RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 C9orf85Q96MD7 179 aa5.97□□□□□ -1.45
NIPBL-208ENST00000514335 POLR2J2Q9GZM3 115 aaKnown RBP5.97□□□□□ -1.45
NIPBL-208ENST00000514335 A0A1W2PPM0 123 aa5.97□□□□□ -1.45
NIPBL-208ENST00000514335 ARRDC5A6NEK1 342 aa5.97□□□□□ -1.45
NIPBL-208ENST00000514335 REM1O75628 298 aa5.97□□□□□ -1.45
NIPBL-208ENST00000514335 GPX1P07203 203 aa5.97□□□□□ -1.45
NIPBL-208ENST00000514335 H2BFMP0C1H6 154 aa5.97□□□□□ -1.45
NIPBL-208ENST00000514335 GALR1P47211 349 aa5.97□□□□□ -1.45
NIPBL-208ENST00000514335 GAGE2BQ13066 116 aa5.97□□□□□ -1.45
NIPBL-208ENST00000514335 GAGE2EQ4V326 116 aa5.97□□□□□ -1.45
NIPBL-208ENST00000514335 STAC2Q6ZMT1 411 aa5.97□□□□□ -1.45
NIPBL-208ENST00000514335 SPATA12Q7Z6I5 190 aa5.97□□□□□ -1.45
NIPBL-208ENST00000514335 SMRP1Q8NCR6 262 aa5.97□□□□□ -1.45
NIPBL-208ENST00000514335 MAL2Q969L2 176 aa5.97□□□□□ -1.45
NIPBL-208ENST00000514335 TMEM242Q9NWH2 141 aa5.97□□□□□ -1.45
NIPBL-208ENST00000514335 PLA2G2EQ9NZK7 142 aa5.97□□□□□ -1.45
NIPBL-208ENST00000514335 COMMD9Q9P000 198 aa5.97□□□□□ -1.45
NIPBL-208ENST00000514335 GAGE2DQ9UEU5 116 aa5.97□□□□□ -1.45
NIPBL-208ENST00000514335 KIAA1549LQ6ZVL6 1849 aa5.97□□□□□ -1.45
NIPBL-208ENST00000514335 A6NDN8 102 aa5.96□□□□□ -1.45
NIPBL-208ENST00000514335 TNFSF9P41273 254 aa5.96□□□□□ -1.45
NIPBL-208ENST00000514335 NMUP48645 174 aa5.96□□□□□ -1.45
NIPBL-208ENST00000514335 MRPS6P82932 125 aaKnown RBP5.96□□□□□ -1.45
NIPBL-208ENST00000514335 TEX36Q5VZQ5 186 aa5.96□□□□□ -1.45
NIPBL-208ENST00000514335 TRNP1Q6NT89 227 aa5.96□□□□□ -1.45
NIPBL-208ENST00000514335 ACP7Q6ZNF0 438 aa5.96□□□□□ -1.45
NIPBL-208ENST00000514335 PARP12Q9H0J9 701 aaKnown RBP5.96□□□□□ -1.45
NIPBL-208ENST00000514335 KLF12Q9Y4X4 402 aa5.96□□□□□ -1.45
NIPBL-208ENST00000514335 IER3IP1Q9Y5U9 82 aa5.96□□□□□ -1.45
NIPBL-208ENST00000514335 A0A1W2PP11 408 aa5.96□□□□□ -1.46
NIPBL-208ENST00000514335 SHISA3A0PJX4 238 aa5.96□□□□□ -1.46
NIPBL-208ENST00000514335 GABARAPH6UMI1 98 aa5.96□□□□□ -1.46
NIPBL-208ENST00000514335 LMX1BO60663 402 aa5.96□□□□□ -1.46
NIPBL-208ENST00000514335 LINC00271P0C7V0 271 aa5.96□□□□□ -1.46
NIPBL-208ENST00000514335 HIST1H1DP16402 221 aaKnown RBP5.96□□□□□ -1.46
NIPBL-208ENST00000514335 Q0VG73 95 aa5.96□□□□□ -1.46
NIPBL-208ENST00000514335 DTWD1Q8N5C7 304 aa5.96□□□□□ -1.46
NIPBL-208ENST00000514335 PRR26Q8N8Z3 221 aa5.96□□□□□ -1.46
NIPBL-208ENST00000514335 OR13H1Q8NG92 308 aa5.96□□□□□ -1.46
NIPBL-208ENST00000514335 RNF128Q8TEB7 428 aa5.96□□□□□ -1.46
NIPBL-208ENST00000514335 PPP1R1CQ8WVI7 109 aa5.96□□□□□ -1.46
NIPBL-208ENST00000514335 SMCHD1A6NHR9 2005 aa5.96□□□□□ -1.46
NIPBL-208ENST00000514335 DOCK6Q96HP0 2047 aa5.96□□□□□ -1.46
NIPBL-208ENST00000514335 KIAA1549Q9HCM3 1950 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 LINC01553A4QN01 128 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 H3BRM9 83 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 CD55P08174 381 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 SCTP09683 121 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 SEC11BP0C7V7 166 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 FGF6P10767 208 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 DUTP33316 252 aaKnown RBP5.95□□□□□ -1.46
NIPBL-208ENST00000514335 LTBQ06643 244 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 ZNF718Q3SXZ3 478 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 PAGE3Q5JUK9 113 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 SLC35F2Q8IXU6 374 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 RTN4IP1Q8WWV3 396 aaPredicted RBP5.95□□□□□ -1.46
NIPBL-208ENST00000514335 PYGO2Q9BRQ0 406 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 MLST8Q9BVC4 326 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 ULBP3Q9BZM4 244 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 J3QQQ9 107 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 K7ENP7 123 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 SOD1P00441 154 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 CA2P00918 260 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 MT-ND6P03923 174 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 LINC00869P0C866 280 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 FSTP19883 344 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 RPS4Y1P22090 263 aaKnown RBP5.95□□□□□ -1.46
NIPBL-208ENST00000514335 SLC25A11Q02978 314 aaKnown RBP5.95□□□□□ -1.46
NIPBL-208ENST00000514335 Q71RC1 249 aaPredicted RBP5.95□□□□□ -1.46
NIPBL-208ENST00000514335 ZNF740Q8NDX6 193 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 OR10P1Q8NGE3 313 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 OR4C16Q8NGL9 310 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 OR10G8Q8NGN5 311 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 NIPSNAP3BQ9BS92 247 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 A0A1W2PS29 197 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 TCRBV7S3A2A0A539 114 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 C15orf61A6NNL5 157 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 F8W1H4 67 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 AVPP01185 164 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 IGLL1P15814 213 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 BCL3P20749 454 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 GCSHP23434 173 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 UBE2E1P51965 193 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 LINC00310P59036 64 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 PMAIP1Q13794 54 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 IHHQ14623 411 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 LYRM7Q5U5X0 104 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 UBE2E3Q969T4 207 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 UBE2E2Q96LR5 201 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 SCGB3A2Q96PL1 93 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 ZNF670Q9BS34 389 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 GABARAPL1Q9H0R8 117 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 BANF2Q9H503 90 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 MANBALQ9NQG1 85 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 VSIG4Q9Y279 399 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 PYGO1Q9Y3Y4 419 aa5.95□□□□□ -1.46
NIPBL-208ENST00000514335 FNDC1Q4ZHG4 1894 aaPredicted RBP5.94□□□□□ -1.46
NIPBL-208ENST00000514335 TMED7-TICAM2A0A0A6YYA0 188 aa5.94□□□□□ -1.46
NIPBL-208ENST00000514335 NDUFB6O95139 128 aa5.94□□□□□ -1.46
NIPBL-208ENST00000514335 NGFP01138 241 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms