RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 ZNF688P0C7X2 276 aa5.1□□□□□ -1.59
CLDND1-229ENST00000513988 DEFB130BP0DP73 79 aa5.1□□□□□ -1.59
CLDND1-229ENST00000513988 DEFB130AP0DP74 79 aa5.1□□□□□ -1.59
CLDND1-229ENST00000513988 SLC2A5P22732 501 aa5.1□□□□□ -1.59
CLDND1-229ENST00000513988 ATP5G3P48201 142 aa5.1□□□□□ -1.59
CLDND1-229ENST00000513988 UBE2KP61086 200 aa5.1□□□□□ -1.59
CLDND1-229ENST00000513988 WHAMMP3Q1A5X7 153 aa5.1□□□□□ -1.59
CLDND1-229ENST00000513988 OR10K2Q6IF99 312 aa5.1□□□□□ -1.59
CLDND1-229ENST00000513988 GAPTQ8N292 157 aa5.1□□□□□ -1.59
CLDND1-229ENST00000513988 CBR4Q8N4T8 237 aa5.1□□□□□ -1.59
CLDND1-229ENST00000513988 DUSP18Q8NEJ0 188 aa5.1□□□□□ -1.59
CLDND1-229ENST00000513988 CPNE2Q96FN4 548 aaPredicted RBP5.1□□□□□ -1.59
CLDND1-229ENST00000513988 ROPN1BQ9BZX4 212 aaPredicted RBP5.1□□□□□ -1.59
CLDND1-229ENST00000513988 DPH3P1Q9H4G8 78 aa5.1□□□□□ -1.59
CLDND1-229ENST00000513988 SPACA1Q9HBV2 294 aa5.1□□□□□ -1.59
CLDND1-229ENST00000513988 ABRACLQ9P1F3 81 aa5.1□□□□□ -1.59
CLDND1-229ENST00000513988 LRRC42Q9Y546 428 aa5.1□□□□□ -1.59
CLDND1-229ENST00000513988 IGLV11-55A0A075B6I3 123 aa5.09□□□□□ -1.59
CLDND1-229ENST00000513988 ZNF670-ZNF695F2Z2N8 137 aa5.09□□□□□ -1.59
CLDND1-229ENST00000513988 M0R1X1 148 aa5.09□□□□□ -1.59
CLDND1-229ENST00000513988 GABRPO00591 440 aa5.09□□□□□ -1.59
CLDND1-229ENST00000513988 MRASO14807 208 aa5.09□□□□□ -1.59
CLDND1-229ENST00000513988 NUPL2O15504 423 aaKnown RBP5.09□□□□□ -1.59
CLDND1-229ENST00000513988 ST8SIA3O43173 380 aa5.09□□□□□ -1.59
CLDND1-229ENST00000513988 CA11O75493 328 aa5.09□□□□□ -1.59
CLDND1-229ENST00000513988 ISG15P05161 165 aa5.09□□□□□ -1.59
CLDND1-229ENST00000513988 AREGP15514 252 aa5.09□□□□□ -1.59
CLDND1-229ENST00000513988 PTBP1P26599 531 aaKnown RBP eCLIP5.09□□□□□ -1.59
CLDND1-229ENST00000513988 TMEM244Q5VVB8 128 aa5.09□□□□□ -1.59
CLDND1-229ENST00000513988 SPSB3Q6PJ21 355 aa5.09□□□□□ -1.59
CLDND1-229ENST00000513988 MMD2Q8IY49 270 aa5.09□□□□□ -1.59
CLDND1-229ENST00000513988 AQP11Q8NBQ7 271 aa5.09□□□□□ -1.59
CLDND1-229ENST00000513988 FCGR1BQ92637 280 aa5.09□□□□□ -1.59
CLDND1-229ENST00000513988 GNPNAT1Q96EK6 184 aaPredicted RBP5.09□□□□□ -1.59
CLDND1-229ENST00000513988 BSCL2Q96G97 398 aaPredicted RBP5.09□□□□□ -1.59
CLDND1-229ENST00000513988 GRAMD2BQ96HH9 432 aa5.09□□□□□ -1.59
CLDND1-229ENST00000513988 NSL1Q96IY1 281 aa5.09□□□□□ -1.59
CLDND1-229ENST00000513988 AGMATQ9BSE5 352 aa5.09□□□□□ -1.59
CLDND1-229ENST00000513988 CHAC1Q9BUX1 264 aa5.09□□□□□ -1.59
CLDND1-229ENST00000513988 H3BN98 237 aa5.08□□□□□ -1.6
CLDND1-229ENST00000513988 ITGB1BP1O14713 200 aa5.08□□□□□ -1.6
CLDND1-229ENST00000513988 CDRT1O95170 752 aa5.08□□□□□ -1.6
CLDND1-229ENST00000513988 RTL8BQ17RB0 113 aa5.08□□□□□ -1.6
CLDND1-229ENST00000513988 RRN3P1Q2M238 152 aa5.08□□□□□ -1.6
CLDND1-229ENST00000513988 KLK9Q2XQG4 91 aa5.08□□□□□ -1.6
CLDND1-229ENST00000513988 ACOT6Q3I5F7 207 aaPredicted RBP5.08□□□□□ -1.6
CLDND1-229ENST00000513988 RAB12Q6IQ22 244 aa5.08□□□□□ -1.6
CLDND1-229ENST00000513988 SLC35F2Q8IXU6 374 aa5.08□□□□□ -1.6
CLDND1-229ENST00000513988 Q8N814 137 aa5.08□□□□□ -1.6
CLDND1-229ENST00000513988 OR13C3Q8NGS6 347 aa5.08□□□□□ -1.6
CLDND1-229ENST00000513988 RBPMSQ93062 196 aaKnown RBP5.08□□□□□ -1.6
CLDND1-229ENST00000513988 RAB40CQ96S21 281 aa5.08□□□□□ -1.6
CLDND1-229ENST00000513988 METTL9Q9H1A3 318 aa5.08□□□□□ -1.6
CLDND1-229ENST00000513988 ARL8BQ9NVJ2 186 aa5.08□□□□□ -1.6
CLDND1-229ENST00000513988 GID8Q9NWU2 228 aa5.08□□□□□ -1.6
CLDND1-229ENST00000513988 IL36GQ9NZH8 169 aa5.08□□□□□ -1.6
CLDND1-229ENST00000513988 CACNG5Q9UF02 275 aa5.08□□□□□ -1.6
CLDND1-229ENST00000513988 KLK9Q9UKQ9 250 aa5.08□□□□□ -1.6
CLDND1-229ENST00000513988 AP3M1Q9Y2T2 418 aa5.08□□□□□ -1.6
CLDND1-229ENST00000513988 TRAV14DV4A0A0A6YYC5 116 aa5.07□□□□□ -1.6
CLDND1-229ENST00000513988 CCDC182A6NF36 153 aa5.07□□□□□ -1.6
CLDND1-229ENST00000513988 LYRM9A8MSI8 78 aa5.07□□□□□ -1.6
CLDND1-229ENST00000513988 B2RBV5 119 aa5.07□□□□□ -1.6
CLDND1-229ENST00000513988 PSCAO43653 123 aa5.07□□□□□ -1.6
CLDND1-229ENST00000513988 SULT1C4O75897 302 aa5.07□□□□□ -1.6
CLDND1-229ENST00000513988 CCNB2O95067 398 aa5.07□□□□□ -1.6
CLDND1-229ENST00000513988 YIF1AO95070 293 aa5.07□□□□□ -1.6
CLDND1-229ENST00000513988 SERPINA2P20848 420 aa5.07□□□□□ -1.6
CLDND1-229ENST00000513988 ATP6V1B2P21281 511 aa5.07□□□□□ -1.6
CLDND1-229ENST00000513988 CDKN1BP46527 198 aa5.07□□□□□ -1.6
CLDND1-229ENST00000513988 RPL27AP46776 148 aaKnown RBP5.07□□□□□ -1.6
CLDND1-229ENST00000513988 PSMD7P51665 324 aa5.07□□□□□ -1.6
CLDND1-229ENST00000513988 CCR9P51686 369 aa5.07□□□□□ -1.6
CLDND1-229ENST00000513988 OGFRL1Q5TC84 451 aaPredicted RBP5.07□□□□□ -1.6
CLDND1-229ENST00000513988 STXBP6Q8NFX7 210 aa5.07□□□□□ -1.6
CLDND1-229ENST00000513988 CIRBP-AS1Q8TBR5 109 aa5.07□□□□□ -1.6
CLDND1-229ENST00000513988 MRPL30Q8TCC3 161 aaKnown RBP5.07□□□□□ -1.6
CLDND1-229ENST00000513988 RXFP4Q8TDU9 374 aa5.07□□□□□ -1.6
CLDND1-229ENST00000513988 MCUR1Q96AQ8 359 aa5.07□□□□□ -1.6
CLDND1-229ENST00000513988 DGCR14Q96DF8 476 aaKnown RBP5.07□□□□□ -1.6
CLDND1-229ENST00000513988 UQCC2Q9BRT2 126 aa5.07□□□□□ -1.6
CLDND1-229ENST00000513988 C11orf54Q9H0W9 315 aaPredicted RBP5.07□□□□□ -1.6
CLDND1-229ENST00000513988 SEPSECSQ9HD40 501 aaKnown RBP5.07□□□□□ -1.6
CLDND1-229ENST00000513988 CMTM6Q9NX76 183 aa5.07□□□□□ -1.6
CLDND1-229ENST00000513988 MSRB1Q9NZV6 116 aa5.07□□□□□ -1.6
CLDND1-229ENST00000513988 THYN1Q9P016 225 aa5.07□□□□□ -1.6
CLDND1-229ENST00000513988 PEX16Q9Y5Y5 336 aa5.07□□□□□ -1.6
CLDND1-229ENST00000513988 TRAV9-2A0A087WT02 112 aa5.06□□□□□ -1.6
CLDND1-229ENST00000513988 TRAV26-1A0A087WT03 109 aa5.06□□□□□ -1.6
CLDND1-229ENST00000513988 UBE2QL1A1L167 161 aa5.06□□□□□ -1.6
CLDND1-229ENST00000513988 LRCOL1A6NCL2 159 aa5.06□□□□□ -1.6
CLDND1-229ENST00000513988 METTL15A6NJ78 407 aa5.06□□□□□ -1.6
CLDND1-229ENST00000513988 K7EQG2 157 aa5.06□□□□□ -1.6
CLDND1-229ENST00000513988 TNFRSF11BO00300 401 aa5.06□□□□□ -1.6
CLDND1-229ENST00000513988 RGS16O15492 202 aaPredicted RBP5.06□□□□□ -1.6
CLDND1-229ENST00000513988 SC5DO75845 299 aa5.06□□□□□ -1.6
CLDND1-229ENST00000513988 HMGN1P05114 100 aa5.06□□□□□ -1.6
CLDND1-229ENST00000513988 IL6RP08887 468 aaPredicted RBP5.06□□□□□ -1.6
CLDND1-229ENST00000513988 CDK10Q15131 360 aa5.06□□□□□ -1.6
CLDND1-229ENST00000513988 HMGN3Q15651 99 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms