 aaKnown RBP0.48□□□□□ -2.33
SCARNA1-201ENST00000517138 TACC2O95359 2948 aa0.48□□□□□ -2.33
SCARNA1-201ENST00000517138 DISP2A7MBM2 1401 aa0.48□□□□□ -2.33
SCARNA1-201ENST00000517138 FAM135BQ49AJ0 1406 aa0.48□□□□□ -2.33
SCARNA1-201ENST00000517138 PKHD1P08F94 4074 aa0.48□□□□□ -2.33
SCARNA1-201ENST00000517138 FRAS1Q86XX4 4008 aa0.48□□□□□ -2.33
SCARNA1-201ENST00000517138 LAMA1P25391 3075 aa0.48□□□□□ -2.33
SCARNA1-201ENST00000517138 IGKV2D-26A0A0A0MRZ7 120 aa0.48□□□□□ -2.33
SCARNA1-201ENST00000517138 SNAP29O95721 258 aa0.48□□□□□ -2.33
SCARNA1-201ENST00000517138 CCNOP22674 350 aa0.48□□□□□ -2.33
SCARNA1-201ENST00000517138 HSPA9P38646 679 aaKnown RBP0.48□□□□□ -2.33
SCARNA1-201ENST00000517138 CDK9P50750 372 aaKnown RBP0.48□□□□□ -2.33
SCARNA1-201ENST00000517138 PSMD7P51665 324 aa0.48□□□□□ -2.33
SCARNA1-201ENST00000517138 TAS2R30P59541 319 aa0.48□□□□□ -2.33
SCARNA1-201ENST00000517138 RAB31Q13636 194 aa0.48□□□□□ -2.33
SCARNA1-201ENST00000517138 MESTQ5EB52 335 aa0.48□□□□□ -2.33
SCARNA1-201ENST00000517138 TTC33Q6PID6 262 aaPredicted RBP0.48□□□□□ -2.33
SCARNA1-201ENST00000517138 Q8N2B8 174 aa0.48□□□□□ -2.33
SCARNA1-201ENST00000517138 PACRGLQ8N7B6 248 aa0.48□□□□□ -2.33
SCARNA1-201ENST00000517138 SMCR5Q8TEV8 140 aa0.48□□□□□ -2.33
SCARNA1-201ENST00000517138 TNFAIP8L1Q8WVP5 186 aa0.48□□□□□ -2.33
SCARNA1-201ENST00000517138 CIDECQ96AQ7 238 aaPredicted RBP0.48□□□□□ -2.33
SCARNA1-201ENST00000517138 GNB1LQ9BYB4 327 aa0.48□□□□□ -2.33
SCARNA1-201ENST00000517138 ADGRB1O14514 1584 aa0.48□□□□□ -2.33
SCARNA1-201ENST00000517138 KDM5DQ9BY66 1539 aa0.48□□□□□ -2.33
SCARNA1-201ENST00000517138 TCOF1Q13428 1488 aaKnown RBP0.48□□□□□ -2.33
SCARNA1-201ENST00000517138 ACACAQ13085 2346 aa0.47□□□□□ -2.33
SCARNA1-201ENST00000517138 IGKV1-9A0A0C4DH69 117 aa0.47□□□□□ -2.33
SCARNA1-201ENST00000517138 IL9P15248 144 aa0.47□□□□□ -2.33
SCARNA1-201ENST00000517138 CCR7P32248 378 aa0.47□□□□□ -2.33
SCARNA1-201ENST00000517138 AQP4P55087 323 aa0.47□□□□□ -2.33
SCARNA1-201ENST00000517138 CTBP2P56545 445 aa0.47□□□□□ -2.33
SCARNA1-201ENST00000517138 KRTAP21-1Q3LI58 79 aa0.47□□□□□ -2.33
SCARNA1-201ENST00000517138 RNASE6Q93091 150 aaKnown RBP0.47□□□□□ -2.33
SCARNA1-201ENST00000517138 OR51B6Q9H340 312 aa0.47□□□□□ -2.33
SCARNA1-201ENST00000517138 MRM2Q9UI43 246 aaKnown RBP0.47□□□□□ -2.33
SCARNA1-201ENST00000517138 AKAP9Q99996 3911 aa0.47□□□□□ -2.33
SCARNA1-201ENST00000517138 PKD1L3Q7Z443 1732 aa0.47□□□□□ -2.33
SCARNA1-201ENST00000517138 C10orf71Q711Q0 1435 aa0.47□□□□□ -2.33
SCARNA1-201ENST00000517138 HECTD4Q9Y4D8 3996 aa0.47□□□□□ -2.33
SCARNA1-201ENST00000517138 FLT4P35916 1363 aa0.46□□□□□ -2.34
SCARNA1-201ENST00000517138 UGGT1Q9NYU2 1555 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms