RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 RPEQ96AT9 228 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 HARBI1Q96MB7 349 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 RAB40CQ96S21 281 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 NAV3Q8IVL0 2385 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 UNC79Q9P2D8 2635 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 CEBPZOSA8MTT3 80 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 A8MXK9 166 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 TXNL1O43396 289 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 FOXH1O75593 365 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 METTL15P1P0C7V9 234 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 SAA1P0DJI8 122 aaPredicted RBP7.39□□□□□ -1.23
CPNE4-213ENST00000515418 MMP9P14780 707 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 PAX1P15863 534 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 HOXB4P17483 251 aaPredicted RBP7.39□□□□□ -1.23
CPNE4-213ENST00000515418 IL3RAP26951 378 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 CNTFRP26992 372 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 HTR1DP28221 377 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 DVL1P1P54792 670 aaPredicted RBP7.39□□□□□ -1.23
CPNE4-213ENST00000515418 RPL23AP62750 156 aaKnown RBP7.39□□□□□ -1.23
CPNE4-213ENST00000515418 SSX2Q16385 188 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 FAM71F2Q6NXP2 309 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 DYNAPQ8N1N2 210 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 MAPK1IP1LQ8NDC0 245 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 DTD1Q8TEA8 209 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 SMIM8Q96KF7 97 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 TBX15Q96SF7 602 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 MS4A7Q9GZW8 240 aaPredicted RBP7.39□□□□□ -1.23
CPNE4-213ENST00000515418 DPM3Q9P2X0 92 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 UBQLN2Q9UHD9 624 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 WASHC3Q9Y3C0 194 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 KPTNQ9Y664 436 aa7.39□□□□□ -1.23
CPNE4-213ENST00000515418 TLN2Q9Y4G6 2542 aa7.38□□□□□ -1.23
CPNE4-213ENST00000515418 ODF3BA8MYP8 253 aa7.38□□□□□ -1.23
CPNE4-213ENST00000515418 FAM90A26D6RGX4 464 aa7.38□□□□□ -1.23
CPNE4-213ENST00000515418 IGLV2-23P01705 113 aa7.38□□□□□ -1.23
CPNE4-213ENST00000515418 IL6RP08887 468 aaPredicted RBP7.38□□□□□ -1.23
CPNE4-213ENST00000515418 DYNLT3P51808 116 aa7.38□□□□□ -1.23
CPNE4-213ENST00000515418 ARL16Q0P5N6 197 aa7.38□□□□□ -1.23
CPNE4-213ENST00000515418 PJVKQ0ZLH3 352 aa7.38□□□□□ -1.23
CPNE4-213ENST00000515418 HNF4GQ14541 408 aa7.38□□□□□ -1.23
CPNE4-213ENST00000515418 TMEM177Q53S58 311 aa7.38□□□□□ -1.23
CPNE4-213ENST00000515418 TPTE2P1Q5T6R2 138 aa7.38□□□□□ -1.23
CPNE4-213ENST00000515418 DHRS7BQ6IAN0 325 aaPredicted RBP7.38□□□□□ -1.23
CPNE4-213ENST00000515418 KIR3DL3Q8N743 410 aa7.38□□□□□ -1.23
CPNE4-213ENST00000515418 OR4C13Q8NGP0 309 aa7.38□□□□□ -1.23
CPNE4-213ENST00000515418 OR5C1Q8NGR4 320 aa7.38□□□□□ -1.23
CPNE4-213ENST00000515418 OSR1Q8TAX0 266 aaPredicted RBP7.38□□□□□ -1.23
CPNE4-213ENST00000515418 HINT2Q9BX68 163 aa7.38□□□□□ -1.23
CPNE4-213ENST00000515418 UNKLQ9H9P5 680 aaKnown RBP7.38□□□□□ -1.23
CPNE4-213ENST00000515418 NUP50Q9UKX7 468 aa7.38□□□□□ -1.23
CPNE4-213ENST00000515418 RFNGQ9Y644 331 aa7.38□□□□□ -1.23
CPNE4-213ENST00000515418 WSB1Q9Y6I7 421 aa7.38□□□□□ -1.23
CPNE4-213ENST00000515418 PDZD2O15018 2839 aa7.38□□□□□ -1.23
CPNE4-213ENST00000515418 ITPR3Q14573 2671 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 IGHV3OR16-10A0A075B7F0 116 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 A0A1W2PPI3 338 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 LEUTXA8MZ59 168 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 UPK2O00526 184 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 TAAR5O14804 337 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 TIMM23O14925 209 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 SLC25A17O43808 307 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 FBXO24O75426 580 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 RRASP10301 218 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 MC5RP33032 325 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 UBA52P62987 128 aaKnown RBP7.37□□□□□ -1.23
CPNE4-213ENST00000515418 POU2AF1Q16633 256 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 FBLN7Q53RD9 439 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 HAPLN4Q86UW8 402 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 PDPNQ86YL7 162 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 BAP18Q8IXM2 172 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 TMED6Q8WW62 240 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 SLC25A31Q9H0C2 315 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 TPSG1Q9NRR2 321 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 AMMECR1Q9Y4X0 333 aaPredicted RBP7.37□□□□□ -1.23
CPNE4-213ENST00000515418 OR51B2Q9Y5P1 312 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 CREBBPQ92793 2442 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 FAM90A9PA6NNJ1 464 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 C15orf61A6NNL5 157 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 E7EUB6 86 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 MED6O75586 246 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 USF1P22415 310 aaPredicted RBP7.37□□□□□ -1.23
CPNE4-213ENST00000515418 RAB13P51153 203 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 SPCS3P61009 180 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 AARDQ4LEZ3 155 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 PUSL1Q8N0Z8 303 aaKnown RBP7.37□□□□□ -1.23
CPNE4-213ENST00000515418 SCARB1Q8WTV0 552 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 OR4C12Q96R67 309 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 TMEM14BQ9NUH8 114 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 TCF19Q9Y242 345 aa7.37□□□□□ -1.23
CPNE4-213ENST00000515418 POLR3KQ9Y2Y1 108 aaPredicted RBP7.37□□□□□ -1.23
CPNE4-213ENST00000515418 TEX50A0A1B0GTY4 177 aa7.36□□□□□ -1.23
CPNE4-213ENST00000515418 TEX46H3BTG2 121 aa7.36□□□□□ -1.23
CPNE4-213ENST00000515418 ATP6V1G1O75348 118 aa7.36□□□□□ -1.23
CPNE4-213ENST00000515418 KBTBD11O94819 623 aa7.36□□□□□ -1.23
CPNE4-213ENST00000515418 SULT1A1P50225 295 aa7.36□□□□□ -1.23
CPNE4-213ENST00000515418 LGALS4P56470 323 aa7.36□□□□□ -1.23
CPNE4-213ENST00000515418 DSCR9P59020 149 aa7.36□□□□□ -1.23
CPNE4-213ENST00000515418 TAS2R30P59541 319 aa7.36□□□□□ -1.23
CPNE4-213ENST00000515418 HSPE1P61604 102 aaKnown RBP7.36□□□□□ -1.23
CPNE4-213ENST00000515418 PAX8Q06710 450 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms