RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 FKBP11Q9NYL4 201 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 PRNDQ9UKY0 176 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 POLQO75417 2590 aa6.81□□□□□ -1.32
RNF4-220ENST00000513578 ZNF705EA8MWA4 302 aaPredicted RBP6.81□□□□□ -1.32
RNF4-220ENST00000513578 INS-IGF2F8WCM5 200 aa6.81□□□□□ -1.32
RNF4-220ENST00000513578 I3L521 148 aa6.81□□□□□ -1.32
RNF4-220ENST00000513578 UPK2O00526 184 aa6.81□□□□□ -1.32
RNF4-220ENST00000513578 FBXO24O75426 580 aa6.81□□□□□ -1.32
RNF4-220ENST00000513578 NXPH3O95157 252 aa6.81□□□□□ -1.32
RNF4-220ENST00000513578 IFNA5P01569 189 aa6.81□□□□□ -1.32
RNF4-220ENST00000513578 IAPPP10997 89 aa6.81□□□□□ -1.32
RNF4-220ENST00000513578 ZP3P21754 424 aa6.81□□□□□ -1.32
RNF4-220ENST00000513578 GPR6P46095 362 aaPredicted RBP6.81□□□□□ -1.32
RNF4-220ENST00000513578 RAB13P51153 203 aa6.81□□□□□ -1.32
RNF4-220ENST00000513578 F2RL1P55085 397 aa6.81□□□□□ -1.32
RNF4-220ENST00000513578 ERVFRD-1P60508 538 aa6.81□□□□□ -1.32
RNF4-220ENST00000513578 PJVKQ0ZLH3 352 aa6.81□□□□□ -1.32
RNF4-220ENST00000513578 LRRC75BQ2VPJ9 315 aa6.81□□□□□ -1.32
RNF4-220ENST00000513578 HLA-DRB5Q30154 266 aa6.81□□□□□ -1.32
RNF4-220ENST00000513578 AVPI1Q5T686 147 aa6.81□□□□□ -1.32
RNF4-220ENST00000513578 OR4A47Q6IF82 309 aa6.81□□□□□ -1.32
RNF4-220ENST00000513578 KIR3DL3Q8N743 410 aa6.81□□□□□ -1.32
RNF4-220ENST00000513578 OR13D1Q8NGV5 346 aa6.81□□□□□ -1.32
RNF4-220ENST00000513578 OR10X1Q8NGY0 326 aa6.81□□□□□ -1.32
RNF4-220ENST00000513578 PINX1Q96BK5 328 aaKnown RBP6.81□□□□□ -1.32
RNF4-220ENST00000513578 OR4C12Q96R67 309 aa6.81□□□□□ -1.32
RNF4-220ENST00000513578 CLCC1Q96S66 551 aa6.81□□□□□ -1.32
RNF4-220ENST00000513578 GGACTQ9BVM4 153 aa6.81□□□□□ -1.32
RNF4-220ENST00000513578 CLEC7AQ9BXN2 247 aa6.81□□□□□ -1.32
RNF4-220ENST00000513578 QTRT1Q9BXR0 403 aaKnown RBP6.81□□□□□ -1.32
RNF4-220ENST00000513578 MRPL20Q9BYC9 149 aaKnown RBP6.81□□□□□ -1.32
RNF4-220ENST00000513578 UNKLQ9H9P5 680 aaKnown RBP6.81□□□□□ -1.32
RNF4-220ENST00000513578 UBTD1Q9HAC8 227 aa6.81□□□□□ -1.32
RNF4-220ENST00000513578 WASHC3Q9Y3C0 194 aa6.81□□□□□ -1.32
RNF4-220ENST00000513578 AMMECR1Q9Y4X0 333 aaPredicted RBP6.81□□□□□ -1.32
RNF4-220ENST00000513578 TIMM9Q9Y5J7 89 aa6.81□□□□□ -1.32
RNF4-220ENST00000513578 IGHV2-26A0A0B4J1V2 119 aa6.8□□□□□ -1.32
RNF4-220ENST00000513578 CEBPZOSA8MTT3 80 aa6.8□□□□□ -1.32
RNF4-220ENST00000513578 LY6LH3BQJ8 138 aa6.8□□□□□ -1.32
RNF4-220ENST00000513578 SOX15O60248 233 aa6.8□□□□□ -1.32
RNF4-220ENST00000513578 KBTBD11O94819 623 aa6.8□□□□□ -1.32
RNF4-220ENST00000513578 METTL15P1P0C7V9 234 aa6.8□□□□□ -1.32
RNF4-220ENST00000513578 MDKP21741 143 aaPredicted RBP6.8□□□□□ -1.32
RNF4-220ENST00000513578 LGALS7P47929 136 aa6.8□□□□□ -1.32
RNF4-220ENST00000513578 SERF2P84101 59 aa6.8□□□□□ -1.32
RNF4-220ENST00000513578 SLC38A11Q08AI6 406 aa6.8□□□□□ -1.32
RNF4-220ENST00000513578 ARL16Q0P5N6 197 aa6.8□□□□□ -1.32
RNF4-220ENST00000513578 TMEM267Q0VDI3 215 aaPredicted RBP6.8□□□□□ -1.32
RNF4-220ENST00000513578 CLINT1Q14677 625 aa6.8□□□□□ -1.32
RNF4-220ENST00000513578 SPANXN5Q5MJ07 72 aa6.8□□□□□ -1.32
RNF4-220ENST00000513578 PXDC1Q5TGL8 231 aa6.8□□□□□ -1.32
RNF4-220ENST00000513578 DMRTA1Q5VZB9 504 aa6.8□□□□□ -1.32
RNF4-220ENST00000513578 SP5Q6BEB4 398 aaPredicted RBP6.8□□□□□ -1.32
RNF4-220ENST00000513578 TGIF2LXQ8IUE1 241 aa6.8□□□□□ -1.32
RNF4-220ENST00000513578 TMEM217Q8N7C4 229 aa6.8□□□□□ -1.32
RNF4-220ENST00000513578 HSD17B11Q8NBQ5 300 aa6.8□□□□□ -1.32
RNF4-220ENST00000513578 OR11H6Q8NGC7 330 aa6.8□□□□□ -1.32
RNF4-220ENST00000513578 OR10P1Q8NGE3 313 aa6.8□□□□□ -1.32
RNF4-220ENST00000513578 OR4C13Q8NGP0 309 aa6.8□□□□□ -1.32
RNF4-220ENST00000513578 OR2G3Q8NGZ4 309 aa6.8□□□□□ -1.32
RNF4-220ENST00000513578 VSTM2AQ8TAG5 236 aa6.8□□□□□ -1.32
RNF4-220ENST00000513578 TMEM167AQ8TBQ9 72 aa6.8□□□□□ -1.32
RNF4-220ENST00000513578 LHX4Q969G2 390 aa6.8□□□□□ -1.32
RNF4-220ENST00000513578 RNF5Q99942 180 aa6.8□□□□□ -1.32
RNF4-220ENST00000513578 TMEM147Q9BVK8 224 aa6.8□□□□□ -1.32
RNF4-220ENST00000513578 SSBP3Q9BWW4 388 aaPredicted RBP6.8□□□□□ -1.32
RNF4-220ENST00000513578 WDR61Q9GZS3 305 aaKnown RBP6.8□□□□□ -1.32
RNF4-220ENST00000513578 TCF19Q9Y242 345 aa6.8□□□□□ -1.32
RNF4-220ENST00000513578 LOC105371242A0A075B767 164 aa6.79□□□□□ -1.32
RNF4-220ENST00000513578 TRAV3A0A0B4J244 114 aa6.79□□□□□ -1.32
RNF4-220ENST00000513578 A0A1B0GW64 132 aa6.79□□□□□ -1.32
RNF4-220ENST00000513578 BTBD17A6NE02 478 aa6.79□□□□□ -1.32
RNF4-220ENST00000513578 C15orf62A8K5M9 175 aa6.79□□□□□ -1.32
RNF4-220ENST00000513578 C22orf46C9J442 243 aa6.79□□□□□ -1.32
RNF4-220ENST00000513578 FNDC10F2Z333 226 aa6.79□□□□□ -1.32
RNF4-220ENST00000513578 H3BP45 60 aa6.79□□□□□ -1.32
RNF4-220ENST00000513578 BUB1B-PAK6H3BSN5 160 aa6.79□□□□□ -1.32
RNF4-220ENST00000513578 RBMXL2O75526 392 aaKnown RBP6.79□□□□□ -1.32
RNF4-220ENST00000513578 IFNA17P01571 189 aa6.79□□□□□ -1.32
RNF4-220ENST00000513578 USF1P22415 310 aaPredicted RBP6.79□□□□□ -1.32
RNF4-220ENST00000513578 PRTN3P24158 256 aa6.79□□□□□ -1.32
RNF4-220ENST00000513578 PRCDQ00LT1 54 aa6.79□□□□□ -1.32
RNF4-220ENST00000513578 Q6ZRG5 221 aa6.79□□□□□ -1.32
RNF4-220ENST00000513578 Q8N7P7 452 aa6.79□□□□□ -1.32
RNF4-220ENST00000513578 LFNGQ8NES3 379 aa6.79□□□□□ -1.32
RNF4-220ENST00000513578 OR5B3Q8NH48 314 aa6.79□□□□□ -1.32
RNF4-220ENST00000513578 SCGB1C1Q8TD33 95 aa6.79□□□□□ -1.32
RNF4-220ENST00000513578 ZDHHC16Q969W1 377 aa6.79□□□□□ -1.32
RNF4-220ENST00000513578 FLYWCH2Q96CP2 140 aaKnown RBP6.79□□□□□ -1.32
RNF4-220ENST00000513578 SH3BGRL3Q9H299 93 aa6.79□□□□□ -1.32
RNF4-220ENST00000513578 NUP50Q9UKX7 468 aa6.79□□□□□ -1.32
RNF4-220ENST00000513578 POLR3KQ9Y2Y1 108 aaPredicted RBP6.79□□□□□ -1.32
RNF4-220ENST00000513578 NAV3Q8IVL0 2385 aa6.79□□□□□ -1.32
RNF4-220ENST00000513578 TRAV1-1A0A0B4J248 108 aa6.78□□□□□ -1.32
RNF4-220ENST00000513578 SRRM4A7MD48 611 aaKnown RBP6.78□□□□□ -1.32
RNF4-220ENST00000513578 PRSS46E5RG02 174 aa6.78□□□□□ -1.32
RNF4-220ENST00000513578 LY6HO94772 140 aa6.78□□□□□ -1.32
RNF4-220ENST00000513578 IGLV2-23P01705 113 aa6.78□□□□□ -1.32
RNF4-220ENST00000513578 IGHV2-5P01817 119 aa6.78□□□□□ -1.32
RNF4-220ENST00000513578 IGKV1-16P04430 117 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms