RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 Q6ZS49 121 aa4.33□□□□□ -1.72
LDHBP3-201ENST00000514909 TMPPEQ6ZT21 453 aa4.33□□□□□ -1.72
LDHBP3-201ENST00000514909 DYDC1Q8WWB3 177 aa4.33□□□□□ -1.72
LDHBP3-201ENST00000514909 HIST1H2BAQ96A08 127 aa4.33□□□□□ -1.72
LDHBP3-201ENST00000514909 ABCG5Q9H222 651 aa4.33□□□□□ -1.72
LDHBP3-201ENST00000514909 CISHQ9NSE2 258 aa4.33□□□□□ -1.72
LDHBP3-201ENST00000514909 SLC23A2Q9UGH3 650 aa4.33□□□□□ -1.72
LDHBP3-201ENST00000514909 TMEM56-RWDD3S4R434 201 aa4.33□□□□□ -1.72
LDHBP3-201ENST00000514909 DICER1Q9UPY3 1922 aaKnown RBP4.33□□□□□ -1.72
LDHBP3-201ENST00000514909 HECW2Q9P2P5 1572 aa4.32□□□□□ -1.72
LDHBP3-201ENST00000514909 ROBO3Q96MS0 1386 aa4.32□□□□□ -1.72
LDHBP3-201ENST00000514909 C9JCJ5 164 aa4.32□□□□□ -1.72
LDHBP3-201ENST00000514909 C1QBP02746 253 aa4.32□□□□□ -1.72
LDHBP3-201ENST00000514909 IDO1P14902 403 aa4.32□□□□□ -1.72
LDHBP3-201ENST00000514909 KRTAP13-2Q52LG2 175 aa4.32□□□□□ -1.72
LDHBP3-201ENST00000514909 TMEM136Q6ZRR5 245 aa4.32□□□□□ -1.72
LDHBP3-201ENST00000514909 GRINAQ7Z429 371 aa4.32□□□□□ -1.72
LDHBP3-201ENST00000514909 OR4K13Q8NH42 304 aa4.32□□□□□ -1.72
LDHBP3-201ENST00000514909 RSPO3Q9BXY4 272 aaPredicted RBP4.32□□□□□ -1.72
LDHBP3-201ENST00000514909 BATF3Q9NR55 127 aa4.32□□□□□ -1.72
LDHBP3-201ENST00000514909 MARCOQ9UEW3 520 aaPredicted RBP4.32□□□□□ -1.72
LDHBP3-201ENST00000514909 OR5V1Q9UGF6 321 aa4.32□□□□□ -1.72
LDHBP3-201ENST00000514909 U3KQK5 164 aa4.32□□□□□ -1.72
LDHBP3-201ENST00000514909 CHD5Q8TDI0 1954 aa4.32□□□□□ -1.72
LDHBP3-201ENST00000514909 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
LDHBP3-201ENST00000514909 PIRO00625 290 aa4.31□□□□□ -1.72
LDHBP3-201ENST00000514909 LECT2O14960 151 aa4.31□□□□□ -1.72
LDHBP3-201ENST00000514909 NBEAP1P0C6P0 100 aa4.31□□□□□ -1.72
LDHBP3-201ENST00000514909 NPPCP23582 126 aa4.31□□□□□ -1.72
LDHBP3-201ENST00000514909 RAB4BP61018 213 aa4.31□□□□□ -1.72
LDHBP3-201ENST00000514909 TBPL1P62380 186 aa4.31□□□□□ -1.72
LDHBP3-201ENST00000514909 IBA57Q5T440 356 aaKnown RBP4.31□□□□□ -1.72
LDHBP3-201ENST00000514909 STX19Q8N4C7 294 aa4.31□□□□□ -1.72
LDHBP3-201ENST00000514909 RNF182Q8N6D2 247 aa4.31□□□□□ -1.72
LDHBP3-201ENST00000514909 NMNAT3Q96T66 252 aa4.31□□□□□ -1.72
LDHBP3-201ENST00000514909 C20orf27Q9GZN8 174 aa4.31□□□□□ -1.72
LDHBP3-201ENST00000514909 NDUFAF1Q9Y375 327 aa4.31□□□□□ -1.72
LDHBP3-201ENST00000514909 TICRRQ7Z2Z1 1910 aa4.31□□□□□ -1.72
LDHBP3-201ENST00000514909 A0A0B4J2C4 111 aa4.3□□□□□ -1.72
LDHBP3-201ENST00000514909 TRAPPC13A5PLN9 417 aa4.3□□□□□ -1.72
LDHBP3-201ENST00000514909 GPR31O00270 319 aa4.3□□□□□ -1.72
LDHBP3-201ENST00000514909 SLC17A3O00476 420 aa4.3□□□□□ -1.72
LDHBP3-201ENST00000514909 SLC25A20O43772 301 aa4.3□□□□□ -1.72
LDHBP3-201ENST00000514909 ZNF682O95780 498 aa4.3□□□□□ -1.72
LDHBP3-201ENST00000514909 C8GP07360 202 aa4.3□□□□□ -1.72
LDHBP3-201ENST00000514909 CRABP2P29373 138 aa4.3□□□□□ -1.72
LDHBP3-201ENST00000514909 KRTAP12-2P59991 146 aa4.3□□□□□ -1.72
LDHBP3-201ENST00000514909 AMTNQ6UX39 209 aa4.3□□□□□ -1.72
LDHBP3-201ENST00000514909 OR13C8Q8NGS7 320 aa4.3□□□□□ -1.72
LDHBP3-201ENST00000514909 MRPL30Q8TCC3 161 aaKnown RBP4.3□□□□□ -1.72
LDHBP3-201ENST00000514909 GPR146Q96CH1 333 aa4.3□□□□□ -1.72
LDHBP3-201ENST00000514909 ERMAPQ96PL5 475 aaPredicted RBP4.3□□□□□ -1.72
LDHBP3-201ENST00000514909 ZNF443Q9Y2A4 671 aaPredicted RBP4.3□□□□□ -1.72
LDHBP3-201ENST00000514909 SLC35A3Q9Y2D2 325 aa4.3□□□□□ -1.72
LDHBP3-201ENST00000514909 A0A1W2PQ67 120 aa4.29□□□□□ -1.72
LDHBP3-201ENST00000514909 FUOMA2VDF0 154 aa4.29□□□□□ -1.72
LDHBP3-201ENST00000514909 IFNA14P01570 189 aa4.29□□□□□ -1.72
LDHBP3-201ENST00000514909 CRHP06850 196 aa4.29□□□□□ -1.72
LDHBP3-201ENST00000514909 ERP29P30040 261 aaKnown RBP4.29□□□□□ -1.72
LDHBP3-201ENST00000514909 TSPEAR-AS2P59090 65 aa4.29□□□□□ -1.72
LDHBP3-201ENST00000514909 LY6EQ16553 131 aa4.29□□□□□ -1.72
LDHBP3-201ENST00000514909 AKR1C8PQ5T2L2 129 aa4.29□□□□□ -1.72
LDHBP3-201ENST00000514909 ZNF283Q8N7M2 679 aa4.29□□□□□ -1.72
LDHBP3-201ENST00000514909 RNASE6Q93091 150 aaKnown RBP4.29□□□□□ -1.72
LDHBP3-201ENST00000514909 UPK3BQ9BT76 320 aa4.29□□□□□ -1.72
LDHBP3-201ENST00000514909 WDR61Q9GZS3 305 aaKnown RBP4.29□□□□□ -1.72
LDHBP3-201ENST00000514909 SH3BGRL3Q9H299 93 aa4.29□□□□□ -1.72
LDHBP3-201ENST00000514909 PRNDQ9UKY0 176 aa4.29□□□□□ -1.72
LDHBP3-201ENST00000514909 SSH2Q76I76 1423 aa4.29□□□□□ -1.72
LDHBP3-201ENST00000514909 TRBV20OR9-2A0A075B6H5 130 aa4.28□□□□□ -1.72
LDHBP3-201ENST00000514909 hCG_1818297A0A087WSY0 165 aa4.28□□□□□ -1.72
LDHBP3-201ENST00000514909 A0A0J9YY10 115 aa4.28□□□□□ -1.72
LDHBP3-201ENST00000514909 A0A1B0GX78 115 aa4.28□□□□□ -1.72
LDHBP3-201ENST00000514909 A8MT66 165 aa4.28□□□□□ -1.72
LDHBP3-201ENST00000514909 HMGB3O15347 200 aaKnown RBP4.28□□□□□ -1.72
LDHBP3-201ENST00000514909 PLA2G10O15496 165 aa4.28□□□□□ -1.72
LDHBP3-201ENST00000514909 SRP19P09132 144 aaKnown RBP4.28□□□□□ -1.72
LDHBP3-201ENST00000514909 RBP1P09455 135 aa4.28□□□□□ -1.72
LDHBP3-201ENST00000514909 FOXA1P55317 472 aa4.28□□□□□ -1.72
LDHBP3-201ENST00000514909 KLF3P57682 345 aaPredicted RBP4.28□□□□□ -1.72
LDHBP3-201ENST00000514909 DEFA1P59665 94 aa4.28□□□□□ -1.72
LDHBP3-201ENST00000514909 DHRS2Q13268 280 aa4.28□□□□□ -1.72
LDHBP3-201ENST00000514909 LGALS9BQ3B8N2 356 aa4.28□□□□□ -1.72
LDHBP3-201ENST00000514909 ZNF660Q6AZW8 331 aaPredicted RBP4.28□□□□□ -1.72
LDHBP3-201ENST00000514909 LGALS9CQ6DKI2 356 aa4.28□□□□□ -1.72
LDHBP3-201ENST00000514909 C12orf45Q8N5I9 185 aaPredicted RBP4.28□□□□□ -1.72
LDHBP3-201ENST00000514909 FNDC9Q8TBE3 224 aa4.28□□□□□ -1.72
LDHBP3-201ENST00000514909 LMX1AQ8TE12 382 aa4.28□□□□□ -1.72
LDHBP3-201ENST00000514909 CCDC90BQ9GZT6 254 aa4.28□□□□□ -1.72
LDHBP3-201ENST00000514909 C11orf1Q9H5F2 150 aa4.28□□□□□ -1.72
LDHBP3-201ENST00000514909 LYRM2Q9NU23 88 aaPredicted RBP4.28□□□□□ -1.72
LDHBP3-201ENST00000514909 FBXL12Q9NXK8 326 aa4.28□□□□□ -1.72
LDHBP3-201ENST00000514909 SNX12Q9UMY4 172 aa4.28□□□□□ -1.72
LDHBP3-201ENST00000514909 YTHDC2Q9H6S0 1430 aaKnown RBP4.28□□□□□ -1.72
LDHBP3-201ENST00000514909 ADAMTSL1Q8N6G6 1762 aa4.27□□□□□ -1.73
LDHBP3-201ENST00000514909 DSCAML1Q8TD84 2053 aa4.27□□□□□ -1.73
LDHBP3-201ENST00000514909 NDUFB2O95178 105 aa4.27□□□□□ -1.73
LDHBP3-201ENST00000514909 ZNF705DP0CH99 300 aaPredicted RBP4.27□□□□□ -1.73
LDHBP3-201ENST00000514909 SMIM10L2AP0DMW4 78 aa4.27□□□□□ -1.73
LDHBP3-201ENST00000514909 SMIM10L2BP0DMW5 78 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms