RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 C5orf64Q2M2E5 130 aa8.1□□□□□ -1.11
NEDD9-214ENST00000513989 TMEM268Q5VZI3 342 aa8.1□□□□□ -1.11
NEDD9-214ENST00000513989 PPP1R27Q86WC6 154 aa8.1□□□□□ -1.11
NEDD9-214ENST00000513989 FAM219AQ8IW50 185 aa8.1□□□□□ -1.11
NEDD9-214ENST00000513989 SELENOHQ8IZQ5 122 aaKnown RBP8.1□□□□□ -1.11
NEDD9-214ENST00000513989 Q8N6K4 173 aa8.1□□□□□ -1.11
NEDD9-214ENST00000513989 OR4A16Q8NH70 328 aa8.1□□□□□ -1.11
NEDD9-214ENST00000513989 CHPT1Q8WUD6 406 aa8.1□□□□□ -1.11
NEDD9-214ENST00000513989 MITD1Q8WV92 249 aa8.1□□□□□ -1.11
NEDD9-214ENST00000513989 RITA1Q96K30 269 aa8.1□□□□□ -1.11
NEDD9-214ENST00000513989 CHIAQ9BZP6 476 aa8.1□□□□□ -1.11
NEDD9-214ENST00000513989 SHPKQ9UHJ6 478 aa8.1□□□□□ -1.11
NEDD9-214ENST00000513989 TMED3Q9Y3Q3 217 aa8.1□□□□□ -1.11
NEDD9-214ENST00000513989 SRRM4A7MD48 611 aaKnown RBP8.09□□□□□ -1.11
NEDD9-214ENST00000513989 SSNA1O43805 119 aa8.09□□□□□ -1.11
NEDD9-214ENST00000513989 SLC25A17O43808 307 aa8.09□□□□□ -1.11
NEDD9-214ENST00000513989 GPR137BO60478 399 aa8.09□□□□□ -1.11
NEDD9-214ENST00000513989 NDUFA3O95167 84 aa8.09□□□□□ -1.11
NEDD9-214ENST00000513989 CNIH1O95406 144 aa8.09□□□□□ -1.11
NEDD9-214ENST00000513989 VSIG10L2P0DP72 767 aa8.09□□□□□ -1.11
NEDD9-214ENST00000513989 SPNP16150 400 aa8.09□□□□□ -1.11
NEDD9-214ENST00000513989 VDAC1P21796 283 aa8.09□□□□□ -1.11
NEDD9-214ENST00000513989 MAS1LP35410 378 aa8.09□□□□□ -1.11
NEDD9-214ENST00000513989 UBA52P62987 128 aaKnown RBP8.09□□□□□ -1.11
NEDD9-214ENST00000513989 POU2AF1Q16633 256 aa8.09□□□□□ -1.11
NEDD9-214ENST00000513989 SSX9Q7RTT3 188 aa8.09□□□□□ -1.11
NEDD9-214ENST00000513989 MMD2Q8IY49 270 aa8.09□□□□□ -1.11
NEDD9-214ENST00000513989 C12orf45Q8N5I9 185 aaPredicted RBP8.09□□□□□ -1.11
NEDD9-214ENST00000513989 LRTM2Q8N967 370 aa8.09□□□□□ -1.11
NEDD9-214ENST00000513989 LSM10Q969L4 123 aaKnown RBP8.09□□□□□ -1.11
NEDD9-214ENST00000513989 DUX5Q96PT3 197 aa8.09□□□□□ -1.11
NEDD9-214ENST00000513989 PRSS22Q9GZN4 317 aa8.09□□□□□ -1.11
NEDD9-214ENST00000513989 RANBP3Q9H6Z4 567 aaPredicted RBP8.09□□□□□ -1.11
NEDD9-214ENST00000513989 PLSCR3Q9NRY6 295 aa8.09□□□□□ -1.11
NEDD9-214ENST00000513989 BET1LQ9NYM9 111 aa8.09□□□□□ -1.11
NEDD9-214ENST00000513989 PRNDQ9UKY0 176 aa8.09□□□□□ -1.11
NEDD9-214ENST00000513989 SIGLEC9Q9Y336 463 aa8.09□□□□□ -1.11
NEDD9-214ENST00000513989 MMP24Q9Y5R2 645 aa8.09□□□□□ -1.11
NEDD9-214ENST00000513989 VWFP04275 2813 aa8.08□□□□□ -1.12
NEDD9-214ENST00000513989 FAM181BA6NEQ2 426 aa8.08□□□□□ -1.12
NEDD9-214ENST00000513989 KCNAB3O43448 404 aa8.08□□□□□ -1.12
NEDD9-214ENST00000513989 IGLV2-23P01705 113 aa8.08□□□□□ -1.12
NEDD9-214ENST00000513989 FGF2P09038 288 aa8.08□□□□□ -1.12
NEDD9-214ENST00000513989 SAA1P0DJI8 122 aaPredicted RBP8.08□□□□□ -1.12
NEDD9-214ENST00000513989 RPL8P62917 257 aaKnown RBP8.08□□□□□ -1.12
NEDD9-214ENST00000513989 TATDN3Q17R31 274 aa8.08□□□□□ -1.12
NEDD9-214ENST00000513989 ARSJQ5FYB0 599 aaPredicted RBP8.08□□□□□ -1.12
NEDD9-214ENST00000513989 C9orf152Q5JTZ5 239 aa8.08□□□□□ -1.12
NEDD9-214ENST00000513989 THOC7Q6I9Y2 204 aaKnown RBP8.08□□□□□ -1.12
NEDD9-214ENST00000513989 OR4A47Q6IF82 309 aa8.08□□□□□ -1.12
NEDD9-214ENST00000513989 ZNF562Q6V9R5 426 aa8.08□□□□□ -1.12
NEDD9-214ENST00000513989 VKORC1L1Q8N0U8 176 aa8.08□□□□□ -1.12
NEDD9-214ENST00000513989 C5orf56Q8N8D9 126 aa8.08□□□□□ -1.12
NEDD9-214ENST00000513989 Q8N9W7 124 aa8.08□□□□□ -1.12
NEDD9-214ENST00000513989 SEC22AQ96IW7 307 aa8.08□□□□□ -1.12
NEDD9-214ENST00000513989 CLCC1Q96S66 551 aa8.08□□□□□ -1.12
NEDD9-214ENST00000513989 SPIN2AQ99865 258 aa8.08□□□□□ -1.12
NEDD9-214ENST00000513989 SPIN2BQ9BPZ2 258 aa8.08□□□□□ -1.12
NEDD9-214ENST00000513989 SEC22CQ9BRL7 303 aa8.08□□□□□ -1.12
NEDD9-214ENST00000513989 COMMD5Q9GZQ3 224 aa8.08□□□□□ -1.12
NEDD9-214ENST00000513989 FBXL15Q9H469 300 aa8.08□□□□□ -1.12
NEDD9-214ENST00000513989 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.08□□□□□ -1.12
NEDD9-214ENST00000513989 TMEM140Q9NV12 185 aa8.08□□□□□ -1.12
NEDD9-214ENST00000513989 CMYA5Q8N3K9 4069 aa8.08□□□□□ -1.12
NEDD9-214ENST00000513989 A0A1B0GU03 582 aa8.07□□□□□ -1.12
NEDD9-214ENST00000513989 UPK2O00526 184 aa8.07□□□□□ -1.12
NEDD9-214ENST00000513989 KBTBD11O94819 623 aa8.07□□□□□ -1.12
NEDD9-214ENST00000513989 IGKV1-39P01597 117 aa8.07□□□□□ -1.12
NEDD9-214ENST00000513989 HLA-DRB1P01911 266 aa8.07□□□□□ -1.12
NEDD9-214ENST00000513989 IGKV1D-39P04432 117 aa8.07□□□□□ -1.12
NEDD9-214ENST00000513989 CRYGBP07316 175 aa8.07□□□□□ -1.12
NEDD9-214ENST00000513989 HOXB5P09067 269 aa8.07□□□□□ -1.12
NEDD9-214ENST00000513989 SULT1A3P0DMM9 295 aa8.07□□□□□ -1.12
NEDD9-214ENST00000513989 SULT1A4P0DMN0 295 aa8.07□□□□□ -1.12
NEDD9-214ENST00000513989 HLA-GP17693 338 aa8.07□□□□□ -1.12
NEDD9-214ENST00000513989 CNTFRP26992 372 aa8.07□□□□□ -1.12
NEDD9-214ENST00000513989 GNB1P62873 340 aa8.07□□□□□ -1.12
NEDD9-214ENST00000513989 TMEM267Q0VDI3 215 aaPredicted RBP8.07□□□□□ -1.12
NEDD9-214ENST00000513989 PRSS8Q16651 343 aa8.07□□□□□ -1.12
NEDD9-214ENST00000513989 ANKRD55Q3KP44 614 aa8.07□□□□□ -1.12
NEDD9-214ENST00000513989 LYZL2Q7Z4W2 148 aa8.07□□□□□ -1.12
NEDD9-214ENST00000513989 FOXRED2Q8IWF2 684 aa8.07□□□□□ -1.12
NEDD9-214ENST00000513989 MRPL41Q8IXM3 137 aaKnown RBP8.07□□□□□ -1.12
NEDD9-214ENST00000513989 PUSL1Q8N0Z8 303 aaKnown RBP8.07□□□□□ -1.12
NEDD9-214ENST00000513989 FAM71E2Q8N5Q1 922 aa8.07□□□□□ -1.12
NEDD9-214ENST00000513989 SLC35G3Q8N808 338 aa8.07□□□□□ -1.12
NEDD9-214ENST00000513989 OR52B4Q8NGK2 314 aa8.07□□□□□ -1.12
NEDD9-214ENST00000513989 TMEM167AQ8TBQ9 72 aa8.07□□□□□ -1.12
NEDD9-214ENST00000513989 PDCD10Q9BUL8 212 aa8.07□□□□□ -1.12
NEDD9-214ENST00000513989 GON7Q9BXV9 100 aa8.07□□□□□ -1.12
NEDD9-214ENST00000513989 OR51J1Q9H342 316 aa8.07□□□□□ -1.12
NEDD9-214ENST00000513989 ESM1Q9NQ30 184 aa8.07□□□□□ -1.12
NEDD9-214ENST00000513989 NOTCH1P46531 2555 aa8.07□□□□□ -1.12
NEDD9-214ENST00000513989 C13orf42A0A1B0GVH6 325 aa8.06□□□□□ -1.12
NEDD9-214ENST00000513989 C5orf51A6NDU8 294 aa8.06□□□□□ -1.12
NEDD9-214ENST00000513989 FAM25EA8MYX2 175 aa8.06□□□□□ -1.12
NEDD9-214ENST00000513989 FCN1O00602 326 aa8.06□□□□□ -1.12
NEDD9-214ENST00000513989 CHST1O43916 411 aa8.06□□□□□ -1.12
NEDD9-214ENST00000513989 SLC25A6P12236 298 aa8.06□□□□□ -1.12
NEDD9-214ENST00000513989 BLCAPP62952 87 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms