RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 OR2A7Q96R45 310 aa9.53□□□□□ -0.88
PDLIM5-220ENST00000514830 PHB2Q99623 299 aa9.53□□□□□ -0.88
PDLIM5-220ENST00000514830 RANBP3Q9H6Z4 567 aaPredicted RBP9.53□□□□□ -0.88
PDLIM5-220ENST00000514830 KIAA1456Q9P272 454 aa9.53□□□□□ -0.88
PDLIM5-220ENST00000514830 SIGLEC9Q9Y336 463 aa9.53□□□□□ -0.88
PDLIM5-220ENST00000514830 MMP24Q9Y5R2 645 aa9.53□□□□□ -0.88
PDLIM5-220ENST00000514830 SLC25A17O43808 307 aa9.52□□□□□ -0.89
PDLIM5-220ENST00000514830 GPR137BO60478 399 aa9.52□□□□□ -0.89
PDLIM5-220ENST00000514830 KRASP01116 189 aa9.52□□□□□ -0.89
PDLIM5-220ENST00000514830 SLC25A6P12236 298 aa9.52□□□□□ -0.89
PDLIM5-220ENST00000514830 HLA-GP17693 338 aa9.52□□□□□ -0.89
PDLIM5-220ENST00000514830 CNTFRP26992 372 aa9.52□□□□□ -0.89
PDLIM5-220ENST00000514830 MAS1LP35410 378 aa9.52□□□□□ -0.89
PDLIM5-220ENST00000514830 RAB25P57735 213 aa9.52□□□□□ -0.89
PDLIM5-220ENST00000514830 UBA52P62987 128 aaKnown RBP9.52□□□□□ -0.89
PDLIM5-220ENST00000514830 LY6EQ16553 131 aa9.52□□□□□ -0.89
PDLIM5-220ENST00000514830 TATDN3Q17R31 274 aa9.52□□□□□ -0.89
PDLIM5-220ENST00000514830 MRGPRG-AS1Q2M3A8 158 aa9.52□□□□□ -0.89
PDLIM5-220ENST00000514830 AARDQ4LEZ3 155 aa9.52□□□□□ -0.89
PDLIM5-220ENST00000514830 NMSQ5H8A3 153 aa9.52□□□□□ -0.89
PDLIM5-220ENST00000514830 OR4A47Q6IF82 309 aa9.52□□□□□ -0.89
PDLIM5-220ENST00000514830 PPP1R27Q86WC6 154 aa9.52□□□□□ -0.89
PDLIM5-220ENST00000514830 TMEM219Q86XT9 240 aa9.52□□□□□ -0.89
PDLIM5-220ENST00000514830 C12orf45Q8N5I9 185 aaPredicted RBP9.52□□□□□ -0.89
PDLIM5-220ENST00000514830 SLC35G3Q8N808 338 aa9.52□□□□□ -0.89
PDLIM5-220ENST00000514830 OR52B4Q8NGK2 314 aa9.52□□□□□ -0.89
PDLIM5-220ENST00000514830 SEC22CQ9BRL7 303 aa9.52□□□□□ -0.89
PDLIM5-220ENST00000514830 BEX1Q9HBH7 125 aa9.52□□□□□ -0.89
PDLIM5-220ENST00000514830 COA4Q9NYJ1 87 aa9.52□□□□□ -0.89
PDLIM5-220ENST00000514830 CACFD1Q9UGQ2 172 aa9.52□□□□□ -0.89
PDLIM5-220ENST00000514830 ZNF580Q9UK33 172 aa9.52□□□□□ -0.89
PDLIM5-220ENST00000514830 TMED3Q9Y3Q3 217 aa9.52□□□□□ -0.89
PDLIM5-220ENST00000514830 TET2Q6N021 2002 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-220ENST00000514830 NCBP2LA6PVI3 153 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-220ENST00000514830 UPK2O00526 184 aa9.51□□□□□ -0.89
PDLIM5-220ENST00000514830 PLXNB1O43157 2135 aa9.51□□□□□ -0.89
PDLIM5-220ENST00000514830 G6PCP35575 357 aa9.51□□□□□ -0.89
PDLIM5-220ENST00000514830 H2BFWTQ7Z2G1 175 aa9.51□□□□□ -0.89
PDLIM5-220ENST00000514830 FOXRED2Q8IWF2 684 aa9.51□□□□□ -0.89
PDLIM5-220ENST00000514830 MMD2Q8IY49 270 aa9.51□□□□□ -0.89
PDLIM5-220ENST00000514830 Q8N2B8 174 aa9.51□□□□□ -0.89
PDLIM5-220ENST00000514830 DMBX1Q8NFW5 382 aa9.51□□□□□ -0.89
PDLIM5-220ENST00000514830 CASTOR1Q8WTX7 329 aa9.51□□□□□ -0.89
PDLIM5-220ENST00000514830 RRNAD1Q96FB5 475 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-220ENST00000514830 RASL11BQ9BPW5 248 aa9.51□□□□□ -0.89
PDLIM5-220ENST00000514830 TMEM140Q9NV12 185 aa9.51□□□□□ -0.89
PDLIM5-220ENST00000514830 METTL1Q9UBP6 276 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-220ENST00000514830 A0A1B0GU03 582 aa9.5□□□□□ -0.89
PDLIM5-220ENST00000514830 TRIM77I1YAP6 450 aa9.5□□□□□ -0.89
PDLIM5-220ENST00000514830 IGHG2P01859 326 aa9.5□□□□□ -0.89
PDLIM5-220ENST00000514830 AKR1C2P52895 323 aa9.5□□□□□ -0.89
PDLIM5-220ENST00000514830 RELBQ01201 579 aa9.5□□□□□ -0.89
PDLIM5-220ENST00000514830 PRSS8Q16651 343 aa9.5□□□□□ -0.89
PDLIM5-220ENST00000514830 PDLIM3Q53GG5 364 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-220ENST00000514830 LIN54Q6MZP7 749 aa9.5□□□□□ -0.89
PDLIM5-220ENST00000514830 ZNF562Q6V9R5 426 aa9.5□□□□□ -0.89
PDLIM5-220ENST00000514830 Q6ZNX1 250 aa9.5□□□□□ -0.89
PDLIM5-220ENST00000514830 LYZL2Q7Z4W2 148 aa9.5□□□□□ -0.89
PDLIM5-220ENST00000514830 ZNF429Q86V71 674 aa9.5□□□□□ -0.89
PDLIM5-220ENST00000514830 VKORC1L1Q8N0U8 176 aa9.5□□□□□ -0.89
PDLIM5-220ENST00000514830 RBMXL1Q96E39 390 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-220ENST00000514830 NPFFR1Q9GZQ6 430 aa9.5□□□□□ -0.89
PDLIM5-220ENST00000514830 OR51J1Q9H342 316 aa9.5□□□□□ -0.89
PDLIM5-220ENST00000514830 FBXL15Q9H469 300 aa9.5□□□□□ -0.89
PDLIM5-220ENST00000514830 TMEM14BQ9NUH8 114 aa9.5□□□□□ -0.89
PDLIM5-220ENST00000514830 FKBP11Q9NYL4 201 aa9.5□□□□□ -0.89
PDLIM5-220ENST00000514830 PRR13Q9NZ81 148 aa9.5□□□□□ -0.89
PDLIM5-220ENST00000514830 PRNDQ9UKY0 176 aa9.5□□□□□ -0.89
PDLIM5-220ENST00000514830 ZNF257Q9Y2Q1 563 aa9.5□□□□□ -0.89
PDLIM5-220ENST00000514830 ALG5Q9Y673 324 aa9.5□□□□□ -0.89
PDLIM5-220ENST00000514830 CUBNO60494 3623 aa9.5□□□□□ -0.89
PDLIM5-220ENST00000514830 FBN1P35555 2871 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-220ENST00000514830 A0A0G2JRQ6 117 aa9.49□□□□□ -0.89
PDLIM5-220ENST00000514830 KCNAB3O43448 404 aa9.49□□□□□ -0.89
PDLIM5-220ENST00000514830 TSPAN9O75954 239 aa9.49□□□□□ -0.89
PDLIM5-220ENST00000514830 CRIP2P52943 208 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-220ENST00000514830 RPL8P62917 257 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-220ENST00000514830 SSBP2P81877 361 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-220ENST00000514830 GPR146Q96CH1 333 aa9.49□□□□□ -0.89
PDLIM5-220ENST00000514830 PRSS22Q9GZN4 317 aa9.49□□□□□ -0.89
PDLIM5-220ENST00000514830 ZNF430Q9H8G1 570 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-220ENST00000514830 TPSG1Q9NRR2 321 aa9.49□□□□□ -0.89
PDLIM5-220ENST00000514830 FOXA2Q9Y261 457 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-220ENST00000514830 IGHV7-81A0A0B4J1V7 117 aa9.48□□□□□ -0.89
PDLIM5-220ENST00000514830 FAM181BA6NEQ2 426 aa9.48□□□□□ -0.89
PDLIM5-220ENST00000514830 C15orf61A6NNL5 157 aa9.48□□□□□ -0.89
PDLIM5-220ENST00000514830 FCN1O00602 326 aa9.48□□□□□ -0.89
PDLIM5-220ENST00000514830 PITX3O75364 302 aa9.48□□□□□ -0.89
PDLIM5-220ENST00000514830 SNAPC5O75971 98 aa9.48□□□□□ -0.89
PDLIM5-220ENST00000514830 NDUFA7O95182 113 aa9.48□□□□□ -0.89
PDLIM5-220ENST00000514830 IFNA21P01568 189 aa9.48□□□□□ -0.89
PDLIM5-220ENST00000514830 OR9G9P0C7N8 305 aa9.48□□□□□ -0.89
PDLIM5-220ENST00000514830 SULT1A3P0DMM9 295 aa9.48□□□□□ -0.89
PDLIM5-220ENST00000514830 SULT1A4P0DMN0 295 aa9.48□□□□□ -0.89
PDLIM5-220ENST00000514830 COMPP49747 757 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-220ENST00000514830 SMCO1Q147U7 214 aa9.48□□□□□ -0.89
PDLIM5-220ENST00000514830 PLGLAQ15195 96 aa9.48□□□□□ -0.89
PDLIM5-220ENST00000514830 GGNBP1Q5YKI7 109 aa9.48□□□□□ -0.89
PDLIM5-220ENST00000514830 THOC7Q6I9Y2 204 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-220ENST00000514830 SSX9Q7RTT3 188 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms