RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 RAB18Q9NP72 206 aa9.99□□□□□ -0.81
PDPN-210ENST00000513143 TMEM140Q9NV12 185 aa9.99□□□□□ -0.81
PDPN-210ENST00000513143 BET1LQ9NYM9 111 aa9.99□□□□□ -0.81
PDPN-210ENST00000513143 METTL1Q9UBP6 276 aaKnown RBP9.99□□□□□ -0.81
PDPN-210ENST00000513143 VPREB3Q9UKI3 123 aa9.99□□□□□ -0.81
PDPN-210ENST00000513143 SIGLEC9Q9Y336 463 aa9.99□□□□□ -0.81
PDPN-210ENST00000513143 TMED3Q9Y3Q3 217 aa9.99□□□□□ -0.81
PDPN-210ENST00000513143 NCBP2LA6PVI3 153 aaKnown RBP9.98□□□□□ -0.81
PDPN-210ENST00000513143 FGF16O43320 207 aa9.98□□□□□ -0.81
PDPN-210ENST00000513143 SSNA1O43805 119 aa9.98□□□□□ -0.81
PDPN-210ENST00000513143 ADAP1O75689 374 aa9.98□□□□□ -0.81
PDPN-210ENST00000513143 OR2A4O95047 310 aa9.98□□□□□ -0.81
PDPN-210ENST00000513143 C5orf64Q2M2E5 130 aa9.98□□□□□ -0.81
PDPN-210ENST00000513143 GGNBP1Q5YKI7 109 aa9.98□□□□□ -0.81
PDPN-210ENST00000513143 H2BFWTQ7Z2G1 175 aa9.98□□□□□ -0.81
PDPN-210ENST00000513143 FAM71E2Q8N5Q1 922 aa9.98□□□□□ -0.81
PDPN-210ENST00000513143 OR4A5Q8NH83 315 aa9.98□□□□□ -0.81
PDPN-210ENST00000513143 TMEM167AQ8TBQ9 72 aa9.98□□□□□ -0.81
PDPN-210ENST00000513143 GPR146Q96CH1 333 aa9.98□□□□□ -0.81
PDPN-210ENST00000513143 OR2A7Q96R45 310 aa9.98□□□□□ -0.81
PDPN-210ENST00000513143 ESM1Q9NQ30 184 aa9.98□□□□□ -0.81
PDPN-210ENST00000513143 KIAA1456Q9P272 454 aa9.98□□□□□ -0.81
PDPN-210ENST00000513143 MOB4Q9Y3A3 225 aa9.98□□□□□ -0.81
PDPN-210ENST00000513143 TET2Q6N021 2002 aaPredicted RBP9.97□□□□□ -0.81
PDPN-210ENST00000513143 TEP1Q99973 2627 aaKnown RBP9.97□□□□□ -0.81
PDPN-210ENST00000513143 DNAJC9-AS1A6NH13 148 aa9.97□□□□□ -0.81
PDPN-210ENST00000513143 CLDN34H7C241 214 aa9.97□□□□□ -0.81
PDPN-210ENST00000513143 M0QZK8 103 aa9.97□□□□□ -0.81
PDPN-210ENST00000513143 UPK2O00526 184 aa9.97□□□□□ -0.81
PDPN-210ENST00000513143 CHST1O43916 411 aa9.97□□□□□ -0.81
PDPN-210ENST00000513143 KBTBD11O94819 623 aa9.97□□□□□ -0.81
PDPN-210ENST00000513143 IFNA21P01568 189 aa9.97□□□□□ -0.81
PDPN-210ENST00000513143 OR9G9P0C7N8 305 aa9.97□□□□□ -0.81
PDPN-210ENST00000513143 SLC25A6P12236 298 aa9.97□□□□□ -0.81
PDPN-210ENST00000513143 HILS1P60008 231 aa9.97□□□□□ -0.81
PDPN-210ENST00000513143 IZUMO4Q1ZYL8 232 aa9.97□□□□□ -0.81
PDPN-210ENST00000513143 MRGPRG-AS1Q2M3A8 158 aa9.97□□□□□ -0.81
PDPN-210ENST00000513143 C2orf68Q2NKX9 166 aa9.97□□□□□ -0.81
PDPN-210ENST00000513143 Q6ZRM9 215 aa9.97□□□□□ -0.81
PDPN-210ENST00000513143 PPP1R27Q86WC6 154 aa9.97□□□□□ -0.81
PDPN-210ENST00000513143 C5orf56Q8N8D9 126 aa9.97□□□□□ -0.81
PDPN-210ENST00000513143 RNASE11Q8TAA1 199 aaKnown RBP9.97□□□□□ -0.81
PDPN-210ENST00000513143 CHIAQ9BZP6 476 aa9.97□□□□□ -0.81
PDPN-210ENST00000513143 MED28Q9H204 178 aa9.97□□□□□ -0.81
PDPN-210ENST00000513143 FBXL15Q9H469 300 aa9.97□□□□□ -0.81
PDPN-210ENST00000513143 TPSG1Q9NRR2 321 aa9.97□□□□□ -0.81
PDPN-210ENST00000513143 TNFRSF19Q9NS68 423 aa9.97□□□□□ -0.81
PDPN-210ENST00000513143 TRAV3A0A0B4J244 114 aa9.96□□□□□ -0.82
PDPN-210ENST00000513143 A0A1B0GU03 582 aa9.96□□□□□ -0.82
PDPN-210ENST00000513143 MPTX1A8MV57 137 aa9.96□□□□□ -0.82
PDPN-210ENST00000513143 CCSO14618 274 aa9.96□□□□□ -0.82
PDPN-210ENST00000513143 AMY1AP04745 511 aa9.96□□□□□ -0.82
PDPN-210ENST00000513143 FGF2P09038 288 aa9.96□□□□□ -0.82
PDPN-210ENST00000513143 RRAS2P62070 204 aaPredicted RBP9.96□□□□□ -0.82
PDPN-210ENST00000513143 RELBQ01201 579 aa9.96□□□□□ -0.82
PDPN-210ENST00000513143 PRSS8Q16651 343 aa9.96□□□□□ -0.82
PDPN-210ENST00000513143 DUX5Q96PT3 197 aa9.96□□□□□ -0.82
PDPN-210ENST00000513143 JMJD8Q96S16 334 aa9.96□□□□□ -0.82
PDPN-210ENST00000513143 RANBP3Q9H6Z4 567 aaPredicted RBP9.96□□□□□ -0.82
PDPN-210ENST00000513143 COA4Q9NYJ1 87 aa9.96□□□□□ -0.82
PDPN-210ENST00000513143 A0A1B0GVG6 124 aa9.95□□□□□ -0.82
PDPN-210ENST00000513143 FCN1O00602 326 aa9.95□□□□□ -0.82
PDPN-210ENST00000513143 GOSR2O14653 212 aa9.95□□□□□ -0.82
PDPN-210ENST00000513143 SNAPC5O75971 98 aa9.95□□□□□ -0.82
PDPN-210ENST00000513143 SULT1A3P0DMM9 295 aa9.95□□□□□ -0.82
PDPN-210ENST00000513143 SULT1A4P0DMN0 295 aa9.95□□□□□ -0.82
PDPN-210ENST00000513143 RPL8P62917 257 aaKnown RBP9.95□□□□□ -0.82
PDPN-210ENST00000513143 PJVKQ0ZLH3 352 aa9.95□□□□□ -0.82
PDPN-210ENST00000513143 SMCO1Q147U7 214 aa9.95□□□□□ -0.82
PDPN-210ENST00000513143 PLGLAQ15195 96 aa9.95□□□□□ -0.82
PDPN-210ENST00000513143 FCN2Q15485 313 aa9.95□□□□□ -0.82
PDPN-210ENST00000513143 FOXRED2Q8IWF2 684 aa9.95□□□□□ -0.82
PDPN-210ENST00000513143 MMD2Q8IY49 270 aa9.95□□□□□ -0.82
PDPN-210ENST00000513143 OR5M8Q8NGP6 311 aa9.95□□□□□ -0.82
PDPN-210ENST00000513143 OR10C1Q96KK4 312 aa9.95□□□□□ -0.82
PDPN-210ENST00000513143 SPIN2AQ99865 258 aa9.95□□□□□ -0.82
PDPN-210ENST00000513143 RASL11BQ9BPW5 248 aa9.95□□□□□ -0.82
PDPN-210ENST00000513143 SPIN2BQ9BPZ2 258 aa9.95□□□□□ -0.82
PDPN-210ENST00000513143 ZNF430Q9H8G1 570 aaPredicted RBP9.95□□□□□ -0.82
PDPN-210ENST00000513143 TMEM14BQ9NUH8 114 aa9.95□□□□□ -0.82
PDPN-210ENST00000513143 MGAT4CQ9UBM8 478 aa9.95□□□□□ -0.82
PDPN-210ENST00000513143 CACNG5Q9UF02 275 aa9.95□□□□□ -0.82
PDPN-210ENST00000513143 NSG2Q9Y328 171 aa9.95□□□□□ -0.82
PDPN-210ENST00000513143 C13orf42A0A1B0GVH6 325 aa9.94□□□□□ -0.82
PDPN-210ENST00000513143 C5orf51A6NDU8 294 aa9.94□□□□□ -0.82
PDPN-210ENST00000513143 C15orf61A6NNL5 157 aa9.94□□□□□ -0.82
PDPN-210ENST00000513143 GPR137BO60478 399 aa9.94□□□□□ -0.82
PDPN-210ENST00000513143 PITX3O75364 302 aa9.94□□□□□ -0.82
PDPN-210ENST00000513143 HLA-DRB1P01911 266 aa9.94□□□□□ -0.82
PDPN-210ENST00000513143 CXCL3P19876 107 aa9.94□□□□□ -0.82
PDPN-210ENST00000513143 MAS1LP35410 378 aa9.94□□□□□ -0.82
PDPN-210ENST00000513143 AARDQ4LEZ3 155 aa9.94□□□□□ -0.82
PDPN-210ENST00000513143 THOC7Q6I9Y2 204 aaKnown RBP9.94□□□□□ -0.82
PDPN-210ENST00000513143 GSG1LQ6UXU4 331 aa9.94□□□□□ -0.82
PDPN-210ENST00000513143 ZNF429Q86V71 674 aa9.94□□□□□ -0.82
PDPN-210ENST00000513143 OR11H7Q8NGC8 314 aa9.94□□□□□ -0.82
PDPN-210ENST00000513143 OR4A16Q8NH70 328 aa9.94□□□□□ -0.82
PDPN-210ENST00000513143 CLCC1Q96S66 551 aa9.94□□□□□ -0.82
PDPN-210ENST00000513143 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.94□□□□□ -0.82
PDPN-210ENST00000513143 PRNDQ9UKY0 176 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms