RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 ABHD5Q8WTS1 349 aa9.37□□□□□ -0.91
SNF8-215ENST00000515572 TP53RKQ96S44 253 aa9.37□□□□□ -0.91
SNF8-215ENST00000515572 VSIG4Q9Y279 399 aa9.37□□□□□ -0.91
SNF8-215ENST00000515572 TET2Q6N021 2002 aaPredicted RBP9.37□□□□□ -0.91
SNF8-215ENST00000515572 TRAV41A0A0B4J266 112 aa9.36□□□□□ -0.91
SNF8-215ENST00000515572 LINC00854A0A1B0GVQ3 168 aa9.36□□□□□ -0.91
SNF8-215ENST00000515572 CRYM-AS1A6NIL9 109 aa9.36□□□□□ -0.91
SNF8-215ENST00000515572 MARCH11A6NNE9 402 aa9.36□□□□□ -0.91
SNF8-215ENST00000515572 UCP1P25874 307 aa9.36□□□□□ -0.91
SNF8-215ENST00000515572 GNB1P62873 340 aa9.36□□□□□ -0.91
SNF8-215ENST00000515572 NDPQ00604 133 aa9.36□□□□□ -0.91
SNF8-215ENST00000515572 TNXAQ16473 311 aa9.36□□□□□ -0.91
SNF8-215ENST00000515572 MRGPRG-AS1Q2M3A8 158 aa9.36□□□□□ -0.91
SNF8-215ENST00000515572 AKIRIN2Q53H80 203 aa9.36□□□□□ -0.91
SNF8-215ENST00000515572 TEX38Q6PEX7 206 aa9.36□□□□□ -0.91
SNF8-215ENST00000515572 SSX9Q7RTT3 188 aa9.36□□□□□ -0.91
SNF8-215ENST00000515572 SGPP2Q8IWX5 399 aa9.36□□□□□ -0.91
SNF8-215ENST00000515572 TMEM68Q96MH6 324 aa9.36□□□□□ -0.91
SNF8-215ENST00000515572 NAA60Q9H7X0 242 aa9.36□□□□□ -0.91
SNF8-215ENST00000515572 ZNF430Q9H8G1 570 aaPredicted RBP9.36□□□□□ -0.91
SNF8-215ENST00000515572 TMEM140Q9NV12 185 aa9.36□□□□□ -0.91
SNF8-215ENST00000515572 LINC00527Q9UJ94 153 aa9.36□□□□□ -0.91
SNF8-215ENST00000515572 KCNIP3Q9Y2W7 256 aa9.36□□□□□ -0.91
SNF8-215ENST00000515572 PIGBOS1A0A0B4J2F0 54 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 UPK2O00526 184 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 ARPC1BO15143 372 aaKnown RBP9.35□□□□□ -0.91
SNF8-215ENST00000515572 PLA2G10O15496 165 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 LYRM1O43325 122 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 UPK1BO75841 260 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 NDUFB6O95139 128 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 KRASP01116 189 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 IGHG4P01861 327 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 OPN1MWP04001 364 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 IL6RP08887 468 aaPredicted RBP9.35□□□□□ -0.91
SNF8-215ENST00000515572 OR5AC1P0C628 307 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 OPN1MW2P0DN77 364 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 OPN1MW3P0DN78 364 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 CD28P10747 220 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 G6PCP35575 357 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 RPL8P62917 257 aaKnown RBP9.35□□□□□ -0.91
SNF8-215ENST00000515572 SSBP2P81877 361 aaPredicted RBP9.35□□□□□ -0.91
SNF8-215ENST00000515572 DHODHQ02127 395 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 CFHR3Q02985 330 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 SRSF4Q08170 494 aaKnown RBP9.35□□□□□ -0.91
SNF8-215ENST00000515572 FOXE3Q13461 319 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 TRIM16LQ309B1 348 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 C19orf54Q5BKX5 351 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 MINDY2Q8NBR6 621 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 GRPEL2Q8TAA5 225 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 SRSF12Q8WXF0 261 aaKnown RBP9.35□□□□□ -0.91
SNF8-215ENST00000515572 GALNT14Q96FL9 552 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 TSC22D3Q99576 134 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 TMEM222Q9H0R3 208 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 FBXO7Q9Y3I1 522 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 NUBP2Q9Y5Y2 271 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 WSB1Q9Y6I7 421 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 TNCP24821 2201 aa9.35□□□□□ -0.91
SNF8-215ENST00000515572 G3V318 75 aa9.34□□□□□ -0.91
SNF8-215ENST00000515572 SNAPC5O75971 98 aa9.34□□□□□ -0.91
SNF8-215ENST00000515572 ELANEP08246 267 aa9.34□□□□□ -0.91
SNF8-215ENST00000515572 EGR2P11161 476 aaPredicted RBP9.34□□□□□ -0.91
SNF8-215ENST00000515572 ANXA3P12429 323 aa9.34□□□□□ -0.91
SNF8-215ENST00000515572 AKR1C4P17516 323 aa9.34□□□□□ -0.91
SNF8-215ENST00000515572 HLA-GP17693 338 aa9.34□□□□□ -0.91
SNF8-215ENST00000515572 PPIFP30405 207 aaKnown RBP9.34□□□□□ -0.91
SNF8-215ENST00000515572 CCR6P51684 374 aa9.34□□□□□ -0.91
SNF8-215ENST00000515572 CD83Q01151 205 aa9.34□□□□□ -0.91
SNF8-215ENST00000515572 ECSCRQ19T08 205 aa9.34□□□□□ -0.91
SNF8-215ENST00000515572 SP6Q3SY56 376 aa9.34□□□□□ -0.91
SNF8-215ENST00000515572 TMEM128Q5BJH2 165 aa9.34□□□□□ -0.91
SNF8-215ENST00000515572 UNQ5815/PRO19632Q6UWF5 114 aa9.34□□□□□ -0.91
SNF8-215ENST00000515572 H2BFWTQ7Z2G1 175 aa9.34□□□□□ -0.91
SNF8-215ENST00000515572 TMED4Q7Z7H5 227 aa9.34□□□□□ -0.91
SNF8-215ENST00000515572 ZNF329Q86UD4 541 aa9.34□□□□□ -0.91
SNF8-215ENST00000515572 NDUFA11Q86Y39 141 aa9.34□□□□□ -0.91
SNF8-215ENST00000515572 CENPSQ8N2Z9 138 aa9.34□□□□□ -0.91
SNF8-215ENST00000515572 ADAD2Q8NCV1 583 aaKnown RBP9.34□□□□□ -0.91
SNF8-215ENST00000515572 LFNGQ8NES3 379 aa9.34□□□□□ -0.91
SNF8-215ENST00000515572 OR5M8Q8NGP6 311 aa9.34□□□□□ -0.91
SNF8-215ENST00000515572 TMEM230Q96A57 120 aa9.34□□□□□ -0.91
SNF8-215ENST00000515572 SEC22AQ96IW7 307 aa9.34□□□□□ -0.91
SNF8-215ENST00000515572 PHB2Q99623 299 aa9.34□□□□□ -0.91
SNF8-215ENST00000515572 SPIN2AQ99865 258 aa9.34□□□□□ -0.91
SNF8-215ENST00000515572 SPIN2BQ9BPZ2 258 aa9.34□□□□□ -0.91
SNF8-215ENST00000515572 FAM103A1Q9BTL3 118 aaKnown RBP9.34□□□□□ -0.91
SNF8-215ENST00000515572 FOXA2Q9Y261 457 aaPredicted RBP9.34□□□□□ -0.91
SNF8-215ENST00000515572 A0A1W2PN81 502 aa9.33□□□□□ -0.92
SNF8-215ENST00000515572 TCRBV4S1A1TA0A5B7 111 aa9.33□□□□□ -0.92
SNF8-215ENST00000515572 MSGN1A6NI15 193 aa9.33□□□□□ -0.92
SNF8-215ENST00000515572 M0QZ24 198 aa9.33□□□□□ -0.92
SNF8-215ENST00000515572 CDS2O95674 445 aa9.33□□□□□ -0.92
SNF8-215ENST00000515572 IGKV1-39P01597 117 aa9.33□□□□□ -0.92
SNF8-215ENST00000515572 IGLV1-40P01703 118 aa9.33□□□□□ -0.92
SNF8-215ENST00000515572 IGKV1D-39P04432 117 aa9.33□□□□□ -0.92
SNF8-215ENST00000515572 BTCP35070 178 aa9.33□□□□□ -0.92
SNF8-215ENST00000515572 CHRNA7P36544 502 aa9.33□□□□□ -0.92
SNF8-215ENST00000515572 RPL27AP46776 148 aaKnown RBP9.33□□□□□ -0.92
SNF8-215ENST00000515572 UBE2MP61081 183 aaKnown RBP9.33□□□□□ -0.92
SNF8-215ENST00000515572 SRPXP78539 464 aa9.33□□□□□ -0.92
SNF8-215ENST00000515572 ASAH1Q13510 395 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms