RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 MAS1LP35410 378 aa7.49□□□□□ -1.21
RNF4-221ENST00000513643 TAS2R31P59538 309 aa7.49□□□□□ -1.21
RNF4-221ENST00000513643 FXYD4P59646 89 aa7.49□□□□□ -1.21
RNF4-221ENST00000513643 SSBP1Q04837 148 aaKnown RBP7.49□□□□□ -1.21
RNF4-221ENST00000513643 OR2B11Q5JQS5 317 aa7.49□□□□□ -1.21
RNF4-221ENST00000513643 LAX1Q8IWV1 398 aa7.49□□□□□ -1.21
RNF4-221ENST00000513643 SPAG16Q8N0X2 631 aa7.49□□□□□ -1.21
RNF4-221ENST00000513643 OR5T1Q8NG75 326 aa7.49□□□□□ -1.21
RNF4-221ENST00000513643 OR4A5Q8NH83 315 aa7.49□□□□□ -1.21
RNF4-221ENST00000513643 VSTM2AQ8TAG5 236 aa7.49□□□□□ -1.21
RNF4-221ENST00000513643 CD300LFQ8TDQ1 290 aa7.49□□□□□ -1.21
RNF4-221ENST00000513643 CASTOR1Q8WTX7 329 aa7.49□□□□□ -1.21
RNF4-221ENST00000513643 BORCS5Q969J3 196 aa7.49□□□□□ -1.21
RNF4-221ENST00000513643 ALX4Q9H161 411 aaPredicted RBP7.49□□□□□ -1.21
RNF4-221ENST00000513643 AURKAIP1Q9NWT8 199 aaPredicted RBP7.49□□□□□ -1.21
RNF4-221ENST00000513643 FAM25AB3EWG3 89 aa7.48□□□□□ -1.21
RNF4-221ENST00000513643 FAM25CB3EWG5 89 aa7.48□□□□□ -1.21
RNF4-221ENST00000513643 FAM25GB3EWG6 89 aa7.48□□□□□ -1.21
RNF4-221ENST00000513643 GABARAPH6UMI1 98 aa7.48□□□□□ -1.21
RNF4-221ENST00000513643 GPR31O00270 319 aa7.48□□□□□ -1.21
RNF4-221ENST00000513643 CREBL2O60519 120 aaPredicted RBP7.48□□□□□ -1.21
RNF4-221ENST00000513643 OR8U8P0C7N1 319 aa7.48□□□□□ -1.21
RNF4-221ENST00000513643 TBPP20226 339 aa7.48□□□□□ -1.21
RNF4-221ENST00000513643 F2RP25116 425 aa7.48□□□□□ -1.21
RNF4-221ENST00000513643 PTBP1P26599 531 aaKnown RBP eCLIP7.48□□□□□ -1.21
RNF4-221ENST00000513643 HERV-K104P61576 105 aa7.48□□□□□ -1.21
RNF4-221ENST00000513643 MRPS10P82664 201 aaKnown RBP7.48□□□□□ -1.21
RNF4-221ENST00000513643 ZNF45Q02386 682 aa7.48□□□□□ -1.21
RNF4-221ENST00000513643 ZNF616Q08AN1 781 aa7.48□□□□□ -1.21
RNF4-221ENST00000513643 C10orf55Q5SWW7 151 aa7.48□□□□□ -1.21
RNF4-221ENST00000513643 OR4A47Q6IF82 309 aa7.48□□□□□ -1.21
RNF4-221ENST00000513643 ZNF343Q6P1L6 599 aa7.48□□□□□ -1.21
RNF4-221ENST00000513643 TMEM17Q86X19 198 aa7.48□□□□□ -1.21
RNF4-221ENST00000513643 TMEM229BQ8NBD8 167 aa7.48□□□□□ -1.21
RNF4-221ENST00000513643 MRGPRFQ96AM1 343 aa7.48□□□□□ -1.21
RNF4-221ENST00000513643 DGCR14Q96DF8 476 aaKnown RBP7.48□□□□□ -1.21
RNF4-221ENST00000513643 USMG5Q96IX5 58 aa7.48□□□□□ -1.21
RNF4-221ENST00000513643 MS4A10Q96PG2 267 aa7.48□□□□□ -1.21
RNF4-221ENST00000513643 SPIN2AQ99865 258 aa7.48□□□□□ -1.21
RNF4-221ENST00000513643 SPIN2BQ9BPZ2 258 aa7.48□□□□□ -1.21
RNF4-221ENST00000513643 AIFM2Q9BRQ8 373 aa7.48□□□□□ -1.21
RNF4-221ENST00000513643 GPR61Q9BZJ8 451 aa7.48□□□□□ -1.21
RNF4-221ENST00000513643 SLC2A9Q9NRM0 540 aa7.48□□□□□ -1.21
RNF4-221ENST00000513643 COMMD9Q9P000 198 aa7.48□□□□□ -1.21
RNF4-221ENST00000513643 RABL2AQ9UBK7 228 aaPredicted RBP7.48□□□□□ -1.21
RNF4-221ENST00000513643 RABL2BQ9UNT1 228 aa7.48□□□□□ -1.21
RNF4-221ENST00000513643 DMRT1Q9Y5R6 373 aa7.48□□□□□ -1.21
RNF4-221ENST00000513643 HUWE1Q7Z6Z7 4374 aaKnown RBP7.48□□□□□ -1.21
RNF4-221ENST00000513643 SORL1Q92673 2214 aa7.47□□□□□ -1.21
RNF4-221ENST00000513643 IGHV4OR15-8A0A075B7B6 117 aa7.47□□□□□ -1.21
RNF4-221ENST00000513643 A0A087WW49 117 aa7.47□□□□□ -1.21
RNF4-221ENST00000513643 TRAV3A0A0B4J244 114 aa7.47□□□□□ -1.21
RNF4-221ENST00000513643 A0A0G2JLM5 398 aa7.47□□□□□ -1.21
RNF4-221ENST00000513643 NPIPB5A8MRT5 1133 aa7.47□□□□□ -1.21
RNF4-221ENST00000513643 K7EIL1 84 aa7.47□□□□□ -1.21
RNF4-221ENST00000513643 ZNF701M0R085 212 aaPredicted RBP7.47□□□□□ -1.21
RNF4-221ENST00000513643 UPK2O00526 184 aa7.47□□□□□ -1.21
RNF4-221ENST00000513643 S1PR2O95136 353 aa7.47□□□□□ -1.21
RNF4-221ENST00000513643 PRB2P02812 416 aaPredicted RBP7.47□□□□□ -1.21
RNF4-221ENST00000513643 TRGV3P03979 118 aa7.47□□□□□ -1.21
RNF4-221ENST00000513643 CD3DP04234 171 aa7.47□□□□□ -1.21
RNF4-221ENST00000513643 HSPB1P04792 205 aaKnown RBP7.47□□□□□ -1.21
RNF4-221ENST00000513643 OR9G9P0C7N8 305 aa7.47□□□□□ -1.21
RNF4-221ENST00000513643 NQO2P16083 231 aa7.47□□□□□ -1.21
RNF4-221ENST00000513643 OR2B8PP59922 312 aa7.47□□□□□ -1.21
RNF4-221ENST00000513643 RND3P61587 244 aa7.47□□□□□ -1.21
RNF4-221ENST00000513643 RPL8P62917 257 aaKnown RBP7.47□□□□□ -1.21
RNF4-221ENST00000513643 DGCR2P98153 550 aa7.47□□□□□ -1.21
RNF4-221ENST00000513643 CATR1Q13166 79 aa7.47□□□□□ -1.21
RNF4-221ENST00000513643 TNXAQ16473 311 aa7.47□□□□□ -1.21
RNF4-221ENST00000513643 LPCAT3Q6P1A2 487 aa7.47□□□□□ -1.21
RNF4-221ENST00000513643 ARRDC1Q8N5I2 433 aa7.47□□□□□ -1.21
RNF4-221ENST00000513643 OR4D10Q8NGI6 311 aa7.47□□□□□ -1.21
RNF4-221ENST00000513643 ABHD5Q8WTS1 349 aa7.47□□□□□ -1.21
RNF4-221ENST00000513643 SMIM4Q8WVI0 70 aa7.47□□□□□ -1.21
RNF4-221ENST00000513643 FCAMRQ8WWV6 532 aa7.47□□□□□ -1.21
RNF4-221ENST00000513643 DCUN1D4Q92564 292 aa7.47□□□□□ -1.21
RNF4-221ENST00000513643 DLX4Q92988 240 aaPredicted RBP7.47□□□□□ -1.21
RNF4-221ENST00000513643 OR5B12Q96R08 314 aa7.47□□□□□ -1.21
RNF4-221ENST00000513643 DCUN1D5Q9BTE7 237 aa7.47□□□□□ -1.21
RNF4-221ENST00000513643 LINC01619G3V211 115 aa7.46□□□□□ -1.22
RNF4-221ENST00000513643 M0QYG6 137 aa7.46□□□□□ -1.22
RNF4-221ENST00000513643 GSTZ1O43708 216 aaPredicted RBP7.46□□□□□ -1.22
RNF4-221ENST00000513643 IGKV1-39P01597 117 aa7.46□□□□□ -1.22
RNF4-221ENST00000513643 IGKV1D-39P04432 117 aa7.46□□□□□ -1.22
RNF4-221ENST00000513643 RLN1P04808 185 aa7.46□□□□□ -1.22
RNF4-221ENST00000513643 CTRB1P17538 263 aa7.46□□□□□ -1.22
RNF4-221ENST00000513643 HLA-GP17693 338 aa7.46□□□□□ -1.22
RNF4-221ENST00000513643 CD40LGP29965 261 aa7.46□□□□□ -1.22
RNF4-221ENST00000513643 TNFSF8P32971 234 aa7.46□□□□□ -1.22
RNF4-221ENST00000513643 INSL3P51460 131 aa7.46□□□□□ -1.22
RNF4-221ENST00000513643 TPPP2P59282 170 aa7.46□□□□□ -1.22
RNF4-221ENST00000513643 KLF5Q13887 457 aaPredicted RBP7.46□□□□□ -1.22
RNF4-221ENST00000513643 CTRB2Q6GPI1 263 aa7.46□□□□□ -1.22
RNF4-221ENST00000513643 IL34Q6ZMJ4 242 aa7.46□□□□□ -1.22
RNF4-221ENST00000513643 CMTM1Q8IZ96 169 aa7.46□□□□□ -1.22
RNF4-221ENST00000513643 SLC38A6Q8IZM9 456 aa7.46□□□□□ -1.22
RNF4-221ENST00000513643 OR51H1Q8NH63 302 aa7.46□□□□□ -1.22
RNF4-221ENST00000513643 TERB2Q8NHR7 220 aa7.46□□□□□ -1.22
RNF4-221ENST00000513643 ZNF486Q96H40 463 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms